RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 DCAF8L2P0C7V8 631 aa33.05■■■□□ 2.88
AC008878.3-201ENST00000617428 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
AC008878.3-201ENST00000617428 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
AC008878.3-201ENST00000617428 SHROOM4Q9ULL8 1493 aa30.54■■■□□ 2.48
AC008878.3-201ENST00000617428 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
AC008878.3-201ENST00000617428 APLP2Q06481 763 aa29.36■■■□□ 2.29
AC008878.3-201ENST00000617428 FAM9AQ8IZU1 332 aaPredicted RBP29.31■■■□□ 2.28
AC008878.3-201ENST00000617428 TTBK1Q5TCY1 1321 aaPredicted RBP28.97■■■□□ 2.23
AC008878.3-201ENST00000617428 RANGAP1P46060 587 aaPredicted RBP28.87■■■□□ 2.21
AC008878.3-201ENST00000617428 TRIM41Q8WV44 630 aa28.69■■■□□ 2.18
AC008878.3-201ENST00000617428 ATP1B4Q9UN42 357 aaPredicted RBP28.59■■■□□ 2.17
AC008878.3-201ENST00000617428 PCGF6Q9BYE7 350 aa28.54■■■□□ 2.16
AC008878.3-201ENST00000617428 PELP1Q8IZL8 1130 aaKnown RBP28.45■■■□□ 2.14
AC008878.3-201ENST00000617428 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
AC008878.3-201ENST00000617428 CCER1Q8TC90 406 aaPredicted RBP28.12■■■□□ 2.09
AC008878.3-201ENST00000617428 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
AC008878.3-201ENST00000617428 ZEB1P37275 1124 aaPredicted RBP27.84■■■□□ 2.05
AC008878.3-201ENST00000617428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.68■■■□□ 2.02
AC008878.3-201ENST00000617428 HNRNPUL2Q1KMD3 747 aaKnown RBP27.68■■■□□ 2.02
AC008878.3-201ENST00000617428 CENPBP07199 599 aaPredicted RBP27.65■■■□□ 2.02
AC008878.3-201ENST00000617428 MYT1LQ9UL68 1186 aa27.58■■■□□ 2.01
AC008878.3-201ENST00000617428 ITGAEP38570 1179 aa27.52■■■□□ 2
AC008878.3-201ENST00000617428 PABPN1Q86U42 306 aaKnown RBP eCLIP27.4■■□□□ 1.98
AC008878.3-201ENST00000617428 LOC105371045A0A1W2PR82 267 aa27.38■■□□□ 1.97
AC008878.3-201ENST00000617428 ABCC9O60706 1549 aa27.37■■□□□ 1.97
AC008878.3-201ENST00000617428 YTHDC1Q96MU7 727 aaKnown RBP27.34■■□□□ 1.97
AC008878.3-201ENST00000617428 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
AC008878.3-201ENST00000617428 TRIM26Q12899 539 aaPredicted RBP27.29■■□□□ 1.96
AC008878.3-201ENST00000617428 ERICH6Q7L0X2 663 aa27.28■■□□□ 1.96
AC008878.3-201ENST00000617428 NEFLP07196 543 aa27.24■■□□□ 1.95
AC008878.3-201ENST00000617428 POLR3GLQ9BT43 218 aa27.19■■□□□ 1.94
AC008878.3-201ENST00000617428 CNGB1Q14028 1251 aaPredicted RBP26.97■■□□□ 1.91
AC008878.3-201ENST00000617428 HRCP23327 699 aa26.82■■□□□ 1.88
AC008878.3-201ENST00000617428 FAM50AQ14320 339 aaKnown RBP26.79■■□□□ 1.88
AC008878.3-201ENST00000617428 FBLN2P98095 1184 aa26.77■■□□□ 1.88
AC008878.3-201ENST00000617428 SLC4A1APQ9BWU0 796 aaKnown RBP26.75■■□□□ 1.87
AC008878.3-201ENST00000617428 TRIM52Q96A61 297 aa26.64■■□□□ 1.85
AC008878.3-201ENST00000617428 NEUROD1Q13562 356 aa26.45■■□□□ 1.82
AC008878.3-201ENST00000617428 DAXXQ9UER7 740 aaPredicted RBP26.41■■□□□ 1.82
AC008878.3-201ENST00000617428 ARID3CA6NKF2 412 aa26.39■■□□□ 1.82
AC008878.3-201ENST00000617428 P3H3Q8IVL6 736 aa26.39■■□□□ 1.82
AC008878.3-201ENST00000617428 ZNF326Q5BKZ1 582 aaKnown RBP26.35■■□□□ 1.81
AC008878.3-201ENST00000617428 DIEXFQ68CQ4 756 aaKnown RBP26.26■■□□□ 1.79
AC008878.3-201ENST00000617428 CSRNP3Q8WYN3 585 aa26.25■■□□□ 1.79
AC008878.3-201ENST00000617428 ZNF777Q9ULD5 760 aaPredicted RBP26.12■■□□□ 1.77
AC008878.3-201ENST00000617428 CLSPNQ9HAW4 1339 aa26.11■■□□□ 1.77
AC008878.3-201ENST00000617428 SCRIBQ14160 1630 aa26.07■■□□□ 1.76
AC008878.3-201ENST00000617428 BCANQ96GW7 911 aa26.06■■□□□ 1.76
AC008878.3-201ENST00000617428 CDK11AQ9UQ88 783 aaPredicted RBP26■■□□□ 1.75
AC008878.3-201ENST00000617428 ANP32CO43423 234 aa25.94■■□□□ 1.74
AC008878.3-201ENST00000617428 SLC24A1O60721 1099 aa25.84■■□□□ 1.73
AC008878.3-201ENST00000617428 ESF1Q9H501 851 aaKnown RBP25.84■■□□□ 1.73
AC008878.3-201ENST00000617428 NPM1P06748 294 aaKnown RBP eCLIP25.82■■□□□ 1.72
AC008878.3-201ENST00000617428 ZNF316A6NFI3 1004 aaPredicted RBP25.77■■□□□ 1.72
AC008878.3-201ENST00000617428 PLPPR3Q6T4P5 718 aa25.73■■□□□ 1.71
AC008878.3-201ENST00000617428 CHGAP10645 457 aaKnown RBP25.73■■□□□ 1.71
AC008878.3-201ENST00000617428 NEFMP07197 916 aa25.7■■□□□ 1.7
AC008878.3-201ENST00000617428 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
AC008878.3-201ENST00000617428 ZBTB47Q9UFB7 747 aaPredicted RBP25.69■■□□□ 1.7
AC008878.3-201ENST00000617428 BCL11AQ9H165 835 aa25.68■■□□□ 1.7
AC008878.3-201ENST00000617428 STAG3Q9UJ98 1225 aa25.67■■□□□ 1.7
AC008878.3-201ENST00000617428 CANXP27824 592 aaKnown RBP25.61■■□□□ 1.69
AC008878.3-201ENST00000617428 MYT1Q01538 1121 aa25.61■■□□□ 1.69
AC008878.3-201ENST00000617428 RTL5Q5HYW3 569 aaPredicted RBP25.58■■□□□ 1.69
AC008878.3-201ENST00000617428 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
AC008878.3-201ENST00000617428 CHIC2Q9UKJ5 165 aa25.57■■□□□ 1.68
AC008878.3-201ENST00000617428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.53■■□□□ 1.68
AC008878.3-201ENST00000617428 TONSLQ96HA7 1378 aa25.49■■□□□ 1.67
AC008878.3-201ENST00000617428 GTF3C3Q9Y5Q9 886 aa25.47■■□□□ 1.67
AC008878.3-201ENST00000617428 TSPY4P0CV99 314 aa25.45■■□□□ 1.66
AC008878.3-201ENST00000617428 TSPY10P0CW01 314 aa25.45■■□□□ 1.66
AC008878.3-201ENST00000617428 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
AC008878.3-201ENST00000617428 KCNH8Q96L42 1107 aa25.29■■□□□ 1.64
AC008878.3-201ENST00000617428 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
AC008878.3-201ENST00000617428 DDX10Q13206 875 aaKnown RBP25.27■■□□□ 1.64
AC008878.3-201ENST00000617428 RB1CC1Q8TDY2 1594 aa25.25■■□□□ 1.63
AC008878.3-201ENST00000617428 CCDC180Q9P1Z9 1646 aa25.22■■□□□ 1.63
AC008878.3-201ENST00000617428 SALL2Q9Y467 1007 aaPredicted RBP25.21■■□□□ 1.63
AC008878.3-201ENST00000617428 FAM9BQ8IZU0 186 aa25.2■■□□□ 1.62
AC008878.3-201ENST00000617428 CLIP1P30622 1438 aa25.18■■□□□ 1.62
AC008878.3-201ENST00000617428 PLEKHD1A6NEE1 506 aa25.16■■□□□ 1.62
AC008878.3-201ENST00000617428 HNRNPUQ00839 825 aaKnown RBP eCLIP25.16■■□□□ 1.62
AC008878.3-201ENST00000617428 SENP3Q9H4L4 574 aaPredicted RBP25.15■■□□□ 1.62
AC008878.3-201ENST00000617428 RRP7BPQ9NSQ0 103 aa25.14■■□□□ 1.62
AC008878.3-201ENST00000617428 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
AC008878.3-201ENST00000617428 TMC1Q8TDI8 760 aa25.1■■□□□ 1.61
AC008878.3-201ENST00000617428 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
AC008878.3-201ENST00000617428 SCAF1Q9H7N4 1312 aaKnown RBP25.05■■□□□ 1.6
AC008878.3-201ENST00000617428 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
AC008878.3-201ENST00000617428 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
AC008878.3-201ENST00000617428 HIRIP3Q9BW71 556 aaPredicted RBP25.02■■□□□ 1.6
AC008878.3-201ENST00000617428 NPM2Q86SE8 214 aaKnown RBP25■■□□□ 1.59
AC008878.3-201ENST00000617428 PPP1R15AO75807 674 aaPredicted RBP25■■□□□ 1.59
AC008878.3-201ENST00000617428 WRNQ14191 1432 aaPredicted RBP eCLIP24.99■■□□□ 1.59
AC008878.3-201ENST00000617428 PLEKHG5O94827 1062 aa24.98■■□□□ 1.59
AC008878.3-201ENST00000617428 FKBP8Q14318 412 aa24.98■■□□□ 1.59
AC008878.3-201ENST00000617428 WDR43Q15061 677 aaKnown RBP eCLIP24.96■■□□□ 1.59
AC008878.3-201ENST00000617428 RGL3Q3MIN7 710 aa24.96■■□□□ 1.59
AC008878.3-201ENST00000617428 ANP32AP39687 249 aaKnown RBP24.95■■□□□ 1.58
AC008878.3-201ENST00000617428 CFDP1Q9UEE9 299 aaPredicted RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms