RNA–Protein interactions for RNA: ENST00000361720.9

GPATCH3-201, Transcript of G-patch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH3, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-201ENST00000361720 NISCHQ9Y2I1 1504 aa42.29■■■■■ 4.36
GPATCH3-201ENST00000361720 CCDC180Q9P1Z9 1646 aa37.04■■■■□ 3.52
GPATCH3-201ENST00000361720 ABCC9O60706 1549 aa35.53■■■■□ 3.28
GPATCH3-201ENST00000361720 ZCCHC6Q5VYS8 1495 aaKnown RBP35.45■■■■□ 3.27
GPATCH3-201ENST00000361720 DCAF8L2P0C7V8 631 aa35.13■■■■□ 3.21
GPATCH3-201ENST00000361720 DCAF1Q9Y4B6 1507 aa34.87■■■■□ 3.17
GPATCH3-201ENST00000361720 MYO15BQ96JP2 1530 aa34.58■■■■□ 3.13
GPATCH3-201ENST00000361720 NACADO15069 1562 aa34.57■■■■□ 3.12
GPATCH3-201ENST00000361720 RB1CC1Q8TDY2 1594 aa34.39■■■■□ 3.1
GPATCH3-201ENST00000361720 SHROOM4Q9ULL8 1493 aa34.35■■■■□ 3.09
GPATCH3-201ENST00000361720 SCRIBQ14160 1630 aa34.14■■■■□ 3.06
GPATCH3-201ENST00000361720 UNC13AQ9UPW8 1703 aa33.86■■■■□ 3.01
GPATCH3-201ENST00000361720 BICRAQ9NZM4 1560 aa33.48■■■□□ 2.95
GPATCH3-201ENST00000361720 PABPN1Q86U42 306 aaKnown RBP eCLIP33.44■■■□□ 2.94
GPATCH3-201ENST00000361720 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
GPATCH3-201ENST00000361720 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
GPATCH3-201ENST00000361720 MROH2BQ7Z745 1585 aa32.73■■■□□ 2.83
GPATCH3-201ENST00000361720 RSF1Q96T23 1441 aaPredicted RBP32.67■■■□□ 2.82
GPATCH3-201ENST00000361720 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
GPATCH3-201ENST00000361720 SMARCA4P51532 1647 aa32.63■■■□□ 2.81
GPATCH3-201ENST00000361720 WIZO95785 1651 aa32.47■■■□□ 2.79
GPATCH3-201ENST00000361720 EIF4G1Q04637 1599 aaKnown RBP32.46■■■□□ 2.79
GPATCH3-201ENST00000361720 PEG3Q9GZU2 1588 aa32.18■■■□□ 2.74
GPATCH3-201ENST00000361720 ATAD2BQ9ULI0 1458 aa32.18■■■□□ 2.74
GPATCH3-201ENST00000361720 CC2D2AQ9P2K1 1620 aa32.12■■■□□ 2.73
GPATCH3-201ENST00000361720 SMARCA2P51531 1590 aa32.09■■■□□ 2.73
GPATCH3-201ENST00000361720 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
GPATCH3-201ENST00000361720 BAZ1BQ9UIG0 1483 aaKnown RBP31.96■■■□□ 2.71
GPATCH3-201ENST00000361720 NCAPD3P42695 1498 aa31.92■■■□□ 2.7
GPATCH3-201ENST00000361720 HMGXB3Q12766 1538 aa31.84■■■□□ 2.69
GPATCH3-201ENST00000361720 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
GPATCH3-201ENST00000361720 CCDC88BA6NC98 1476 aa31.72■■■□□ 2.67
GPATCH3-201ENST00000361720 CFTRP13569 1480 aa31.12■■■□□ 2.57
GPATCH3-201ENST00000361720 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
GPATCH3-201ENST00000361720 NESP48681 1621 aa31.09■■■□□ 2.57
GPATCH3-201ENST00000361720 CADPSQ9ULU8 1353 aa31.08■■■□□ 2.57
GPATCH3-201ENST00000361720 ABCC8Q09428 1581 aa31■■■□□ 2.55
GPATCH3-201ENST00000361720 PRDM2Q13029 1718 aa30.97■■■□□ 2.55
GPATCH3-201ENST00000361720 LAMC3Q9Y6N6 1575 aa30.91■■■□□ 2.54
GPATCH3-201ENST00000361720 FANCD2Q9BXW9 1451 aa30.78■■■□□ 2.52
GPATCH3-201ENST00000361720 TRIM41Q8WV44 630 aa30.75■■■□□ 2.51
GPATCH3-201ENST00000361720 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
GPATCH3-201ENST00000361720 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
GPATCH3-201ENST00000361720 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
GPATCH3-201ENST00000361720 PDS5BQ9NTI5 1447 aa30.65■■■□□ 2.5
GPATCH3-201ENST00000361720 CUX1P39880 1505 aa30.62■■■□□ 2.49
GPATCH3-201ENST00000361720 CEP164Q9UPV0 1460 aa30.61■■■□□ 2.49
GPATCH3-201ENST00000361720 TOP2BQ02880 1626 aa30.54■■■□□ 2.48
GPATCH3-201ENST00000361720 BIVM-ERCC5R4GMW8 1640 aa30.53■■■□□ 2.48
GPATCH3-201ENST00000361720 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
GPATCH3-201ENST00000361720 ERCC6Q03468 1493 aa30.43■■■□□ 2.46
GPATCH3-201ENST00000361720 TOPBP1Q92547 1522 aa30.41■■■□□ 2.46
GPATCH3-201ENST00000361720 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
GPATCH3-201ENST00000361720 MRC2Q9UBG0 1479 aa30.34■■■□□ 2.45
GPATCH3-201ENST00000361720 FGD5Q6ZNL6 1462 aa30.33■■■□□ 2.45
GPATCH3-201ENST00000361720 FAM9AQ8IZU1 332 aaPredicted RBP30.31■■■□□ 2.44
GPATCH3-201ENST00000361720 SOGA1O94964 1423 aa30.29■■■□□ 2.44
GPATCH3-201ENST00000361720 THOC2Q8NI27 1593 aaKnown RBP30.27■■■□□ 2.44
GPATCH3-201ENST00000361720 RUSC2Q8N2Y8 1516 aa30.25■■■□□ 2.43
GPATCH3-201ENST00000361720 POLA1P09884 1462 aaPredicted RBP30.24■■■□□ 2.43
GPATCH3-201ENST00000361720 WDR62O43379 1518 aa30.21■■■□□ 2.43
GPATCH3-201ENST00000361720 RAD54L2Q9Y4B4 1467 aa30.19■■■□□ 2.42
GPATCH3-201ENST00000361720 CUX2O14529 1486 aa30.06■■■□□ 2.4
GPATCH3-201ENST00000361720 WDR97A6NE52 1622 aa30.02■■■□□ 2.4
GPATCH3-201ENST00000361720 TARBP1Q13395 1621 aaKnown RBP30.01■■■□□ 2.39
GPATCH3-201ENST00000361720 ABCA10Q8WWZ4 1543 aa30■■■□□ 2.39
GPATCH3-201ENST00000361720 LOC105371045A0A1W2PR82 267 aa29.99■■■□□ 2.39
GPATCH3-201ENST00000361720 EHMT2Q96KQ7 1210 aa29.99■■■□□ 2.39
GPATCH3-201ENST00000361720 KIF27Q86VH2 1401 aa29.95■■■□□ 2.39
GPATCH3-201ENST00000361720 EEA1Q15075 1411 aa29.95■■■□□ 2.38
GPATCH3-201ENST00000361720 HRCP23327 699 aa29.94■■■□□ 2.38
GPATCH3-201ENST00000361720 CSRNP3Q8WYN3 585 aa29.92■■■□□ 2.38
GPATCH3-201ENST00000361720 TDRD9Q8NDG6 1382 aaKnown RBP29.91■■■□□ 2.38
GPATCH3-201ENST00000361720 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
GPATCH3-201ENST00000361720 ZNF608Q9ULD9 1512 aaPredicted RBP29.86■■■□□ 2.37
GPATCH3-201ENST00000361720 ABCA5Q8WWZ7 1642 aa29.84■■■□□ 2.37
GPATCH3-201ENST00000361720 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.36
GPATCH3-201ENST00000361720 IGF1RP08069 1367 aa29.78■■■□□ 2.36
GPATCH3-201ENST00000361720 GAPVD1Q14C86 1478 aa29.77■■■□□ 2.36
GPATCH3-201ENST00000361720 PCGF6Q9BYE7 350 aa29.74■■■□□ 2.35
GPATCH3-201ENST00000361720 EIF4G3O43432 1585 aaKnown RBP29.72■■■□□ 2.35
GPATCH3-201ENST00000361720 PBRM1Q86U86 1689 aa29.7■■■□□ 2.34
GPATCH3-201ENST00000361720 KIF21BO75037 1637 aa29.69■■■□□ 2.34
GPATCH3-201ENST00000361720 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
GPATCH3-201ENST00000361720 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
GPATCH3-201ENST00000361720 ERICH3Q5RHP9 1530 aa29.62■■■□□ 2.33
GPATCH3-201ENST00000361720 GOLGA3Q08378 1498 aa29.61■■■□□ 2.33
GPATCH3-201ENST00000361720 CARMIL1Q5VZK9 1371 aa29.6■■■□□ 2.33
GPATCH3-201ENST00000361720 GRIN2BQ13224 1484 aa29.57■■■□□ 2.32
GPATCH3-201ENST00000361720 CUL7Q14999 1698 aa29.55■■■□□ 2.32
GPATCH3-201ENST00000361720 UBTFP17480 764 aaKnown RBP29.53■■■□□ 2.32
GPATCH3-201ENST00000361720 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
GPATCH3-201ENST00000361720 ADAMTS12P58397 1594 aa29.48■■■□□ 2.31
GPATCH3-201ENST00000361720 TNIKQ9UKE5 1360 aa29.41■■■□□ 2.3
GPATCH3-201ENST00000361720 FHAD1B1AJZ9 1412 aa29.4■■■□□ 2.3
GPATCH3-201ENST00000361720 TRIM26Q12899 539 aaPredicted RBP29.39■■■□□ 2.3
GPATCH3-201ENST00000361720 MAGI1Q96QZ7 1491 aaPredicted RBP29.36■■■□□ 2.29
GPATCH3-201ENST00000361720 RANGAP1P46060 587 aaPredicted RBP29.32■■■□□ 2.28
GPATCH3-201ENST00000361720 CEP162Q5TB80 1403 aa29.3■■■□□ 2.28
GPATCH3-201ENST00000361720 SYNJ2O15056 1496 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms