RNA–Protein interactions for RNA: ENST00000322269.10

FAM3A-201, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-201ENST00000322269 NISCHQ9Y2I1 1504 aa42.36■■■■■ 4.37
FAM3A-201ENST00000322269 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
FAM3A-201ENST00000322269 ZCCHC6Q5VYS8 1495 aaKnown RBP35.51■■■■□ 3.28
FAM3A-201ENST00000322269 ABCC9O60706 1549 aa35.45■■■■□ 3.27
FAM3A-201ENST00000322269 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
FAM3A-201ENST00000322269 DCAF1Q9Y4B6 1507 aa35.05■■■■□ 3.2
FAM3A-201ENST00000322269 MYO15BQ96JP2 1530 aa34.79■■■■□ 3.16
FAM3A-201ENST00000322269 NACADO15069 1562 aa34.68■■■■□ 3.14
FAM3A-201ENST00000322269 RB1CC1Q8TDY2 1594 aa34.47■■■■□ 3.11
FAM3A-201ENST00000322269 SHROOM4Q9ULL8 1493 aa34.23■■■■□ 3.07
FAM3A-201ENST00000322269 SCRIBQ14160 1630 aa34.06■■■■□ 3.04
FAM3A-201ENST00000322269 UNC13AQ9UPW8 1703 aa33.75■■■□□ 2.99
FAM3A-201ENST00000322269 BICRAQ9NZM4 1560 aa33.41■■■□□ 2.94
FAM3A-201ENST00000322269 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.92
FAM3A-201ENST00000322269 CECR2Q9BXF3 1484 aa32.92■■■□□ 2.86
FAM3A-201ENST00000322269 SUPT5HO00267 1087 aaKnown RBP32.76■■■□□ 2.83
FAM3A-201ENST00000322269 BAZ1AQ9NRL2 1556 aaPredicted RBP32.75■■■□□ 2.83
FAM3A-201ENST00000322269 RSF1Q96T23 1441 aaPredicted RBP32.7■■■□□ 2.83
FAM3A-201ENST00000322269 MROH2BQ7Z745 1585 aa32.69■■■□□ 2.82
FAM3A-201ENST00000322269 SMARCA4P51532 1647 aa32.64■■■□□ 2.82
FAM3A-201ENST00000322269 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.78
FAM3A-201ENST00000322269 WIZO95785 1651 aa32.41■■■□□ 2.78
FAM3A-201ENST00000322269 PEG3Q9GZU2 1588 aa32.28■■■□□ 2.76
FAM3A-201ENST00000322269 ATAD2BQ9ULI0 1458 aa32.2■■■□□ 2.75
FAM3A-201ENST00000322269 SMARCA2P51531 1590 aa32.19■■■□□ 2.74
FAM3A-201ENST00000322269 TOP2AP11388 1531 aaKnown RBP32.08■■■□□ 2.73
FAM3A-201ENST00000322269 CC2D2AQ9P2K1 1620 aa32.06■■■□□ 2.72
FAM3A-201ENST00000322269 NCAPD3P42695 1498 aa32■■■□□ 2.71
FAM3A-201ENST00000322269 BAZ1BQ9UIG0 1483 aaKnown RBP32■■■□□ 2.71
FAM3A-201ENST00000322269 DNAJC5BQ9UF47 199 aa32■■■□□ 2.71
FAM3A-201ENST00000322269 HMGXB3Q12766 1538 aa31.93■■■□□ 2.7
FAM3A-201ENST00000322269 CCDC88BA6NC98 1476 aa31.74■■■□□ 2.67
FAM3A-201ENST00000322269 CHIC1Q5VXU3 224 aa31.47■■■□□ 2.63
FAM3A-201ENST00000322269 CFTRP13569 1480 aa31.18■■■□□ 2.58
FAM3A-201ENST00000322269 CADPSQ9ULU8 1353 aa31.15■■■□□ 2.58
FAM3A-201ENST00000322269 PRDM2Q13029 1718 aa31.02■■■□□ 2.56
FAM3A-201ENST00000322269 LAMC3Q9Y6N6 1575 aa30.99■■■□□ 2.55
FAM3A-201ENST00000322269 NESP48681 1621 aa30.97■■■□□ 2.55
FAM3A-201ENST00000322269 ABCC8Q09428 1581 aa30.93■■■□□ 2.54
FAM3A-201ENST00000322269 TRIM41Q8WV44 630 aa30.87■■■□□ 2.53
FAM3A-201ENST00000322269 WRNQ14191 1432 aaPredicted RBP eCLIP30.8■■■□□ 2.52
FAM3A-201ENST00000322269 FANCD2Q9BXW9 1451 aa30.79■■■□□ 2.52
FAM3A-201ENST00000322269 PDS5BQ9NTI5 1447 aa30.75■■■□□ 2.51
FAM3A-201ENST00000322269 SYNJ1O43426 1573 aa30.68■■■□□ 2.5
FAM3A-201ENST00000322269 CEP164Q9UPV0 1460 aa30.65■■■□□ 2.5
FAM3A-201ENST00000322269 KIF21AQ7Z4S6 1674 aa30.62■■■□□ 2.49
FAM3A-201ENST00000322269 TOP2BQ02880 1626 aa30.61■■■□□ 2.49
FAM3A-201ENST00000322269 CUX1P39880 1505 aa30.6■■■□□ 2.49
FAM3A-201ENST00000322269 BIVM-ERCC5R4GMW8 1640 aa30.59■■■□□ 2.49
FAM3A-201ENST00000322269 ERCC6Q03468 1493 aa30.5■■■□□ 2.47
FAM3A-201ENST00000322269 DNMBPQ6XZF7 1577 aa30.46■■■□□ 2.47
FAM3A-201ENST00000322269 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
FAM3A-201ENST00000322269 TOPBP1Q92547 1522 aa30.42■■■□□ 2.46
FAM3A-201ENST00000322269 MRC2Q9UBG0 1479 aa30.36■■■□□ 2.45
FAM3A-201ENST00000322269 FGD5Q6ZNL6 1462 aa30.33■■■□□ 2.45
FAM3A-201ENST00000322269 SOGA1O94964 1423 aa30.27■■■□□ 2.44
FAM3A-201ENST00000322269 LOC105371045A0A1W2PR82 267 aa30.26■■■□□ 2.43
FAM3A-201ENST00000322269 FAM9AQ8IZU1 332 aaPredicted RBP30.24■■■□□ 2.43
FAM3A-201ENST00000322269 POLA1P09884 1462 aaPredicted RBP30.24■■■□□ 2.43
FAM3A-201ENST00000322269 WDR62O43379 1518 aa30.23■■■□□ 2.43
FAM3A-201ENST00000322269 THOC2Q8NI27 1593 aaKnown RBP30.21■■■□□ 2.43
FAM3A-201ENST00000322269 EEA1Q15075 1411 aa30.18■■■□□ 2.42
FAM3A-201ENST00000322269 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
FAM3A-201ENST00000322269 RAD54L2Q9Y4B4 1467 aa30.12■■■□□ 2.41
FAM3A-201ENST00000322269 KIF27Q86VH2 1401 aa30.07■■■□□ 2.4
FAM3A-201ENST00000322269 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
FAM3A-201ENST00000322269 CUX2O14529 1486 aa30.06■■■□□ 2.4
FAM3A-201ENST00000322269 CSRNP3Q8WYN3 585 aa30.03■■■□□ 2.4
FAM3A-201ENST00000322269 WDR97A6NE52 1622 aa30.01■■■□□ 2.39
FAM3A-201ENST00000322269 TARBP1Q13395 1621 aaKnown RBP30.01■■■□□ 2.39
FAM3A-201ENST00000322269 IFT140Q96RY7 1462 aa29.94■■■□□ 2.38
FAM3A-201ENST00000322269 TDRD9Q8NDG6 1382 aaKnown RBP29.86■■■□□ 2.37
FAM3A-201ENST00000322269 ABCA5Q8WWZ7 1642 aa29.85■■■□□ 2.37
FAM3A-201ENST00000322269 IGF1RP08069 1367 aa29.83■■■□□ 2.37
FAM3A-201ENST00000322269 EHMT2Q96KQ7 1210 aa29.81■■■□□ 2.36
FAM3A-201ENST00000322269 GAPVD1Q14C86 1478 aa29.81■■■□□ 2.36
FAM3A-201ENST00000322269 PCGF6Q9BYE7 350 aa29.8■■■□□ 2.36
FAM3A-201ENST00000322269 KIF21BO75037 1637 aa29.8■■■□□ 2.36
FAM3A-201ENST00000322269 PRXQ9BXM0 1461 aa29.76■■■□□ 2.35
FAM3A-201ENST00000322269 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
FAM3A-201ENST00000322269 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.354e-7■■■□□ 18.5
FAM3A-201ENST00000322269 HRCP23327 699 aa29.73■■■□□ 2.35
FAM3A-201ENST00000322269 GOLGA3Q08378 1498 aa29.72■■■□□ 2.35
FAM3A-201ENST00000322269 ERICH3Q5RHP9 1530 aa29.72■■■□□ 2.35
FAM3A-201ENST00000322269 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
FAM3A-201ENST00000322269 CARMIL1Q5VZK9 1371 aa29.68■■■□□ 2.34
FAM3A-201ENST00000322269 EIF4G3O43432 1585 aaKnown RBP29.67■■■□□ 2.34
FAM3A-201ENST00000322269 PBRM1Q86U86 1689 aa29.67■■■□□ 2.34
FAM3A-201ENST00000322269 CUL7Q14999 1698 aa29.66■■■□□ 2.34
FAM3A-201ENST00000322269 GRIN2BQ13224 1484 aa29.63■■■□□ 2.33
FAM3A-201ENST00000322269 UBTFP17480 764 aaKnown RBP29.61■■■□□ 2.33
FAM3A-201ENST00000322269 TNIKQ9UKE5 1360 aa29.57■■■□□ 2.32
FAM3A-201ENST00000322269 TRIM26Q12899 539 aaPredicted RBP29.52■■■□□ 2.32
FAM3A-201ENST00000322269 ADAMTS12P58397 1594 aa29.48■■■□□ 2.31
FAM3A-201ENST00000322269 FHAD1B1AJZ9 1412 aa29.48■■■□□ 2.31
FAM3A-201ENST00000322269 SNAPC4Q5SXM2 1469 aa29.47■■■□□ 2.31
FAM3A-201ENST00000322269 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
FAM3A-201ENST00000322269 CEP162Q5TB80 1403 aa29.36■■■□□ 2.29
FAM3A-201ENST00000322269 SYNJ2O15056 1496 aa29.32■■■□□ 2.28
FAM3A-201ENST00000322269 GRIN2AQ12879 1464 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms