RNA–Protein interactions for RNA: ENST00000291295.13

CALM3-201, Transcript of calmodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALM3, Length 2,289 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-201ENST00000291295 NISCHQ9Y2I1 1504 aa39.76■■■■□ 3.96
CALM3-201ENST00000291295 CCDC180Q9P1Z9 1646 aa34.52■■■■□ 3.12
CALM3-201ENST00000291295 ZCCHC6Q5VYS8 1495 aaKnown RBP33.41■■■□□ 2.94
CALM3-201ENST00000291295 DCAF8L2P0C7V8 631 aa33.02■■■□□ 2.88
CALM3-201ENST00000291295 ABCC9O60706 1549 aa32.77■■■□□ 2.84
CALM3-201ENST00000291295 DCAF1Q9Y4B6 1507 aa32.76■■■□□ 2.84
CALM3-201ENST00000291295 SHROOM4Q9ULL8 1493 aa32.73■■■□□ 2.83
CALM3-201ENST00000291295 MYO15BQ96JP2 1530 aa32.31■■■□□ 2.76
CALM3-201ENST00000291295 NACADO15069 1562 aa32.16■■■□□ 2.74
CALM3-201ENST00000291295 SCRIBQ14160 1630 aa31.95■■■□□ 2.7
CALM3-201ENST00000291295 RB1CC1Q8TDY2 1594 aa31.89■■■□□ 2.69
CALM3-201ENST00000291295 SUPT5HO00267 1087 aaKnown RBP31.52■■■□□ 2.64
CALM3-201ENST00000291295 UNC13AQ9UPW8 1703 aa31.31■■■□□ 2.6
CALM3-201ENST00000291295 PABPN1Q86U42 306 aaKnown RBP eCLIP30.99■■■□□ 2.55
CALM3-201ENST00000291295 CECR2Q9BXF3 1484 aa30.99■■■□□ 2.55
CALM3-201ENST00000291295 BICRAQ9NZM4 1560 aa30.98■■■□□ 2.55
CALM3-201ENST00000291295 RSF1Q96T23 1441 aaPredicted RBP30.93■■■□□ 2.54
CALM3-201ENST00000291295 MROH2BQ7Z745 1585 aa30.79■■■□□ 2.52
CALM3-201ENST00000291295 BAZ1AQ9NRL2 1556 aaPredicted RBP30.67■■■□□ 2.5
CALM3-201ENST00000291295 WIZO95785 1651 aa30.55■■■□□ 2.48
CALM3-201ENST00000291295 SMARCA4P51532 1647 aa30.54■■■□□ 2.48
CALM3-201ENST00000291295 HRCP23327 699 aa30.41■■■□□ 2.46
CALM3-201ENST00000291295 TOP2AP11388 1531 aaKnown RBP30.15■■■□□ 2.42
CALM3-201ENST00000291295 CHIC1Q5VXU3 224 aa30.14■■■□□ 2.42
CALM3-201ENST00000291295 PEG3Q9GZU2 1588 aa30.1■■■□□ 2.41
CALM3-201ENST00000291295 EIF4G1Q04637 1599 aaKnown RBP30.04■■■□□ 2.4
CALM3-201ENST00000291295 ATAD2BQ9ULI0 1458 aa30.04■■■□□ 2.4
CALM3-201ENST00000291295 SMARCA2P51531 1590 aa29.96■■■□□ 2.39
CALM3-201ENST00000291295 CCDC88BA6NC98 1476 aa29.91■■■□□ 2.38
CALM3-201ENST00000291295 BAZ1BQ9UIG0 1483 aaKnown RBP29.88■■■□□ 2.37
CALM3-201ENST00000291295 PCGF6Q9BYE7 350 aa29.76■■■□□ 2.35
CALM3-201ENST00000291295 PPARGC1BQ86YN6 1023 aaKnown RBP29.73■■■□□ 2.35
CALM3-201ENST00000291295 NCAPD3P42695 1498 aa29.71■■■□□ 2.35
CALM3-201ENST00000291295 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
CALM3-201ENST00000291295 CC2D2AQ9P2K1 1620 aa29.59■■■□□ 2.33
CALM3-201ENST00000291295 TRIM41Q8WV44 630 aa29.55■■■□□ 2.32
CALM3-201ENST00000291295 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
CALM3-201ENST00000291295 PELP1Q8IZL8 1130 aaKnown RBP29.15■■■□□ 2.26
CALM3-201ENST00000291295 FAM9AQ8IZU1 332 aaPredicted RBP29.13■■■□□ 2.25
CALM3-201ENST00000291295 CFTRP13569 1480 aa29.11■■■□□ 2.25
CALM3-201ENST00000291295 WRNQ14191 1432 aaPredicted RBP eCLIP29.1■■■□□ 2.255e-9■□□□□ 10.3
CALM3-201ENST00000291295 LOC105371045A0A1W2PR82 267 aa29.09■■■□□ 2.25
CALM3-201ENST00000291295 SYNJ1O43426 1573 aa29■■■□□ 2.23
CALM3-201ENST00000291295 CADPSQ9ULU8 1353 aa29■■■□□ 2.23
CALM3-201ENST00000291295 DNAJC5BQ9UF47 199 aa29■■■□□ 2.23
CALM3-201ENST00000291295 PRDM2Q13029 1718 aa28.89■■■□□ 2.22
CALM3-201ENST00000291295 TRIM26Q12899 539 aaPredicted RBP28.88■■■□□ 2.21
CALM3-201ENST00000291295 SOGA1O94964 1423 aa28.84■■■□□ 2.21
CALM3-201ENST00000291295 EHMT2Q96KQ7 1210 aa28.82■■■□□ 2.2
CALM3-201ENST00000291295 NESP48681 1621 aa28.82■■■□□ 2.2
CALM3-201ENST00000291295 TOP2BQ02880 1626 aa28.81■■■□□ 2.2
CALM3-201ENST00000291295 CUX1P39880 1505 aa28.77■■■□□ 2.2
CALM3-201ENST00000291295 BIVM-ERCC5R4GMW8 1640 aa28.75■■■□□ 2.19
CALM3-201ENST00000291295 RUSC2Q8N2Y8 1516 aa28.75■■■□□ 2.19
CALM3-201ENST00000291295 FANCD2Q9BXW9 1451 aa28.71■■■□□ 2.19
CALM3-201ENST00000291295 SCAF1Q9H7N4 1312 aaKnown RBP28.71■■■□□ 2.19
CALM3-201ENST00000291295 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
CALM3-201ENST00000291295 EEA1Q15075 1411 aa28.63■■■□□ 2.17
CALM3-201ENST00000291295 ZEB1P37275 1124 aaPredicted RBP28.6■■■□□ 2.17
CALM3-201ENST00000291295 CSRNP3Q8WYN3 585 aa28.59■■■□□ 2.17
CALM3-201ENST00000291295 CEP164Q9UPV0 1460 aa28.49■■■□□ 2.15
CALM3-201ENST00000291295 PDS5BQ9NTI5 1447 aa28.48■■■□□ 2.15
CALM3-201ENST00000291295 FGD5Q6ZNL6 1462 aa28.44■■■□□ 2.14
CALM3-201ENST00000291295 DNMBPQ6XZF7 1577 aa28.41■■■□□ 2.14
CALM3-201ENST00000291295 TOPBP1Q92547 1522 aa28.4■■■□□ 2.14
CALM3-201ENST00000291295 KIF21AQ7Z4S6 1674 aa28.4■■■□□ 2.14
CALM3-201ENST00000291295 URB2Q14146 1524 aaKnown RBP28.35■■■□□ 2.13
CALM3-201ENST00000291295 KIF27Q86VH2 1401 aa28.33■■■□□ 2.13
CALM3-201ENST00000291295 GOLGA3Q08378 1498 aa28.33■■■□□ 2.13
CALM3-201ENST00000291295 KIF21BO75037 1637 aa28.3■■■□□ 2.12
CALM3-201ENST00000291295 UBTFP17480 764 aaKnown RBP28.3■■■□□ 2.12
CALM3-201ENST00000291295 CUX2O14529 1486 aa28.29■■■□□ 2.12
CALM3-201ENST00000291295 POLA1P09884 1462 aaPredicted RBP28.28■■■□□ 2.12
CALM3-201ENST00000291295 RAD54L2Q9Y4B4 1467 aa28.25■■■□□ 2.11
CALM3-201ENST00000291295 TNIKQ9UKE5 1360 aa28.24■■■□□ 2.11
CALM3-201ENST00000291295 RAPGEF2Q9Y4G8 1499 aa28.23■■■□□ 2.11
CALM3-201ENST00000291295 PRXQ9BXM0 1461 aa28.17■■■□□ 2.1
CALM3-201ENST00000291295 CEP162Q5TB80 1403 aa28.17■■■□□ 2.1
CALM3-201ENST00000291295 ABCA10Q8WWZ4 1543 aa28.13■■■□□ 2.09
CALM3-201ENST00000291295 MRC2Q9UBG0 1479 aa28.11■■■□□ 2.09
CALM3-201ENST00000291295 IGF1RP08069 1367 aa28.1■■■□□ 2.09
CALM3-201ENST00000291295 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
CALM3-201ENST00000291295 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
CALM3-201ENST00000291295 ACIN1Q9UKV3 1341 aaKnown RBP28.02■■■□□ 2.08
CALM3-201ENST00000291295 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
CALM3-201ENST00000291295 TDRD9Q8NDG6 1382 aaKnown RBP27.98■■■□□ 2.07
CALM3-201ENST00000291295 MYT1Q01538 1121 aa27.97■■■□□ 2.07
CALM3-201ENST00000291295 CARMIL1Q5VZK9 1371 aa27.96■■■□□ 2.07
CALM3-201ENST00000291295 WDR62O43379 1518 aa27.95■■■□□ 2.06
CALM3-201ENST00000291295 TARBP1Q13395 1621 aaKnown RBP27.94■■■□□ 2.06
CALM3-201ENST00000291295 RANGAP1P46060 587 aaPredicted RBP27.94■■■□□ 2.06
CALM3-201ENST00000291295 NEUROD1Q13562 356 aa27.94■■■□□ 2.06
CALM3-201ENST00000291295 CLIP1P30622 1438 aa27.91■■■□□ 2.06
CALM3-201ENST00000291295 ABCA5Q8WWZ7 1642 aa27.9■■■□□ 2.06
CALM3-201ENST00000291295 GAPVD1Q14C86 1478 aa27.87■■■□□ 2.05
CALM3-201ENST00000291295 THOC2Q8NI27 1593 aaKnown RBP27.87■■■□□ 2.05
CALM3-201ENST00000291295 CUL7Q14999 1698 aa27.79■■■□□ 2.04
CALM3-201ENST00000291295 AQRO60306 1485 aaKnown RBP eCLIP27.77■■■□□ 2.041e-10■■□□□ 12.6
CALM3-201ENST00000291295 IFT140Q96RY7 1462 aa27.77■■■□□ 2.04
CALM3-201ENST00000291295 GTF3C3Q9Y5Q9 886 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms