RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 NISCHQ9Y2I1 1504 aa47.03■■■■■ 5.12
SNX11-203ENST00000452859 CCDC180Q9P1Z9 1646 aa41.79■■■■■ 4.28
SNX11-203ENST00000452859 ABCC9O60706 1549 aa40.91■■■■■ 4.14
SNX11-203ENST00000452859 DCAF8L2P0C7V8 631 aa39.42■■■■□ 3.9
SNX11-203ENST00000452859 RB1CC1Q8TDY2 1594 aa39.38■■■■□ 3.89
SNX11-203ENST00000452859 NACADO15069 1562 aa39.34■■■■□ 3.89
SNX11-203ENST00000452859 ZCCHC6Q5VYS8 1495 aaKnown RBP39.15■■■■□ 3.86
SNX11-203ENST00000452859 MYO15BQ96JP2 1530 aa39.1■■■■□ 3.85
SNX11-203ENST00000452859 DCAF1Q9Y4B6 1507 aa38.92■■■■□ 3.82
SNX11-203ENST00000452859 UNC13AQ9UPW8 1703 aa38.36■■■■□ 3.73
SNX11-203ENST00000452859 PABPN1Q86U42 306 aaKnown RBP eCLIP38.26■■■■□ 3.71
SNX11-203ENST00000452859 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
SNX11-203ENST00000452859 BICRAQ9NZM4 1560 aa38.09■■■■□ 3.69
SNX11-203ENST00000452859 SHROOM4Q9ULL8 1493 aa37.8■■■■□ 3.64
SNX11-203ENST00000452859 DNAJC5BQ9UF47 199 aa37.51■■■■□ 3.6
SNX11-203ENST00000452859 EIF4G1Q04637 1599 aaKnown RBP37.14■■■■□ 3.54
SNX11-203ENST00000452859 CC2D2AQ9P2K1 1620 aa36.98■■■■□ 3.51
SNX11-203ENST00000452859 CECR2Q9BXF3 1484 aa36.78■■■■□ 3.48
SNX11-203ENST00000452859 BAZ1AQ9NRL2 1556 aaPredicted RBP36.48■■■■□ 3.43
SNX11-203ENST00000452859 SMARCA4P51532 1647 aa36.46■■■■□ 3.43
SNX11-203ENST00000452859 NCAPD3P42695 1498 aa36.3■■■■□ 3.4
SNX11-203ENST00000452859 ATAD2BQ9ULI0 1458 aa36.3■■■■□ 3.4
SNX11-203ENST00000452859 SMARCA2P51531 1590 aa36.29■■■■□ 3.4
SNX11-203ENST00000452859 MROH2BQ7Z745 1585 aa36.21■■■■□ 3.39
SNX11-203ENST00000452859 PEG3Q9GZU2 1588 aa36.11■■■■□ 3.37
SNX11-203ENST00000452859 HMGXB3Q12766 1538 aa36.09■■■■□ 3.37
SNX11-203ENST00000452859 BAZ1BQ9UIG0 1483 aaKnown RBP36.03■■■■□ 3.36
SNX11-203ENST00000452859 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
SNX11-203ENST00000452859 WIZO95785 1651 aa35.81■■■■□ 3.32
SNX11-203ENST00000452859 TOP2AP11388 1531 aaKnown RBP35.47■■■■□ 3.27
SNX11-203ENST00000452859 NESP48681 1621 aa35.36■■■■□ 3.25
SNX11-203ENST00000452859 LAMC3Q9Y6N6 1575 aa35.33■■■■□ 3.25
SNX11-203ENST00000452859 ERCC6Q03468 1493 aa35.33■■■■□ 3.25
SNX11-203ENST00000452859 CADPSQ9ULU8 1353 aa35.26■■■■□ 3.24
SNX11-203ENST00000452859 PDS5BQ9NTI5 1447 aa35.16■■■■□ 3.22
SNX11-203ENST00000452859 CCDC88BA6NC98 1476 aa35.06■■■■□ 3.2
SNX11-203ENST00000452859 CFTRP13569 1480 aa35.02■■■■□ 3.2
SNX11-203ENST00000452859 SUPT5HO00267 1087 aaKnown RBP35.01■■■■□ 3.19
SNX11-203ENST00000452859 CUX2O14529 1486 aa34.92■■■■□ 3.18
SNX11-203ENST00000452859 KIF21AQ7Z4S6 1674 aa34.92■■■■□ 3.18
SNX11-203ENST00000452859 FANCD2Q9BXW9 1451 aa34.83■■■■□ 3.17
SNX11-203ENST00000452859 THOC2Q8NI27 1593 aaKnown RBP34.81■■■■□ 3.16
SNX11-203ENST00000452859 CEP164Q9UPV0 1460 aa34.81■■■■□ 3.16
SNX11-203ENST00000452859 MRC2Q9UBG0 1479 aa34.74■■■■□ 3.15
SNX11-203ENST00000452859 PRDM2Q13029 1718 aa34.69■■■■□ 3.14
SNX11-203ENST00000452859 WDR62O43379 1518 aa34.59■■■■□ 3.13
SNX11-203ENST00000452859 URB2Q14146 1524 aaKnown RBP34.44■■■■□ 3.1
SNX11-203ENST00000452859 ABCC8Q09428 1581 aa34.34■■■■□ 3.09
SNX11-203ENST00000452859 TOPBP1Q92547 1522 aa34.26■■■■□ 3.08
SNX11-203ENST00000452859 DNMBPQ6XZF7 1577 aa34.22■■■■□ 3.07
SNX11-203ENST00000452859 IFT140Q96RY7 1462 aa34.08■■■■□ 3.05
SNX11-203ENST00000452859 CUX1P39880 1505 aa33.97■■■■□ 3.03
SNX11-203ENST00000452859 POLA1P09884 1462 aaPredicted RBP33.97■■■■□ 3.03
SNX11-203ENST00000452859 FGD5Q6ZNL6 1462 aa33.89■■■■□ 3.02
SNX11-203ENST00000452859 SOGA1O94964 1423 aa33.89■■■■□ 3.02
SNX11-203ENST00000452859 DNAJC5Q9H3Z4 198 aa33.86■■■■□ 3.01
SNX11-203ENST00000452859 ZNF608Q9ULD9 1512 aaPredicted RBP33.86■■■■□ 3.01
SNX11-203ENST00000452859 TARBP1Q13395 1621 aaKnown RBP33.84■■■■□ 3.01
SNX11-203ENST00000452859 WRNQ14191 1432 aaPredicted RBP eCLIP33.83■■■■□ 3.01
SNX11-203ENST00000452859 RAD54L2Q9Y4B4 1467 aa33.81■■■■□ 3
SNX11-203ENST00000452859 EIF4G3O43432 1585 aaKnown RBP33.72■■■□□ 2.99
SNX11-203ENST00000452859 AQRO60306 1485 aaKnown RBP eCLIP33.71■■■□□ 2.99
SNX11-203ENST00000452859 TOP2BQ02880 1626 aa33.71■■■□□ 2.99
SNX11-203ENST00000452859 BIVM-ERCC5R4GMW8 1640 aa33.67■■■□□ 2.98
SNX11-203ENST00000452859 TDRD9Q8NDG6 1382 aaKnown RBP33.67■■■□□ 2.98
SNX11-203ENST00000452859 SYNJ1O43426 1573 aa33.66■■■□□ 2.98
SNX11-203ENST00000452859 WDR97A6NE52 1622 aa33.64■■■□□ 2.98
SNX11-203ENST00000452859 ABCA10Q8WWZ4 1543 aa33.57■■■□□ 2.97
SNX11-203ENST00000452859 OSCARQ8IYS5 282 aa33.55■■■□□ 2.96
SNX11-203ENST00000452859 GRIN2BQ13224 1484 aa33.48■■■□□ 2.95
SNX11-203ENST00000452859 GAPVD1Q14C86 1478 aa33.48■■■□□ 2.95
SNX11-203ENST00000452859 FBLN2P98095 1184 aa33.4■■■□□ 2.94
SNX11-203ENST00000452859 SNAPC4Q5SXM2 1469 aa33.4■■■□□ 2.94
SNX11-203ENST00000452859 ABCA5Q8WWZ7 1642 aa33.39■■■□□ 2.93
SNX11-203ENST00000452859 MAGI1Q96QZ7 1491 aaPredicted RBP33.38■■■□□ 2.93
SNX11-203ENST00000452859 PBRM1Q86U86 1689 aa33.33■■■□□ 2.93
SNX11-203ENST00000452859 CHMP7Q8WUX9 453 aaPredicted RBP33.31■■■□□ 2.92
SNX11-203ENST00000452859 CHD1O14646 1710 aa33.28■■■□□ 2.92
SNX11-203ENST00000452859 SYNJ2O15056 1496 aa33.25■■■□□ 2.91
SNX11-203ENST00000452859 ERICH3Q5RHP9 1530 aa33.18■■■□□ 2.9
SNX11-203ENST00000452859 KIF27Q86VH2 1401 aa33.16■■■□□ 2.9
SNX11-203ENST00000452859 TRIM41Q8WV44 630 aa33.11■■■□□ 2.89
SNX11-203ENST00000452859 FHAD1B1AJZ9 1412 aa33.1■■■□□ 2.89
SNX11-203ENST00000452859 ADAMTS12P58397 1594 aa33.08■■■□□ 2.89
SNX11-203ENST00000452859 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
SNX11-203ENST00000452859 IGF1RP08069 1367 aa32.98■■■□□ 2.87
SNX11-203ENST00000452859 CLASP1Q7Z460 1538 aa32.94■■■□□ 2.86
SNX11-203ENST00000452859 ARHGEF11O15085 1522 aa32.9■■■□□ 2.86
SNX11-203ENST00000452859 RIMBP3CA6NJZ7 1639 aa32.87■■■□□ 2.85
SNX11-203ENST00000452859 RIMBP3BA6NNM3 1639 aa32.87■■■□□ 2.85
SNX11-203ENST00000452859 RIMBP3Q9UFD9 1639 aa32.87■■■□□ 2.85
SNX11-203ENST00000452859 CUL7Q14999 1698 aa32.87■■■□□ 2.85
SNX11-203ENST00000452859 NUP160Q12769 1436 aa32.86■■■□□ 2.85
SNX11-203ENST00000452859 CARMIL1Q5VZK9 1371 aa32.81■■■□□ 2.84
SNX11-203ENST00000452859 CEP170Q5SW79 1584 aa32.81■■■□□ 2.84
SNX11-203ENST00000452859 RUSC2Q8N2Y8 1516 aa32.75■■■□□ 2.83
SNX11-203ENST00000452859 CYB5RLQ6IPT4 315 aa32.68■■■□□ 2.82
SNX11-203ENST00000452859 CHIC1Q5VXU3 224 aa32.64■■■□□ 2.82
SNX11-203ENST00000452859 ARAP1Q96P48 1450 aa32.62■■■□□ 2.81
SNX11-203ENST00000452859 RAPGEF2Q9Y4G8 1499 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms