RNA–Protein interactions for RNA: ENST00000315467.8

GCSH-201, Transcript of glycine cleavage system protein H, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCSH, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-201ENST00000315467 NISCHQ9Y2I1 1504 aa47.13■■■■■ 5.14
GCSH-201ENST00000315467 CCDC180Q9P1Z9 1646 aa41.81■■■■■ 4.28
GCSH-201ENST00000315467 ABCC9O60706 1549 aa40.71■■■■■ 4.11
GCSH-201ENST00000315467 DCAF8L2P0C7V8 631 aa39.33■■■■□ 3.89
GCSH-201ENST00000315467 ZCCHC6Q5VYS8 1495 aaKnown RBP39.3■■■■□ 3.88
GCSH-201ENST00000315467 NACADO15069 1562 aa39.27■■■■□ 3.88
GCSH-201ENST00000315467 RB1CC1Q8TDY2 1594 aa39.27■■■■□ 3.88
GCSH-201ENST00000315467 MYO15BQ96JP2 1530 aa39.11■■■■□ 3.85
GCSH-201ENST00000315467 DCAF1Q9Y4B6 1507 aa39.01■■■■□ 3.84
GCSH-201ENST00000315467 UNC13AQ9UPW8 1703 aa38.35■■■■□ 3.73
GCSH-201ENST00000315467 SCRIBQ14160 1630 aa38.15■■■■□ 3.7
GCSH-201ENST00000315467 PABPN1Q86U42 306 aaKnown RBP eCLIP38.09■■■■□ 3.69
GCSH-201ENST00000315467 BICRAQ9NZM4 1560 aa38.04■■■■□ 3.68
GCSH-201ENST00000315467 SHROOM4Q9ULL8 1493 aa37.7■■■■□ 3.63
GCSH-201ENST00000315467 DNAJC5BQ9UF47 199 aa37.18■■■■□ 3.54
GCSH-201ENST00000315467 EIF4G1Q04637 1599 aaKnown RBP37.04■■■■□ 3.52
GCSH-201ENST00000315467 CC2D2AQ9P2K1 1620 aa36.84■■■■□ 3.49
GCSH-201ENST00000315467 CECR2Q9BXF3 1484 aa36.68■■■■□ 3.46
GCSH-201ENST00000315467 BAZ1AQ9NRL2 1556 aaPredicted RBP36.53■■■■□ 3.44
GCSH-201ENST00000315467 SMARCA4P51532 1647 aa36.52■■■■□ 3.44
GCSH-201ENST00000315467 MROH2BQ7Z745 1585 aa36.31■■■■□ 3.4
GCSH-201ENST00000315467 ATAD2BQ9ULI0 1458 aa36.28■■■■□ 3.4
GCSH-201ENST00000315467 SMARCA2P51531 1590 aa36.26■■■■□ 3.4
GCSH-201ENST00000315467 NCAPD3P42695 1498 aa36.24■■■■□ 3.39
GCSH-201ENST00000315467 PEG3Q9GZU2 1588 aa36.17■■■■□ 3.38
GCSH-201ENST00000315467 HMGXB3Q12766 1538 aa36.07■■■■□ 3.37
GCSH-201ENST00000315467 BAZ1BQ9UIG0 1483 aaKnown RBP36■■■■□ 3.35
GCSH-201ENST00000315467 RSF1Q96T23 1441 aaPredicted RBP35.98■■■■□ 3.35
GCSH-201ENST00000315467 WIZO95785 1651 aa35.93■■■■□ 3.34
GCSH-201ENST00000315467 TOP2AP11388 1531 aaKnown RBP35.57■■■■□ 3.29
GCSH-201ENST00000315467 NESP48681 1621 aa35.28■■■■□ 3.24
GCSH-201ENST00000315467 LAMC3Q9Y6N6 1575 aa35.25■■■■□ 3.23
GCSH-201ENST00000315467 SUPT5HO00267 1087 aaKnown RBP35.25■■■■□ 3.23
GCSH-201ENST00000315467 CADPSQ9ULU8 1353 aa35.2■■■■□ 3.23
GCSH-201ENST00000315467 CCDC88BA6NC98 1476 aa35.16■■■■□ 3.22
GCSH-201ENST00000315467 ERCC6Q03468 1493 aa35.1■■■■□ 3.21
GCSH-201ENST00000315467 CFTRP13569 1480 aa35.03■■■■□ 3.2
GCSH-201ENST00000315467 PDS5BQ9NTI5 1447 aa35.02■■■■□ 3.2
GCSH-201ENST00000315467 KIF21AQ7Z4S6 1674 aa34.87■■■■□ 3.17
GCSH-201ENST00000315467 FANCD2Q9BXW9 1451 aa34.79■■■■□ 3.16
GCSH-201ENST00000315467 PRDM2Q13029 1718 aa34.76■■■■□ 3.16
GCSH-201ENST00000315467 CEP164Q9UPV0 1460 aa34.73■■■■□ 3.15
GCSH-201ENST00000315467 THOC2Q8NI27 1593 aaKnown RBP34.7■■■■□ 3.15
GCSH-201ENST00000315467 CUX2O14529 1486 aa34.65■■■■□ 3.14
GCSH-201ENST00000315467 MRC2Q9UBG0 1479 aa34.63■■■■□ 3.13
GCSH-201ENST00000315467 WDR62O43379 1518 aa34.5■■■■□ 3.11
GCSH-201ENST00000315467 URB2Q14146 1524 aaKnown RBP34.41■■■■□ 3.1
GCSH-201ENST00000315467 ABCC8Q09428 1581 aa34.29■■■■□ 3.08
GCSH-201ENST00000315467 TOPBP1Q92547 1522 aa34.25■■■■□ 3.07
GCSH-201ENST00000315467 DNMBPQ6XZF7 1577 aa34.23■■■■□ 3.07
GCSH-201ENST00000315467 CUX1P39880 1505 aa34.06■■■■□ 3.04
GCSH-201ENST00000315467 IFT140Q96RY7 1462 aa33.99■■■■□ 3.03
GCSH-201ENST00000315467 POLA1P09884 1462 aaPredicted RBP33.97■■■■□ 3.03
GCSH-201ENST00000315467 WRNQ14191 1432 aaPredicted RBP eCLIP33.93■■■■□ 3.02
GCSH-201ENST00000315467 FGD5Q6ZNL6 1462 aa33.92■■■■□ 3.02
GCSH-201ENST00000315467 SOGA1O94964 1423 aa33.85■■■■□ 3.01
GCSH-201ENST00000315467 TARBP1Q13395 1621 aaKnown RBP33.85■■■■□ 3.01
GCSH-201ENST00000315467 TOP2BQ02880 1626 aa33.83■■■■□ 3.01
GCSH-201ENST00000315467 RAD54L2Q9Y4B4 1467 aa33.82■■■■□ 3
GCSH-201ENST00000315467 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3
GCSH-201ENST00000315467 SYNJ1O43426 1573 aa33.82■■■■□ 3
GCSH-201ENST00000315467 ZNF608Q9ULD9 1512 aaPredicted RBP33.8■■■■□ 3
GCSH-201ENST00000315467 EIF4G3O43432 1585 aaKnown RBP33.68■■■□□ 2.98
GCSH-201ENST00000315467 AQRO60306 1485 aaKnown RBP eCLIP33.65■■■□□ 2.989e-9■■■■■ 35.9
GCSH-201ENST00000315467 TDRD9Q8NDG6 1382 aaKnown RBP33.63■■■□□ 2.97
GCSH-201ENST00000315467 WDR97A6NE52 1622 aa33.62■■■□□ 2.97
GCSH-201ENST00000315467 ABCA10Q8WWZ4 1543 aa33.61■■■□□ 2.97
GCSH-201ENST00000315467 GAPVD1Q14C86 1478 aa33.46■■■□□ 2.95
GCSH-201ENST00000315467 ABCA5Q8WWZ7 1642 aa33.44■■■□□ 2.94
GCSH-201ENST00000315467 GRIN2BQ13224 1484 aa33.43■■■□□ 2.94
GCSH-201ENST00000315467 DNAJC5Q9H3Z4 198 aa33.36■■■□□ 2.93
GCSH-201ENST00000315467 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
GCSH-201ENST00000315467 SNAPC4Q5SXM2 1469 aa33.34■■■□□ 2.93
GCSH-201ENST00000315467 MAGI1Q96QZ7 1491 aaPredicted RBP33.32■■■□□ 2.92
GCSH-201ENST00000315467 TRIM41Q8WV44 630 aa33.3■■■□□ 2.92
GCSH-201ENST00000315467 OSCARQ8IYS5 282 aa33.28■■■□□ 2.92
GCSH-201ENST00000315467 FBLN2P98095 1184 aa33.24■■■□□ 2.91
GCSH-201ENST00000315467 KIF27Q86VH2 1401 aa33.22■■■□□ 2.91
GCSH-201ENST00000315467 ERICH3Q5RHP9 1530 aa33.22■■■□□ 2.91
GCSH-201ENST00000315467 CHD1O14646 1710 aa33.21■■■□□ 2.91
GCSH-201ENST00000315467 SYNJ2O15056 1496 aa33.19■■■□□ 2.9
GCSH-201ENST00000315467 CHMP7Q8WUX9 453 aaPredicted RBP33.18■■■□□ 2.9
GCSH-201ENST00000315467 ADAMTS12P58397 1594 aa33.11■■■□□ 2.89
GCSH-201ENST00000315467 FHAD1B1AJZ9 1412 aa33.09■■■□□ 2.89
GCSH-201ENST00000315467 IGF1RP08069 1367 aa33.06■■■□□ 2.88
GCSH-201ENST00000315467 CHIC1Q5VXU3 224 aa33■■■□□ 2.87
GCSH-201ENST00000315467 GRIN2AQ12879 1464 aa32.99■■■□□ 2.87
GCSH-201ENST00000315467 CUL7Q14999 1698 aa32.95■■■□□ 2.87
GCSH-201ENST00000315467 RUSC2Q8N2Y8 1516 aa32.95■■■□□ 2.86
GCSH-201ENST00000315467 CARMIL1Q5VZK9 1371 aa32.87■■■□□ 2.85
GCSH-201ENST00000315467 CLASP1Q7Z460 1538 aa32.86■■■□□ 2.85
GCSH-201ENST00000315467 NUP160Q12769 1436 aa32.83■■■□□ 2.85
GCSH-201ENST00000315467 CEP170Q5SW79 1584 aa32.81■■■□□ 2.84
GCSH-201ENST00000315467 EEA1Q15075 1411 aa32.72■■■□□ 2.83
GCSH-201ENST00000315467 ARHGEF11O15085 1522 aa32.7■■■□□ 2.83
GCSH-201ENST00000315467 RAPGEF2Q9Y4G8 1499 aa32.69■■■□□ 2.82
GCSH-201ENST00000315467 RIMBP3CA6NJZ7 1639 aa32.68■■■□□ 2.82
GCSH-201ENST00000315467 RIMBP3BA6NNM3 1639 aa32.68■■■□□ 2.82
GCSH-201ENST00000315467 RIMBP3Q9UFD9 1639 aa32.68■■■□□ 2.82
GCSH-201ENST00000315467 CSRNP3Q8WYN3 585 aa32.66■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms