RNA–Protein interactions for RNA: ENST00000369660.8

UBL4A-202, Transcript of ubiquitin like 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL4A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-202ENST00000369660 NISCHQ9Y2I1 1504 aa43.05■■■■■ 4.48
UBL4A-202ENST00000369660 CCDC180Q9P1Z9 1646 aa37.3■■■■□ 3.56
UBL4A-202ENST00000369660 ZCCHC6Q5VYS8 1495 aaKnown RBP36.14■■■■□ 3.38
UBL4A-202ENST00000369660 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
UBL4A-202ENST00000369660 ABCC9O60706 1549 aa35.74■■■■□ 3.31
UBL4A-202ENST00000369660 SHROOM4Q9ULL8 1493 aa35.69■■■■□ 3.3
UBL4A-202ENST00000369660 DCAF1Q9Y4B6 1507 aa35.33■■■■□ 3.25
UBL4A-202ENST00000369660 MYO15BQ96JP2 1530 aa34.83■■■■□ 3.17
UBL4A-202ENST00000369660 NACADO15069 1562 aa34.8■■■■□ 3.16
UBL4A-202ENST00000369660 SCRIBQ14160 1630 aa34.72■■■■□ 3.15
UBL4A-202ENST00000369660 RB1CC1Q8TDY2 1594 aa34.56■■■■□ 3.12
UBL4A-202ENST00000369660 SUPT5HO00267 1087 aaKnown RBP34.33■■■■□ 3.09
UBL4A-202ENST00000369660 UNC13AQ9UPW8 1703 aa34■■■■□ 3.03
UBL4A-202ENST00000369660 PABPN1Q86U42 306 aaKnown RBP eCLIP33.86■■■■□ 3.01
UBL4A-202ENST00000369660 CECR2Q9BXF3 1484 aa33.67■■■□□ 2.98
UBL4A-202ENST00000369660 BICRAQ9NZM4 1560 aa33.62■■■□□ 2.97
UBL4A-202ENST00000369660 RSF1Q96T23 1441 aaPredicted RBP33.51■■■□□ 2.96
UBL4A-202ENST00000369660 MROH2BQ7Z745 1585 aa33.4■■■□□ 2.94
UBL4A-202ENST00000369660 BAZ1AQ9NRL2 1556 aaPredicted RBP33.19■■■□□ 2.9
UBL4A-202ENST00000369660 WIZO95785 1651 aa33.17■■■□□ 2.9
UBL4A-202ENST00000369660 SMARCA4P51532 1647 aa33.09■■■□□ 2.89
UBL4A-202ENST00000369660 CHIC1Q5VXU3 224 aa32.66■■■□□ 2.82
UBL4A-202ENST00000369660 EIF4G1Q04637 1599 aaKnown RBP32.62■■■□□ 2.81
UBL4A-202ENST00000369660 TOP2AP11388 1531 aaKnown RBP32.62■■■□□ 2.81
UBL4A-202ENST00000369660 ATAD2BQ9ULI0 1458 aa32.58■■■□□ 2.81
UBL4A-202ENST00000369660 PEG3Q9GZU2 1588 aa32.52■■■□□ 2.8
UBL4A-202ENST00000369660 CCDC88BA6NC98 1476 aa32.44■■■□□ 2.78
UBL4A-202ENST00000369660 SMARCA2P51531 1590 aa32.43■■■□□ 2.78
UBL4A-202ENST00000369660 BAZ1BQ9UIG0 1483 aaKnown RBP32.43■■■□□ 2.78
UBL4A-202ENST00000369660 NCAPD3P42695 1498 aa32.18■■■□□ 2.74
UBL4A-202ENST00000369660 CC2D2AQ9P2K1 1620 aa32.18■■■□□ 2.74
UBL4A-202ENST00000369660 TRIM41Q8WV44 630 aa32.08■■■□□ 2.73
UBL4A-202ENST00000369660 HMGXB3Q12766 1538 aa32.08■■■□□ 2.73
UBL4A-202ENST00000369660 ABCC8Q09428 1581 aa31.92■■■□□ 2.7
UBL4A-202ENST00000369660 FAM9AQ8IZU1 332 aaPredicted RBP31.78■■■□□ 2.68
UBL4A-202ENST00000369660 DNAJC5BQ9UF47 199 aa31.75■■■□□ 2.67
UBL4A-202ENST00000369660 LOC105371045A0A1W2PR82 267 aa31.66■■■□□ 2.66
UBL4A-202ENST00000369660 EHMT2Q96KQ7 1210 aa31.57■■■□□ 2.64
UBL4A-202ENST00000369660 WRNQ14191 1432 aaPredicted RBP eCLIP31.54■■■□□ 2.64
UBL4A-202ENST00000369660 CFTRP13569 1480 aa31.54■■■□□ 2.64
UBL4A-202ENST00000369660 CADPSQ9ULU8 1353 aa31.47■■■□□ 2.63
UBL4A-202ENST00000369660 SYNJ1O43426 1573 aa31.45■■■□□ 2.62
UBL4A-202ENST00000369660 NESP48681 1621 aa31.4■■■□□ 2.62
UBL4A-202ENST00000369660 SOGA1O94964 1423 aa31.32■■■□□ 2.6
UBL4A-202ENST00000369660 RUSC2Q8N2Y8 1516 aa31.24■■■□□ 2.59
UBL4A-202ENST00000369660 PRDM2Q13029 1718 aa31.24■■■□□ 2.59
UBL4A-202ENST00000369660 CUX1P39880 1505 aa31.19■■■□□ 2.58
UBL4A-202ENST00000369660 TOP2BQ02880 1626 aa31.17■■■□□ 2.58
UBL4A-202ENST00000369660 FANCD2Q9BXW9 1451 aa31.17■■■□□ 2.58
UBL4A-202ENST00000369660 BIVM-ERCC5R4GMW8 1640 aa31.09■■■□□ 2.57
UBL4A-202ENST00000369660 LAMC3Q9Y6N6 1575 aa31.06■■■□□ 2.56
UBL4A-202ENST00000369660 CSRNP3Q8WYN3 585 aa31■■■□□ 2.55
UBL4A-202ENST00000369660 CEP164Q9UPV0 1460 aa30.92■■■□□ 2.54
UBL4A-202ENST00000369660 PDS5BQ9NTI5 1447 aa30.9■■■□□ 2.54
UBL4A-202ENST00000369660 EEA1Q15075 1411 aa30.89■■■□□ 2.53
UBL4A-202ENST00000369660 KIF21AQ7Z4S6 1674 aa30.88■■■□□ 2.53
UBL4A-202ENST00000369660 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
UBL4A-202ENST00000369660 TOPBP1Q92547 1522 aa30.81■■■□□ 2.52
UBL4A-202ENST00000369660 URB2Q14146 1524 aaKnown RBP30.79■■■□□ 2.52
UBL4A-202ENST00000369660 UBTFP17480 764 aaKnown RBP30.78■■■□□ 2.52
UBL4A-202ENST00000369660 DNMBPQ6XZF7 1577 aa30.78■■■□□ 2.52
UBL4A-202ENST00000369660 RAD54L2Q9Y4B4 1467 aa30.73■■■□□ 2.51
UBL4A-202ENST00000369660 CUX2O14529 1486 aa30.71■■■□□ 2.51
UBL4A-202ENST00000369660 POLA1P09884 1462 aaPredicted RBP30.7■■■□□ 2.5
UBL4A-202ENST00000369660 KIF27Q86VH2 1401 aa30.69■■■□□ 2.5
UBL4A-202ENST00000369660 GOLGA3Q08378 1498 aa30.63■■■□□ 2.49
UBL4A-202ENST00000369660 RAPGEF2Q9Y4G8 1499 aa30.62■■■□□ 2.49
UBL4A-202ENST00000369660 RANGAP1P46060 587 aaPredicted RBP30.58■■■□□ 2.49
UBL4A-202ENST00000369660 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
UBL4A-202ENST00000369660 KIF21BO75037 1637 aa30.55■■■□□ 2.48
UBL4A-202ENST00000369660 TNIKQ9UKE5 1360 aa30.53■■■□□ 2.48
UBL4A-202ENST00000369660 MRC2Q9UBG0 1479 aa30.51■■■□□ 2.47
UBL4A-202ENST00000369660 CEP162Q5TB80 1403 aa30.5■■■□□ 2.47
UBL4A-202ENST00000369660 IGF1RP08069 1367 aa30.48■■■□□ 2.47
UBL4A-202ENST00000369660 TDRD9Q8NDG6 1382 aaKnown RBP30.47■■■□□ 2.47
UBL4A-202ENST00000369660 PRXQ9BXM0 1461 aa30.46■■■□□ 2.47
UBL4A-202ENST00000369660 ABCA10Q8WWZ4 1543 aa30.46■■■□□ 2.47
UBL4A-202ENST00000369660 PPARGC1BQ86YN6 1023 aaKnown RBP30.36■■■□□ 2.45
UBL4A-202ENST00000369660 CARMIL1Q5VZK9 1371 aa30.34■■■□□ 2.45
UBL4A-202ENST00000369660 WDR97A6NE52 1622 aa30.32■■■□□ 2.44
UBL4A-202ENST00000369660 ERICH3Q5RHP9 1530 aa30.31■■■□□ 2.44
UBL4A-202ENST00000369660 WDR62O43379 1518 aa30.3■■■□□ 2.44
UBL4A-202ENST00000369660 TARBP1Q13395 1621 aaKnown RBP30.29■■■□□ 2.44
UBL4A-202ENST00000369660 GAPVD1Q14C86 1478 aa30.25■■■□□ 2.43
UBL4A-202ENST00000369660 THOC2Q8NI27 1593 aaKnown RBP30.24■■■□□ 2.43
UBL4A-202ENST00000369660 AQRO60306 1485 aaKnown RBP eCLIP30.24■■■□□ 2.436e-6■■■■□ 25.1
UBL4A-202ENST00000369660 CLIP1P30622 1438 aa30.24■■■□□ 2.43
UBL4A-202ENST00000369660 PCGF6Q9BYE7 350 aa30.22■■■□□ 2.43
UBL4A-202ENST00000369660 ABCA5Q8WWZ7 1642 aa30.21■■■□□ 2.43
UBL4A-202ENST00000369660 ZNF608Q9ULD9 1512 aaPredicted RBP30.18■■■□□ 2.42
UBL4A-202ENST00000369660 TTBK1Q5TCY1 1321 aaPredicted RBP30.16■■■□□ 2.42
UBL4A-202ENST00000369660 IFT140Q96RY7 1462 aa30.1■■■□□ 2.41
UBL4A-202ENST00000369660 CUL7Q14999 1698 aa30.06■■■□□ 2.4
UBL4A-202ENST00000369660 PBRM1Q86U86 1689 aa30.02■■■□□ 2.4
UBL4A-202ENST00000369660 EIF4G3O43432 1585 aaKnown RBP29.95■■■□□ 2.38
UBL4A-202ENST00000369660 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.38
UBL4A-202ENST00000369660 P3H3Q8IVL6 736 aa29.95■■■□□ 2.38
UBL4A-202ENST00000369660 GRIN2BQ13224 1484 aa29.94■■■□□ 2.38
UBL4A-202ENST00000369660 ARAP1Q96P48 1450 aa29.92■■■□□ 2.38
UBL4A-202ENST00000369660 ARHGAP35Q9NRY4 1499 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms