Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 MATR3-207ENST00000504023 770 ntTSL 47.31□□□□□ -1.246e-8■■□□□ 11.4
SRSF1Q07955 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.336e-8■■□□□ 11.4
SRSF1Q07955 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.11□□□□□ -1.436e-8■■□□□ 11.4
SRSF1Q07955 MATR3-212ENST00000507860 571 ntTSL 45.94□□□□□ -1.466e-8■■□□□ 11.4
SRSF1Q07955 MATR3-218ENST00000511978 573 ntTSL 35.59□□□□□ -1.516e-8■■□□□ 11.4
SRSF1Q07955 MATR3-209ENST00000504311 423 ntTSL 34.67□□□□□ -1.666e-8■■□□□ 11.4
SRSF1Q07955 MATR3-216ENST00000511249 447 ntTSL 44.4□□□□□ -1.716e-8■■□□□ 11.4
SRSF1Q07955 MATR3-214ENST00000509918 377 ntTSL 44.11□□□□□ -1.756e-8■■□□□ 11.4
SRSF1Q07955 KIAA0907-204ENST00000465953 619 ntTSL 38.44□□□□□ -1.063e-6■■□□□ 11.4
SRSF1Q07955 COL9A3-211ENST00000477612 635 ntTSL 320.52■□□□□ 0.882e-11■■□□□ 11.4
SRSF1Q07955 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.034e-7■■□□□ 11.4
SRSF1Q07955 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.458e-8■■□□□ 11.4
SRSF1Q07955 HNRNPU-217ENST00000638952 5678 ntTSL 514.44□□□□□ -0.18e-8■■□□□ 11.4
SRSF1Q07955 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.228e-8■■□□□ 11.4
SRSF1Q07955 HNRNPU-209ENST00000476241 4844 ntTSL 513.17□□□□□ -0.38e-8■■□□□ 11.4
SRSF1Q07955 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.468e-8■■□□□ 11.4
SRSF1Q07955 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.548e-8■■□□□ 11.4
SRSF1Q07955 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.18□□□□□ -0.467e-22■■□□□ 11.4
SRSF1Q07955 YDJC-205ENST00000468686 1423 ntTSL 1 (best)19.5■□□□□ 0.711e-33■■□□□ 11.4
SRSF1Q07955 YDJC-207ENST00000482998 1388 ntTSL 517.92■□□□□ 0.461e-33■■□□□ 11.4
SRSF1Q07955 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.451e-33■■□□□ 11.4
SRSF1Q07955 YDJC-203ENST00000415762 1410 ntTSL 1 (best)17.28■□□□□ 0.361e-33■■□□□ 11.4
SRSF1Q07955 YDJC-206ENST00000473985 1494 ntTSL 516.54■□□□□ 0.241e-33■■□□□ 11.4
SRSF1Q07955 YDJC-204ENST00000464015 1613 ntTSL 1 (best)16.48■□□□□ 0.231e-33■■□□□ 11.4
SRSF1Q07955 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.24■□□□□ 0.031e-33■■□□□ 11.4
SRSF1Q07955 CCDC84-208ENST00000534656 588 ntTSL 213.81□□□□□ -0.21e-6■□□□□ 11.3
SRSF1Q07955 ARPC4-TTLL3-204ENST00000453882 499 ntTSL 47.72□□□□□ -1.173e-10■□□□□ 11.3
SRSF1Q07955 ZNF280A-201ENST00000302097 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.213e-10■□□□□ 11.3
SRSF1Q07955 LDLR-206ENST00000557958 1881 ntTSL 213.9□□□□□ -0.183e-6■□□□□ 11.3
SRSF1Q07955 SLC25A37-207ENST00000520654 3018 ntTSL 1 (best)8.11□□□□□ -1.119e-9■□□□□ 11.3
SRSF1Q07955 SON-215ENST00000475072 658 ntTSL 29.92□□□□□ -0.825e-6■□□□□ 11.3
SRSF1Q07955 SON-220ENST00000492229 306 ntTSL 53.21□□□□□ -1.95e-6■□□□□ 11.3
SRSF1Q07955 SRSF5-216ENST00000556647 644 ntTSL 210.72□□□□□ -0.692e-12■□□□□ 11.3
SRSF1Q07955 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.334e-7■□□□□ 11.3
SRSF1Q07955 ZNF316-202ENST00000427912 520 ntTSL 313.56□□□□□ -0.244e-7■□□□□ 11.3
SRSF1Q07955 TMEM259-210ENST00000592618 1877 ntTSL 519.97■□□□□ 0.796e-8■□□□□ 11.3
SRSF1Q07955 TMEM259-204ENST00000586285 626 ntTSL 310.97□□□□□ -0.656e-8■□□□□ 11.3
SRSF1Q07955 COL27A1-205ENST00000485397 463 ntTSL 518.82■□□□□ 0.61e-7■□□□□ 11.3
SRSF1Q07955 SPATA20-207ENST00000504271 806 ntTSL 216.84■□□□□ 0.299e-7■□□□□ 11.3
SRSF1Q07955 SPATA20-225ENST00000515619 818 ntTSL 514.39□□□□□ -0.119e-7■□□□□ 11.3
SRSF1Q07955 WDR27-207ENST00000476322 779 ntTSL 316.51■□□□□ 0.235e-9■□□□□ 11.3
SRSF1Q07955 CHMP4A-206ENST00000533011 733 ntTSL 510.58□□□□□ -0.725e-9■□□□□ 11.3
SRSF1Q07955 CHMP4A-209ENST00000542700 847 ntTSL 38.98□□□□□ -0.975e-9■□□□□ 11.3
SRSF1Q07955 CHMP4A-202ENST00000524955 268 ntTSL 24.16□□□□□ -1.745e-9■□□□□ 11.3
SRSF1Q07955 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.281e-6■□□□□ 11.3
SRSF1Q07955 MRPL38-202ENST00000410030 535 ntTSL 425.3■■□□□ 1.641e-6■□□□□ 11.3
SRSF1Q07955 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.581e-6■□□□□ 11.3
SRSF1Q07955 DLG5-208ENST00000476354 1198 ntTSL 216.82■□□□□ 0.281e-9■□□□□ 11.3
SRSF1Q07955 CSNK1E-208ENST00000431611 814 ntTSL 514.84□□□□□ -0.031e-6■□□□□ 11.3
SRSF1Q07955 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.261e-6■□□□□ 11.3
SRSF1Q07955 CSNK1E-209ENST00000431632 763 ntTSL 213.13□□□□□ -0.311e-6■□□□□ 11.3
SRSF1Q07955 CSNK1E-212ENST00000494610 539 ntTSL 211.84□□□□□ -0.511e-6■□□□□ 11.3
SRSF1Q07955 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.541e-6■□□□□ 11.3
SRSF1Q07955 CSNK1E-202ENST00000366216 1005 ntTSL 211.41□□□□□ -0.581e-6■□□□□ 11.3
SRSF1Q07955 CSNK1E-213ENST00000495232 669 ntTSL 210.9□□□□□ -0.661e-6■□□□□ 11.3
SRSF1Q07955 DLG5-206ENST00000468332 5505 ntTSL 210.51□□□□□ -0.731e-9■□□□□ 11.3
SRSF1Q07955 DLG5-207ENST00000475613 7246 ntTSL 510.38□□□□□ -0.751e-9■□□□□ 11.3
SRSF1Q07955 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.861e-9■□□□□ 11.3
SRSF1Q07955 DLG5-204ENST00000463362 2927 ntTSL 1 (best)9.39□□□□□ -0.911e-9■□□□□ 11.3
SRSF1Q07955 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC8.7□□□□□ -1.021e-6■□□□□ 11.3
SRSF1Q07955 DLG5-203ENST00000459739 3167 ntTSL 1 (best)8.49□□□□□ -1.051e-9■□□□□ 11.3
SRSF1Q07955 DLG5-202ENST00000424842 4292 ntTSL 1 (best)7.73□□□□□ -1.171e-9■□□□□ 11.3
SRSF1Q07955 WAC-212ENST00000448193 506 ntTSL 225.69■■□□□ 1.74e-6■□□□□ 11.3
SRSF1Q07955 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.3■■□□□ 1.324e-6■□□□□ 11.3
SRSF1Q07955 PABPC4-207ENST00000451091 898 ntTSL 321.01■□□□□ 0.954e-6■□□□□ 11.3
SRSF1Q07955 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.774e-6■□□□□ 11.3
SRSF1Q07955 WAC-211ENST00000442148 759 ntTSL 518.63■□□□□ 0.574e-6■□□□□ 11.3
SRSF1Q07955 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.09■□□□□ 0.494e-6■□□□□ 11.3
SRSF1Q07955 FAM229A-203ENST00000428500 362 ntAPPRIS ALT2 TSL 217.39■□□□□ 0.374e-6■□□□□ 11.3
SRSF1Q07955 KLHL21-205ENST00000496707 824 ntTSL 1 (best)16.28■□□□□ 0.24e-6■□□□□ 11.3
SRSF1Q07955 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.184e-6■□□□□ 11.3
SRSF1Q07955 TRIB3-203ENST00000449710 1070 ntTSL 515.93■□□□□ 0.144e-6■□□□□ 11.3
SRSF1Q07955 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.92■□□□□ 0.144e-6■□□□□ 11.3
SRSF1Q07955 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.114e-6■□□□□ 11.3
SRSF1Q07955 HGS-202ENST00000570355 735 ntTSL 515.4■□□□□ 0.069e-8■□□□□ 11.3
SRSF1Q07955 HGS-204ENST00000571237 878 ntTSL 315.28■□□□□ 0.042e-7■□□□□ 11.3
SRSF1Q07955 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15□□□□□ -0.014e-6■□□□□ 11.3
SRSF1Q07955 SH3BGR-206ENST00000440288 585 ntTSL 514.74□□□□□ -0.054e-6■□□□□ 11.3
SRSF1Q07955 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.4□□□□□ -0.14e-6■□□□□ 11.3
SRSF1Q07955 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.33□□□□□ -0.124e-6■□□□□ 11.3
SRSF1Q07955 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.134e-6■□□□□ 11.3
SRSF1Q07955 PPFIA4-212ENST00000600447 385 ntTSL 213.64□□□□□ -0.234e-6■□□□□ 11.3
SRSF1Q07955 PPFIA4-209ENST00000599514 573 ntTSL 413.25□□□□□ -0.294e-6■□□□□ 11.3
SRSF1Q07955 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.21□□□□□ -0.294e-6■□□□□ 11.3
SRSF1Q07955 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.34e-6■□□□□ 11.3
SRSF1Q07955 WAC-220ENST00000532233 543 ntTSL 413.11□□□□□ -0.314e-6■□□□□ 11.3
SRSF1Q07955 WAC-217ENST00000526722 585 ntTSL 413.07□□□□□ -0.324e-6■□□□□ 11.3
SRSF1Q07955 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.324e-6■□□□□ 11.3
SRSF1Q07955 WAC-207ENST00000420266 784 ntTSL 512.93□□□□□ -0.344e-6■□□□□ 11.3
SRSF1Q07955 WAC-218ENST00000528491 507 ntTSL 412.92□□□□□ -0.344e-6■□□□□ 11.3
SRSF1Q07955 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.384e-6■□□□□ 11.3
SRSF1Q07955 HGS-211ENST00000573949 461 ntTSL 512.27□□□□□ -0.452e-7■□□□□ 11.3
SRSF1Q07955 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC12.1□□□□□ -0.474e-6■□□□□ 11.3
SRSF1Q07955 HGS-206ENST00000571647 2401 nt12.04□□□□□ -0.482e-7■□□□□ 11.3
SRSF1Q07955 MTF2-204ENST00000468457 1038 ntTSL 511.6□□□□□ -0.554e-6■□□□□ 11.3
SRSF1Q07955 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.584e-6■□□□□ 11.3
SRSF1Q07955 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.33□□□□□ -0.64e-6■□□□□ 11.3
SRSF1Q07955 SH3BGR-204ENST00000380637 1014 ntTSL 3 BASIC11.08□□□□□ -0.644e-6■□□□□ 11.3
SRSF1Q07955 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.744e-6■□□□□ 11.3
SRSF1Q07955 WAC-204ENST00000375646 2176 ntTSL 5 BASIC10.31□□□□□ -0.764e-6■□□□□ 11.3
Retrieved 100 of 14,836 protein–RNA pairs in 160.8 ms