RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 NISCHQ9Y2I1 1504 aa35■■■■□ 3.19
CCDC84-208ENST00000534656 ABCC9O60706 1549 aa31.56■■■□□ 2.64
CCDC84-208ENST00000534656 CCDC180Q9P1Z9 1646 aa31.43■■■□□ 2.62
CCDC84-208ENST00000534656 RB1CC1Q8TDY2 1594 aa29.99■■■□□ 2.39
CCDC84-208ENST00000534656 NACADO15069 1562 aa29.77■■■□□ 2.36
CCDC84-208ENST00000534656 DNAJC5BQ9UF47 199 aa29.74■■■□□ 2.35
CCDC84-208ENST00000534656 DCAF8L2P0C7V8 631 aa29.6■■■□□ 2.33
CCDC84-208ENST00000534656 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.29
CCDC84-208ENST00000534656 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
CCDC84-208ENST00000534656 UNC13AQ9UPW8 1703 aa29.27■■■□□ 2.28
CCDC84-208ENST00000534656 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
CCDC84-208ENST00000534656 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
CCDC84-208ENST00000534656 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
CCDC84-208ENST00000534656 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
CCDC84-208ENST00000534656 SCRIBQ14160 1630 aa28.63■■■□□ 2.17
CCDC84-208ENST00000534656 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
CCDC84-208ENST00000534656 CECR2Q9BXF3 1484 aa28.45■■■□□ 2.14
CCDC84-208ENST00000534656 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
CCDC84-208ENST00000534656 NCAPD3P42695 1498 aa27.5■■□□□ 1.99
CCDC84-208ENST00000534656 DNAJC5Q9H3Z4 198 aa27.4■■□□□ 1.98
CCDC84-208ENST00000534656 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
CCDC84-208ENST00000534656 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
CCDC84-208ENST00000534656 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
CCDC84-208ENST00000534656 HMGXB3Q12766 1538 aa27.26■■□□□ 1.96
CCDC84-208ENST00000534656 CUX2O14529 1486 aa27.26■■□□□ 1.95
CCDC84-208ENST00000534656 ERCC6Q03468 1493 aa27.25■■□□□ 1.95
CCDC84-208ENST00000534656 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
CCDC84-208ENST00000534656 BAZ1BQ9UIG0 1483 aaKnown RBP27.11■■□□□ 1.93
CCDC84-208ENST00000534656 NESP48681 1621 aa27.08■■□□□ 1.93
CCDC84-208ENST00000534656 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
CCDC84-208ENST00000534656 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
CCDC84-208ENST00000534656 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
CCDC84-208ENST00000534656 THOC2Q8NI27 1593 aaKnown RBP26.82■■□□□ 1.88
CCDC84-208ENST00000534656 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
CCDC84-208ENST00000534656 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.86
CCDC84-208ENST00000534656 CADPSQ9ULU8 1353 aa26.66■■□□□ 1.86
CCDC84-208ENST00000534656 WIZO95785 1651 aa26.61■■□□□ 1.85
CCDC84-208ENST00000534656 MRC2Q9UBG0 1479 aa26.5■■□□□ 1.83
CCDC84-208ENST00000534656 WDR62O43379 1518 aa26.44■■□□□ 1.82
CCDC84-208ENST00000534656 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
CCDC84-208ENST00000534656 CEP164Q9UPV0 1460 aa26.37■■□□□ 1.81
CCDC84-208ENST00000534656 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
CCDC84-208ENST00000534656 CFTRP13569 1480 aa26.32■■□□□ 1.8
CCDC84-208ENST00000534656 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
CCDC84-208ENST00000534656 TRIM41Q8WV44 630 aa26.13■■□□□ 1.77
CCDC84-208ENST00000534656 URB2Q14146 1524 aaKnown RBP26.13■■□□□ 1.77
CCDC84-208ENST00000534656 OSCARQ8IYS5 282 aa26.02■■□□□ 1.76
CCDC84-208ENST00000534656 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
CCDC84-208ENST00000534656 PRDM2Q13029 1718 aa25.99■■□□□ 1.75
CCDC84-208ENST00000534656 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
CCDC84-208ENST00000534656 TOPBP1Q92547 1522 aa25.83■■□□□ 1.72
CCDC84-208ENST00000534656 ZNF608Q9ULD9 1512 aaPredicted RBP25.82■■□□□ 1.72
CCDC84-208ENST00000534656 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
CCDC84-208ENST00000534656 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
CCDC84-208ENST00000534656 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
CCDC84-208ENST00000534656 RIMBP3CA6NJZ7 1639 aa25.65■■□□□ 1.7
CCDC84-208ENST00000534656 RIMBP3BA6NNM3 1639 aa25.65■■□□□ 1.7
CCDC84-208ENST00000534656 RIMBP3Q9UFD9 1639 aa25.65■■□□□ 1.7
CCDC84-208ENST00000534656 TARBP1Q13395 1621 aaKnown RBP25.6■■□□□ 1.69
CCDC84-208ENST00000534656 AQRO60306 1485 aaKnown RBP eCLIP25.59■■□□□ 1.69
CCDC84-208ENST00000534656 ARHGEF11O15085 1522 aa25.57■■□□□ 1.68
CCDC84-208ENST00000534656 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
CCDC84-208ENST00000534656 CHD1O14646 1710 aa25.47■■□□□ 1.67
CCDC84-208ENST00000534656 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
CCDC84-208ENST00000534656 SOGA1O94964 1423 aa25.46■■□□□ 1.67
CCDC84-208ENST00000534656 FBLN2P98095 1184 aa25.45■■□□□ 1.66
CCDC84-208ENST00000534656 TDRD9Q8NDG6 1382 aaKnown RBP25.42■■□□□ 1.66
CCDC84-208ENST00000534656 CYB5RLQ6IPT4 315 aa25.41■■□□□ 1.66
CCDC84-208ENST00000534656 FGD5Q6ZNL6 1462 aa25.37■■□□□ 1.65
CCDC84-208ENST00000534656 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
CCDC84-208ENST00000534656 CUX1P39880 1505 aa25.33■■□□□ 1.65
CCDC84-208ENST00000534656 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
CCDC84-208ENST00000534656 SNAPC4Q5SXM2 1469 aa25.31■■□□□ 1.64
CCDC84-208ENST00000534656 CHMP7Q8WUX9 453 aaPredicted RBP25.25■■□□□ 1.63
CCDC84-208ENST00000534656 MAGI1Q96QZ7 1491 aaPredicted RBP25.25■■□□□ 1.63
CCDC84-208ENST00000534656 GRIN2BQ13224 1484 aa25.24■■□□□ 1.63
CCDC84-208ENST00000534656 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
CCDC84-208ENST00000534656 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
CCDC84-208ENST00000534656 TRHP20396 242 aaPredicted RBP25.17■■□□□ 1.62
CCDC84-208ENST00000534656 SYNJ2O15056 1496 aa25.16■■□□□ 1.62
CCDC84-208ENST00000534656 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
CCDC84-208ENST00000534656 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
CCDC84-208ENST00000534656 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
CCDC84-208ENST00000534656 PBRM1Q86U86 1689 aa25.09■■□□□ 1.61
CCDC84-208ENST00000534656 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
CCDC84-208ENST00000534656 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
CCDC84-208ENST00000534656 GRIN2AQ12879 1464 aa24.9■■□□□ 1.58
CCDC84-208ENST00000534656 TOP2BQ02880 1626 aa24.9■■□□□ 1.58
CCDC84-208ENST00000534656 BIVM-ERCC5R4GMW8 1640 aa24.89■■□□□ 1.57
CCDC84-208ENST00000534656 ADAMTS12P58397 1594 aa24.86■■□□□ 1.57
CCDC84-208ENST00000534656 NUP160Q12769 1436 aa24.84■■□□□ 1.57
CCDC84-208ENST00000534656 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
CCDC84-208ENST00000534656 CEP170Q5SW79 1584 aa24.81■■□□□ 1.56
CCDC84-208ENST00000534656 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
CCDC84-208ENST00000534656 ERICH3Q5RHP9 1530 aa24.77■■□□□ 1.56
CCDC84-208ENST00000534656 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
CCDC84-208ENST00000534656 JPH4Q96JJ6 628 aa24.61■■□□□ 1.53
CCDC84-208ENST00000534656 PRG4Q92954 1404 aaPredicted RBP24.61■■□□□ 1.53
CCDC84-208ENST00000534656 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
CCDC84-208ENST00000534656 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms