RNA–Protein interactions for RNA: ENST00000599514.1

PPFIA4-209, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-209ENST00000599514 NISCHQ9Y2I1 1504 aa32.91■■■□□ 2.86
PPFIA4-209ENST00000599514 ABCC9O60706 1549 aa30.05■■■□□ 2.4
PPFIA4-209ENST00000599514 CCDC180Q9P1Z9 1646 aa29.62■■■□□ 2.33
PPFIA4-209ENST00000599514 DNAJC5BQ9UF47 199 aa28.59■■■□□ 2.17
PPFIA4-209ENST00000599514 RB1CC1Q8TDY2 1594 aa28.41■■■□□ 2.14
PPFIA4-209ENST00000599514 NACADO15069 1562 aa28.15■■■□□ 2.1
PPFIA4-209ENST00000599514 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
PPFIA4-209ENST00000599514 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.06
PPFIA4-209ENST00000599514 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
PPFIA4-209ENST00000599514 UNC13AQ9UPW8 1703 aa27.66■■■□□ 2.02
PPFIA4-209ENST00000599514 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
PPFIA4-209ENST00000599514 SHROOM4Q9ULL8 1493 aa27.23■■□□□ 1.95
PPFIA4-209ENST00000599514 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
PPFIA4-209ENST00000599514 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
PPFIA4-209ENST00000599514 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
PPFIA4-209ENST00000599514 CC2D2AQ9P2K1 1620 aa27.09■■□□□ 1.93
PPFIA4-209ENST00000599514 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
PPFIA4-209ENST00000599514 EIF4G1Q04637 1599 aaKnown RBP26.96■■□□□ 1.91
PPFIA4-209ENST00000599514 DNAJC5Q9H3Z4 198 aa26.53■■□□□ 1.84
PPFIA4-209ENST00000599514 CUX2O14529 1486 aa26.06■■□□□ 1.76
PPFIA4-209ENST00000599514 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
PPFIA4-209ENST00000599514 ERCC6Q03468 1493 aa25.96■■□□□ 1.75
PPFIA4-209ENST00000599514 ATAD2BQ9ULI0 1458 aa25.89■■□□□ 1.73
PPFIA4-209ENST00000599514 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
PPFIA4-209ENST00000599514 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
PPFIA4-209ENST00000599514 NESP48681 1621 aa25.7■■□□□ 1.71
PPFIA4-209ENST00000599514 SMARCA4P51532 1647 aa25.7■■□□□ 1.71
PPFIA4-209ENST00000599514 BAZ1BQ9UIG0 1483 aaKnown RBP25.59■■□□□ 1.69
PPFIA4-209ENST00000599514 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
PPFIA4-209ENST00000599514 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
PPFIA4-209ENST00000599514 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
PPFIA4-209ENST00000599514 LAMC3Q9Y6N6 1575 aa25.45■■□□□ 1.66
PPFIA4-209ENST00000599514 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
PPFIA4-209ENST00000599514 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
PPFIA4-209ENST00000599514 KIF21AQ7Z4S6 1674 aa25.27■■□□□ 1.64
PPFIA4-209ENST00000599514 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
PPFIA4-209ENST00000599514 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
PPFIA4-209ENST00000599514 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.61
PPFIA4-209ENST00000599514 WDR62O43379 1518 aa25.08■■□□□ 1.61
PPFIA4-209ENST00000599514 WIZO95785 1651 aa24.97■■□□□ 1.59
PPFIA4-209ENST00000599514 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
PPFIA4-209ENST00000599514 FANCD2Q9BXW9 1451 aa24.91■■□□□ 1.58
PPFIA4-209ENST00000599514 CFTRP13569 1480 aa24.85■■□□□ 1.57
PPFIA4-209ENST00000599514 OSCARQ8IYS5 282 aa24.85■■□□□ 1.57
PPFIA4-209ENST00000599514 URB2Q14146 1524 aaKnown RBP24.73■■□□□ 1.55
PPFIA4-209ENST00000599514 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
PPFIA4-209ENST00000599514 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
PPFIA4-209ENST00000599514 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
PPFIA4-209ENST00000599514 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
PPFIA4-209ENST00000599514 RIMBP3CA6NJZ7 1639 aa24.48■■□□□ 1.51
PPFIA4-209ENST00000599514 RIMBP3BA6NNM3 1639 aa24.48■■□□□ 1.51
PPFIA4-209ENST00000599514 RIMBP3Q9UFD9 1639 aa24.48■■□□□ 1.51
PPFIA4-209ENST00000599514 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
PPFIA4-209ENST00000599514 PRDM2Q13029 1718 aa24.41■■□□□ 1.5
PPFIA4-209ENST00000599514 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
PPFIA4-209ENST00000599514 TOPBP1Q92547 1522 aa24.39■■□□□ 1.49
PPFIA4-209ENST00000599514 ABCC8Q09428 1581 aa24.32■■□□□ 1.48
PPFIA4-209ENST00000599514 CYB5RLQ6IPT4 315 aa24.28■■□□□ 1.48
PPFIA4-209ENST00000599514 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
PPFIA4-209ENST00000599514 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
PPFIA4-209ENST00000599514 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.47
PPFIA4-209ENST00000599514 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
PPFIA4-209ENST00000599514 FBLN2P98095 1184 aa24.15■■□□□ 1.46
PPFIA4-209ENST00000599514 ARAP1Q96P48 1450 aa24.14■■□□□ 1.46
PPFIA4-209ENST00000599514 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
PPFIA4-209ENST00000599514 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
PPFIA4-209ENST00000599514 CHD1O14646 1710 aa24.12■■□□□ 1.45
PPFIA4-209ENST00000599514 RAD54L2Q9Y4B4 1467 aa24.05■■□□□ 1.44
PPFIA4-209ENST00000599514 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
PPFIA4-209ENST00000599514 SOGA1O94964 1423 aa24.02■■□□□ 1.44
PPFIA4-209ENST00000599514 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
PPFIA4-209ENST00000599514 CHMP7Q8WUX9 453 aaPredicted RBP23.92■■□□□ 1.42
PPFIA4-209ENST00000599514 CLASP1Q7Z460 1538 aa23.92■■□□□ 1.42
PPFIA4-209ENST00000599514 FGD5Q6ZNL6 1462 aa23.91■■□□□ 1.42
PPFIA4-209ENST00000599514 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
PPFIA4-209ENST00000599514 MAGI1Q96QZ7 1491 aaPredicted RBP23.88■■□□□ 1.41
PPFIA4-209ENST00000599514 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
PPFIA4-209ENST00000599514 SYNJ1O43426 1573 aa23.85■■□□□ 1.41
PPFIA4-209ENST00000599514 CUX1P39880 1505 aa23.83■■□□□ 1.41
PPFIA4-209ENST00000599514 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
PPFIA4-209ENST00000599514 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
PPFIA4-209ENST00000599514 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
PPFIA4-209ENST00000599514 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
PPFIA4-209ENST00000599514 PBRM1Q86U86 1689 aa23.62■■□□□ 1.37
PPFIA4-209ENST00000599514 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
PPFIA4-209ENST00000599514 GRIN2AQ12879 1464 aa23.53■■□□□ 1.36
PPFIA4-209ENST00000599514 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
PPFIA4-209ENST00000599514 NUP160Q12769 1436 aa23.49■■□□□ 1.35
PPFIA4-209ENST00000599514 WRNQ14191 1432 aaPredicted RBP eCLIP23.48■■□□□ 1.35
PPFIA4-209ENST00000599514 CEP170Q5SW79 1584 aa23.44■■□□□ 1.34
PPFIA4-209ENST00000599514 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
PPFIA4-209ENST00000599514 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
PPFIA4-209ENST00000599514 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
PPFIA4-209ENST00000599514 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
PPFIA4-209ENST00000599514 TOP2BQ02880 1626 aa23.33■■□□□ 1.32
PPFIA4-209ENST00000599514 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
PPFIA4-209ENST00000599514 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
PPFIA4-209ENST00000599514 PRG4Q92954 1404 aaPredicted RBP23.29■■□□□ 1.32
PPFIA4-209ENST00000599514 JPH4Q96JJ6 628 aa23.28■■□□□ 1.32
PPFIA4-209ENST00000599514 KIF13AQ9H1H9 1805 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms