RNA–Protein interactions for RNA: ENST00000451091.2

PABPC4-207, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-207ENST00000451091 NISCHQ9Y2I1 1504 aa56.06■■■■■ 6.56
PABPC4-207ENST00000451091 CCDC180Q9P1Z9 1646 aa49.74■■■■■ 5.55
PABPC4-207ENST00000451091 ABCC9O60706 1549 aa48.14■■■■■ 5.3
PABPC4-207ENST00000451091 ZCCHC6Q5VYS8 1495 aaKnown RBP46.76■■■■■ 5.08
PABPC4-207ENST00000451091 NACADO15069 1562 aa46.67■■■■■ 5.06
PABPC4-207ENST00000451091 RB1CC1Q8TDY2 1594 aa46.6■■■■■ 5.05
PABPC4-207ENST00000451091 MYO15BQ96JP2 1530 aa46.59■■■■■ 5.05
PABPC4-207ENST00000451091 DCAF8L2P0C7V8 631 aa46.52■■■■■ 5.04
PABPC4-207ENST00000451091 DCAF1Q9Y4B6 1507 aa46.5■■■■■ 5.03
PABPC4-207ENST00000451091 UNC13AQ9UPW8 1703 aa45.52■■■■■ 4.88
PABPC4-207ENST00000451091 SCRIBQ14160 1630 aa45.24■■■■■ 4.83
PABPC4-207ENST00000451091 BICRAQ9NZM4 1560 aa45.15■■■■■ 4.82
PABPC4-207ENST00000451091 PABPN1Q86U42 306 aaKnown RBP eCLIP45.02■■■■■ 4.8
PABPC4-207ENST00000451091 SHROOM4Q9ULL8 1493 aa44.84■■■■■ 4.77
PABPC4-207ENST00000451091 EIF4G1Q04637 1599 aaKnown RBP43.92■■■■■ 4.62
PABPC4-207ENST00000451091 DNAJC5BQ9UF47 199 aa43.87■■■■■ 4.61
PABPC4-207ENST00000451091 CC2D2AQ9P2K1 1620 aa43.63■■■■■ 4.58
PABPC4-207ENST00000451091 CECR2Q9BXF3 1484 aa43.55■■■■■ 4.56
PABPC4-207ENST00000451091 BAZ1AQ9NRL2 1556 aaPredicted RBP43.44■■■■■ 4.54
PABPC4-207ENST00000451091 SMARCA4P51532 1647 aa43.4■■■■■ 4.54
PABPC4-207ENST00000451091 MROH2BQ7Z745 1585 aa43.16■■■■■ 4.5
PABPC4-207ENST00000451091 SMARCA2P51531 1590 aa43.08■■■■■ 4.49
PABPC4-207ENST00000451091 ATAD2BQ9ULI0 1458 aa43.07■■■■■ 4.49
PABPC4-207ENST00000451091 PEG3Q9GZU2 1588 aa43.06■■■■■ 4.48
PABPC4-207ENST00000451091 NCAPD3P42695 1498 aa43.06■■■■■ 4.48
PABPC4-207ENST00000451091 HMGXB3Q12766 1538 aa42.87■■■■■ 4.45
PABPC4-207ENST00000451091 RSF1Q96T23 1441 aaPredicted RBP42.82■■■■■ 4.45
PABPC4-207ENST00000451091 BAZ1BQ9UIG0 1483 aaKnown RBP42.72■■■■■ 4.43
PABPC4-207ENST00000451091 WIZO95785 1651 aa42.7■■■■■ 4.43
PABPC4-207ENST00000451091 TOP2AP11388 1531 aaKnown RBP42.31■■■■■ 4.36
PABPC4-207ENST00000451091 SUPT5HO00267 1087 aaKnown RBP41.89■■■■■ 4.3
PABPC4-207ENST00000451091 LAMC3Q9Y6N6 1575 aa41.86■■■■■ 4.29
PABPC4-207ENST00000451091 CCDC88BA6NC98 1476 aa41.8■■■■■ 4.28
PABPC4-207ENST00000451091 CADPSQ9ULU8 1353 aa41.78■■■■■ 4.28
PABPC4-207ENST00000451091 NESP48681 1621 aa41.77■■■■■ 4.28
PABPC4-207ENST00000451091 CFTRP13569 1480 aa41.63■■■■■ 4.25
PABPC4-207ENST00000451091 PDS5BQ9NTI5 1447 aa41.54■■■■■ 4.24
PABPC4-207ENST00000451091 ERCC6Q03468 1493 aa41.48■■■■■ 4.23
PABPC4-207ENST00000451091 PRDM2Q13029 1718 aa41.37■■■■■ 4.21
PABPC4-207ENST00000451091 KIF21AQ7Z4S6 1674 aa41.33■■■■■ 4.21
PABPC4-207ENST00000451091 FANCD2Q9BXW9 1451 aa41.27■■■■■ 4.2
PABPC4-207ENST00000451091 CEP164Q9UPV0 1460 aa41.18■■■■■ 4.18
PABPC4-207ENST00000451091 THOC2Q8NI27 1593 aaKnown RBP41.12■■■■■ 4.17
PABPC4-207ENST00000451091 MRC2Q9UBG0 1479 aa41.05■■■■■ 4.16
PABPC4-207ENST00000451091 CUX2O14529 1486 aa41.02■■■■■ 4.16
PABPC4-207ENST00000451091 WDR62O43379 1518 aa40.93■■■■■ 4.14
PABPC4-207ENST00000451091 URB2Q14146 1524 aaKnown RBP40.82■■■■■ 4.12
PABPC4-207ENST00000451091 ABCC8Q09428 1581 aa40.78■■■■■ 4.12
PABPC4-207ENST00000451091 TOPBP1Q92547 1522 aa40.66■■■■■ 4.1
PABPC4-207ENST00000451091 DNMBPQ6XZF7 1577 aa40.65■■■■■ 4.1
PABPC4-207ENST00000451091 CUX1P39880 1505 aa40.47■■■■■ 4.07
PABPC4-207ENST00000451091 WRNQ14191 1432 aaPredicted RBP eCLIP40.36■■■■■ 4.05
PABPC4-207ENST00000451091 IFT140Q96RY7 1462 aa40.34■■■■■ 4.05
PABPC4-207ENST00000451091 POLA1P09884 1462 aaPredicted RBP40.32■■■■■ 4.04
PABPC4-207ENST00000451091 TOP2BQ02880 1626 aa40.27■■■■■ 4.04
PABPC4-207ENST00000451091 BIVM-ERCC5R4GMW8 1640 aa40.27■■■■■ 4.04
PABPC4-207ENST00000451091 FGD5Q6ZNL6 1462 aa40.26■■■■■ 4.04
PABPC4-207ENST00000451091 TARBP1Q13395 1621 aaKnown RBP40.21■■■■■ 4.03
PABPC4-207ENST00000451091 SYNJ1O43426 1573 aa40.2■■■■■ 4.03
PABPC4-207ENST00000451091 SOGA1O94964 1423 aa40.18■■■■■ 4.02
PABPC4-207ENST00000451091 RAD54L2Q9Y4B4 1467 aa40.09■■■■■ 4.01
PABPC4-207ENST00000451091 ZNF608Q9ULD9 1512 aaPredicted RBP40.04■■■■■ 4
PABPC4-207ENST00000451091 WDR97A6NE52 1622 aa40.01■■■■■ 4
PABPC4-207ENST00000451091 ABCA10Q8WWZ4 1543 aa39.96■■■■□ 3.99
PABPC4-207ENST00000451091 EIF4G3O43432 1585 aaKnown RBP39.93■■■■□ 3.98
PABPC4-207ENST00000451091 AQRO60306 1485 aaKnown RBP eCLIP39.88■■■■□ 3.971e-11■■■■□ 25.2
PABPC4-207ENST00000451091 TDRD9Q8NDG6 1382 aaKnown RBP39.85■■■■□ 3.97
PABPC4-207ENST00000451091 ABCA5Q8WWZ7 1642 aa39.74■■■■□ 3.95
PABPC4-207ENST00000451091 GAPVD1Q14C86 1478 aa39.73■■■■□ 3.95
PABPC4-207ENST00000451091 GRIN2BQ13224 1484 aa39.68■■■■□ 3.94
PABPC4-207ENST00000451091 TRIM41Q8WV44 630 aa39.63■■■■□ 3.93
PABPC4-207ENST00000451091 PBRM1Q86U86 1689 aa39.6■■■■□ 3.93
PABPC4-207ENST00000451091 MAGI1Q96QZ7 1491 aaPredicted RBP39.56■■■■□ 3.92
PABPC4-207ENST00000451091 SNAPC4Q5SXM2 1469 aa39.51■■■■□ 3.92
PABPC4-207ENST00000451091 KIF27Q86VH2 1401 aa39.51■■■■□ 3.92
PABPC4-207ENST00000451091 ERICH3Q5RHP9 1530 aa39.5■■■■□ 3.91
PABPC4-207ENST00000451091 CHIC1Q5VXU3 224 aa39.39■■■■□ 3.9
PABPC4-207ENST00000451091 SYNJ2O15056 1496 aa39.38■■■■□ 3.9
PABPC4-207ENST00000451091 OSCARQ8IYS5 282 aa39.37■■■■□ 3.89
PABPC4-207ENST00000451091 CHD1O14646 1710 aa39.36■■■■□ 3.89
PABPC4-207ENST00000451091 ADAMTS12P58397 1594 aa39.31■■■■□ 3.88
PABPC4-207ENST00000451091 DNAJC5Q9H3Z4 198 aa39.31■■■■□ 3.88
PABPC4-207ENST00000451091 IGF1RP08069 1367 aa39.31■■■■□ 3.88
PABPC4-207ENST00000451091 FHAD1B1AJZ9 1412 aa39.31■■■■□ 3.88
PABPC4-207ENST00000451091 CHMP7Q8WUX9 453 aaPredicted RBP39.3■■■■□ 3.88
PABPC4-207ENST00000451091 FBLN2P98095 1184 aa39.27■■■■□ 3.88
PABPC4-207ENST00000451091 CUL7Q14999 1698 aa39.2■■■■□ 3.87
PABPC4-207ENST00000451091 RUSC2Q8N2Y8 1516 aa39.18■■■■□ 3.86
PABPC4-207ENST00000451091 GRIN2AQ12879 1464 aa39.16■■■■□ 3.86
PABPC4-207ENST00000451091 CARMIL1Q5VZK9 1371 aa39.07■■■■□ 3.84
PABPC4-207ENST00000451091 EEA1Q15075 1411 aa39.06■■■■□ 3.84
PABPC4-207ENST00000451091 NUP160Q12769 1436 aa38.99■■■■□ 3.83
PABPC4-207ENST00000451091 CLASP1Q7Z460 1538 aa38.98■■■■□ 3.83
PABPC4-207ENST00000451091 CEP170Q5SW79 1584 aa38.92■■■■□ 3.82
PABPC4-207ENST00000451091 CSRNP3Q8WYN3 585 aa38.9■■■■□ 3.82
PABPC4-207ENST00000451091 RAPGEF2Q9Y4G8 1499 aa38.89■■■■□ 3.82
PABPC4-207ENST00000451091 PRXQ9BXM0 1461 aa38.86■■■■□ 3.81
PABPC4-207ENST00000451091 KIAA0586Q9BVV6 1533 aa38.73■■■■□ 3.79
PABPC4-207ENST00000451091 ARHGEF11O15085 1522 aa38.68■■■■□ 3.78
PABPC4-207ENST00000451091 SHROOM2Q13796 1616 aa38.68■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms