RNA–Protein interactions for RNA: ENST00000504023.1

MATR3-207, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-207ENST00000504023 AEBP2Q6ZN18 517 aaPredicted RBP20.98■□□□□ 0.95
MATR3-207ENST00000504023 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
MATR3-207ENST00000504023 NISCHQ9Y2I1 1504 aa19.54■□□□□ 0.72
MATR3-207ENST00000504023 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
MATR3-207ENST00000504023 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
MATR3-207ENST00000504023 CCDC180Q9P1Z9 1646 aa17.53■□□□□ 0.4
MATR3-207ENST00000504023 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
MATR3-207ENST00000504023 FOXD1Q16676 465 aa16.94■□□□□ 0.3
MATR3-207ENST00000504023 ABCC9O60706 1549 aa16.91■□□□□ 0.3
MATR3-207ENST00000504023 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
MATR3-207ENST00000504023 NACADO15069 1562 aa16.35■□□□□ 0.21
MATR3-207ENST00000504023 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
MATR3-207ENST00000504023 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
MATR3-207ENST00000504023 MSH5O43196 834 aa16.25■□□□□ 0.19
MATR3-207ENST00000504023 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
MATR3-207ENST00000504023 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
MATR3-207ENST00000504023 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
MATR3-207ENST00000504023 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
MATR3-207ENST00000504023 SCRIBQ14160 1630 aa15.89■□□□□ 0.13
MATR3-207ENST00000504023 PIAS4Q8N2W9 510 aaPredicted RBP15.76■□□□□ 0.11
MATR3-207ENST00000504023 SHROOM4Q9ULL8 1493 aa15.73■□□□□ 0.11
MATR3-207ENST00000504023 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
MATR3-207ENST00000504023 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
MATR3-207ENST00000504023 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
MATR3-207ENST00000504023 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
MATR3-207ENST00000504023 PLPPR3Q6T4P5 718 aa15.34■□□□□ 0.05
MATR3-207ENST00000504023 SMARCA4P51532 1647 aa15.23■□□□□ 0.03
MATR3-207ENST00000504023 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
MATR3-207ENST00000504023 ADRA2BP18089 450 aa15.21■□□□□ 0.03
MATR3-207ENST00000504023 CECR2Q9BXF3 1484 aa15.19■□□□□ 0.02
MATR3-207ENST00000504023 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
MATR3-207ENST00000504023 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
MATR3-207ENST00000504023 SMARCA2P51531 1590 aa15.07■□□□□ 0
MATR3-207ENST00000504023 MROH2BQ7Z745 1585 aa15.05■□□□□ -0
MATR3-207ENST00000504023 HMGXB3Q12766 1538 aa15.04■□□□□ -0
MATR3-207ENST00000504023 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
MATR3-207ENST00000504023 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
MATR3-207ENST00000504023 WIZO95785 1651 aa14.96□□□□□ -0.01
MATR3-207ENST00000504023 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
MATR3-207ENST00000504023 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
MATR3-207ENST00000504023 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
MATR3-207ENST00000504023 LAMC3Q9Y6N6 1575 aa14.71□□□□□ -0.05
MATR3-207ENST00000504023 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
MATR3-207ENST00000504023 NESP48681 1621 aa14.66□□□□□ -0.06
MATR3-207ENST00000504023 KIF21AQ7Z4S6 1674 aa14.65□□□□□ -0.06
MATR3-207ENST00000504023 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
MATR3-207ENST00000504023 THOC2Q8NI27 1593 aaKnown RBP14.56□□□□□ -0.08
MATR3-207ENST00000504023 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
MATR3-207ENST00000504023 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
MATR3-207ENST00000504023 CFTRP13569 1480 aa14.51□□□□□ -0.09
MATR3-207ENST00000504023 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
MATR3-207ENST00000504023 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
MATR3-207ENST00000504023 CUX2O14529 1486 aa14.44□□□□□ -0.1
MATR3-207ENST00000504023 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
MATR3-207ENST00000504023 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
MATR3-207ENST00000504023 WDR62O43379 1518 aa14.41□□□□□ -0.1
MATR3-207ENST00000504023 MRC2Q9UBG0 1479 aa14.4□□□□□ -0.1
MATR3-207ENST00000504023 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
MATR3-207ENST00000504023 URB2Q14146 1524 aaKnown RBP14.31□□□□□ -0.12
MATR3-207ENST00000504023 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
MATR3-207ENST00000504023 TOPBP1Q92547 1522 aa14.22□□□□□ -0.13
MATR3-207ENST00000504023 DMRT2Q9Y5R5 561 aa14.21□□□□□ -0.13
MATR3-207ENST00000504023 ABCC8Q09428 1581 aa14.21□□□□□ -0.14
MATR3-207ENST00000504023 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
MATR3-207ENST00000504023 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
MATR3-207ENST00000504023 CUX1P39880 1505 aa14.14□□□□□ -0.15
MATR3-207ENST00000504023 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
MATR3-207ENST00000504023 BIVM-ERCC5R4GMW8 1640 aa14.12□□□□□ -0.15
MATR3-207ENST00000504023 POLA1P09884 1462 aaPredicted RBP14.1□□□□□ -0.15
MATR3-207ENST00000504023 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
MATR3-207ENST00000504023 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
MATR3-207ENST00000504023 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
MATR3-207ENST00000504023 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
MATR3-207ENST00000504023 SYNJ1O43426 1573 aa14.06□□□□□ -0.16
MATR3-207ENST00000504023 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
MATR3-207ENST00000504023 ZNF608Q9ULD9 1512 aaPredicted RBP14.03□□□□□ -0.16
MATR3-207ENST00000504023 PBRM1Q86U86 1689 aa14.01□□□□□ -0.17
MATR3-207ENST00000504023 WRNQ14191 1432 aaPredicted RBP eCLIP14□□□□□ -0.17
MATR3-207ENST00000504023 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
MATR3-207ENST00000504023 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
MATR3-207ENST00000504023 CHD1O14646 1710 aa13.97□□□□□ -0.17
MATR3-207ENST00000504023 SOGA1O94964 1423 aa13.96□□□□□ -0.18
MATR3-207ENST00000504023 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
MATR3-207ENST00000504023 ABCA10Q8WWZ4 1543 aa13.93□□□□□ -0.18
MATR3-207ENST00000504023 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.18
MATR3-207ENST00000504023 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
MATR3-207ENST00000504023 GRIN2BQ13224 1484 aa13.85□□□□□ -0.19
MATR3-207ENST00000504023 GAPVD1Q14C86 1478 aa13.85□□□□□ -0.19
MATR3-207ENST00000504023 SNAPC4Q5SXM2 1469 aa13.84□□□□□ -0.19
MATR3-207ENST00000504023 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
MATR3-207ENST00000504023 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
MATR3-207ENST00000504023 ADAMTS12P58397 1594 aa13.83□□□□□ -0.2
MATR3-207ENST00000504023 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
MATR3-207ENST00000504023 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
MATR3-207ENST00000504023 CUL7Q14999 1698 aa13.75□□□□□ -0.21
MATR3-207ENST00000504023 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
MATR3-207ENST00000504023 RNF39Q9H2S5 420 aa13.71□□□□□ -0.21
MATR3-207ENST00000504023 GRIN2AQ12879 1464 aa13.7□□□□□ -0.22
MATR3-207ENST00000504023 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
MATR3-207ENST00000504023 RIMBP3CA6NJZ7 1639 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms