RNA–Protein interactions for RNA: ENST00000410030.1

MRPL38-202, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 4

Gene MRPL38, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-202ENST00000410030 NISCHQ9Y2I1 1504 aa64.45■■■■■ 7.91
MRPL38-202ENST00000410030 ABCC9O60706 1549 aa58.03■■■■■ 6.88
MRPL38-202ENST00000410030 CCDC180Q9P1Z9 1646 aa57.87■■■■■ 6.86
MRPL38-202ENST00000410030 RB1CC1Q8TDY2 1594 aa55.14■■■■■ 6.42
MRPL38-202ENST00000410030 NACADO15069 1562 aa54.73■■■■■ 6.35
MRPL38-202ENST00000410030 DNAJC5BQ9UF47 199 aa54.55■■■■■ 6.32
MRPL38-202ENST00000410030 DCAF8L2P0C7V8 631 aa54.44■■■■■ 6.31
MRPL38-202ENST00000410030 PABPN1Q86U42 306 aaKnown RBP eCLIP54.01■■■■■ 6.24
MRPL38-202ENST00000410030 MYO15BQ96JP2 1530 aa53.93■■■■■ 6.22
MRPL38-202ENST00000410030 UNC13AQ9UPW8 1703 aa53.93■■■■■ 6.22
MRPL38-202ENST00000410030 BICRAQ9NZM4 1560 aa53.59■■■■■ 6.17
MRPL38-202ENST00000410030 ZCCHC6Q5VYS8 1495 aaKnown RBP53.41■■■■■ 6.14
MRPL38-202ENST00000410030 DCAF1Q9Y4B6 1507 aa53.21■■■■■ 6.11
MRPL38-202ENST00000410030 SHROOM4Q9ULL8 1493 aa52.8■■■■■ 6.04
MRPL38-202ENST00000410030 SCRIBQ14160 1630 aa52.77■■■■■ 6.04
MRPL38-202ENST00000410030 CC2D2AQ9P2K1 1620 aa52.4■■■■■ 5.98
MRPL38-202ENST00000410030 CECR2Q9BXF3 1484 aa52.27■■■■■ 5.96
MRPL38-202ENST00000410030 EIF4G1Q04637 1599 aaKnown RBP52.26■■■■■ 5.96
MRPL38-202ENST00000410030 NCAPD3P42695 1498 aa50.54■■■■■ 5.68
MRPL38-202ENST00000410030 ATAD2BQ9ULI0 1458 aa50.39■■■■■ 5.66
MRPL38-202ENST00000410030 SMARCA4P51532 1647 aa50.32■■■■■ 5.65
MRPL38-202ENST00000410030 SMARCA2P51531 1590 aa50.22■■■■■ 5.63
MRPL38-202ENST00000410030 HMGXB3Q12766 1538 aa50.16■■■■■ 5.62
MRPL38-202ENST00000410030 DNAJC5Q9H3Z4 198 aa50.13■■■■■ 5.62
MRPL38-202ENST00000410030 ERCC6Q03468 1493 aa50.08■■■■■ 5.61
MRPL38-202ENST00000410030 BAZ1AQ9NRL2 1556 aaPredicted RBP50.04■■■■■ 5.6
MRPL38-202ENST00000410030 CUX2O14529 1486 aa50.02■■■■■ 5.6
MRPL38-202ENST00000410030 BAZ1BQ9UIG0 1483 aaKnown RBP49.89■■■■■ 5.58
MRPL38-202ENST00000410030 NESP48681 1621 aa49.84■■■■■ 5.57
MRPL38-202ENST00000410030 PEG3Q9GZU2 1588 aa49.81■■■■■ 5.56
MRPL38-202ENST00000410030 MROH2BQ7Z745 1585 aa49.7■■■■■ 5.55
MRPL38-202ENST00000410030 LAMC3Q9Y6N6 1575 aa49.42■■■■■ 5.5
MRPL38-202ENST00000410030 THOC2Q8NI27 1593 aaKnown RBP49.34■■■■■ 5.49
MRPL38-202ENST00000410030 KIF21AQ7Z4S6 1674 aa49.17■■■■■ 5.46
MRPL38-202ENST00000410030 PDS5BQ9NTI5 1447 aa49.12■■■■■ 5.45
MRPL38-202ENST00000410030 WIZO95785 1651 aa49.09■■■■■ 5.45
MRPL38-202ENST00000410030 CADPSQ9ULU8 1353 aa49■■■■■ 5.43
MRPL38-202ENST00000410030 MRC2Q9UBG0 1479 aa48.74■■■■■ 5.39
MRPL38-202ENST00000410030 WDR62O43379 1518 aa48.63■■■■■ 5.38
MRPL38-202ENST00000410030 RSF1Q96T23 1441 aaPredicted RBP48.6■■■■■ 5.37
MRPL38-202ENST00000410030 CEP164Q9UPV0 1460 aa48.53■■■■■ 5.36
MRPL38-202ENST00000410030 FANCD2Q9BXW9 1451 aa48.47■■■■■ 5.35
MRPL38-202ENST00000410030 TOP2AP11388 1531 aaKnown RBP48.45■■■■■ 5.35
MRPL38-202ENST00000410030 CFTRP13569 1480 aa48.42■■■■■ 5.34
MRPL38-202ENST00000410030 URB2Q14146 1524 aaKnown RBP48.1■■■■■ 5.29
MRPL38-202ENST00000410030 PRDM2Q13029 1718 aa47.92■■■■■ 5.26
MRPL38-202ENST00000410030 TRIM41Q8WV44 630 aa47.91■■■■■ 5.26
MRPL38-202ENST00000410030 CCDC88BA6NC98 1476 aa47.9■■■■■ 5.26
MRPL38-202ENST00000410030 OSCARQ8IYS5 282 aa47.71■■■■■ 5.23
MRPL38-202ENST00000410030 IFT140Q96RY7 1462 aa47.54■■■■■ 5.2
MRPL38-202ENST00000410030 TOPBP1Q92547 1522 aa47.54■■■■■ 5.2
MRPL38-202ENST00000410030 ZNF608Q9ULD9 1512 aaPredicted RBP47.52■■■■■ 5.2
MRPL38-202ENST00000410030 ABCC8Q09428 1581 aa47.37■■■■■ 5.17
MRPL38-202ENST00000410030 DNMBPQ6XZF7 1577 aa47.34■■■■■ 5.17
MRPL38-202ENST00000410030 EIF4G3O43432 1585 aaKnown RBP47.24■■■■■ 5.15
MRPL38-202ENST00000410030 RIMBP3CA6NJZ7 1639 aa47.15■■■■■ 5.14
MRPL38-202ENST00000410030 RIMBP3BA6NNM3 1639 aa47.15■■■■■ 5.14
MRPL38-202ENST00000410030 RIMBP3Q9UFD9 1639 aa47.15■■■■■ 5.14
MRPL38-202ENST00000410030 TARBP1Q13395 1621 aaKnown RBP47.13■■■■■ 5.14
MRPL38-202ENST00000410030 AQRO60306 1485 aaKnown RBP eCLIP47.07■■■■■ 5.133e-7■■□□□ 13.5
MRPL38-202ENST00000410030 POLA1P09884 1462 aaPredicted RBP47.05■■■■■ 5.12
MRPL38-202ENST00000410030 ARHGEF11O15085 1522 aa46.99■■■■■ 5.11
MRPL38-202ENST00000410030 CHD1O14646 1710 aa46.91■■■■■ 5.1
MRPL38-202ENST00000410030 RAD54L2Q9Y4B4 1467 aa46.89■■■■■ 5.1
MRPL38-202ENST00000410030 SOGA1O94964 1423 aa46.81■■■■■ 5.08
MRPL38-202ENST00000410030 TDRD9Q8NDG6 1382 aaKnown RBP46.76■■■■■ 5.08
MRPL38-202ENST00000410030 FBLN2P98095 1184 aa46.76■■■■■ 5.08
MRPL38-202ENST00000410030 FGD5Q6ZNL6 1462 aa46.75■■■■■ 5.07
MRPL38-202ENST00000410030 CUX1P39880 1505 aa46.69■■■■■ 5.07
MRPL38-202ENST00000410030 CYB5RLQ6IPT4 315 aa46.63■■■■■ 5.06
MRPL38-202ENST00000410030 WDR97A6NE52 1622 aa46.6■■■■■ 5.05
MRPL38-202ENST00000410030 SNAPC4Q5SXM2 1469 aa46.59■■■■■ 5.05
MRPL38-202ENST00000410030 ARAP1Q96P48 1450 aa46.53■■■■■ 5.04
MRPL38-202ENST00000410030 MAGI1Q96QZ7 1491 aaPredicted RBP46.43■■■■■ 5.02
MRPL38-202ENST00000410030 GRIN2BQ13224 1484 aa46.42■■■■■ 5.02
MRPL38-202ENST00000410030 CHMP7Q8WUX9 453 aaPredicted RBP46.38■■■■■ 5.02
MRPL38-202ENST00000410030 CLASP1Q7Z460 1538 aa46.38■■■■■ 5.01
MRPL38-202ENST00000410030 SUPT5HO00267 1087 aaKnown RBP46.36■■■■■ 5.01
MRPL38-202ENST00000410030 SYNJ1O43426 1573 aa46.31■■■■■ 5
MRPL38-202ENST00000410030 SYNJ2O15056 1496 aa46.28■■■■■ 5
MRPL38-202ENST00000410030 GAPVD1Q14C86 1478 aa46.25■■■■■ 4.99
MRPL38-202ENST00000410030 PBRM1Q86U86 1689 aa46.24■■■■■ 4.99
MRPL38-202ENST00000410030 ABCA10Q8WWZ4 1543 aa46.18■■■■■ 4.98
MRPL38-202ENST00000410030 ABCA5Q8WWZ7 1642 aa46.15■■■■■ 4.98
MRPL38-202ENST00000410030 TRHP20396 242 aaPredicted RBP46.14■■■■■ 4.98
MRPL38-202ENST00000410030 WRNQ14191 1432 aaPredicted RBP eCLIP45.96■■■■■ 4.95
MRPL38-202ENST00000410030 BIVM-ERCC5R4GMW8 1640 aa45.9■■■■■ 4.94
MRPL38-202ENST00000410030 TOP2BQ02880 1626 aa45.89■■■■■ 4.94
MRPL38-202ENST00000410030 GRIN2AQ12879 1464 aa45.84■■■■■ 4.93
MRPL38-202ENST00000410030 ADAMTS12P58397 1594 aa45.81■■■■■ 4.92
MRPL38-202ENST00000410030 CEP170Q5SW79 1584 aa45.71■■■■■ 4.91
MRPL38-202ENST00000410030 NUP160Q12769 1436 aa45.69■■■■■ 4.9
MRPL38-202ENST00000410030 ERCC6L2Q5T890 1561 aa45.68■■■■■ 4.9
MRPL38-202ENST00000410030 FHAD1B1AJZ9 1412 aa45.65■■■■■ 4.9
MRPL38-202ENST00000410030 ERICH3Q5RHP9 1530 aa45.6■■■■■ 4.89
MRPL38-202ENST00000410030 SHROOM2Q13796 1616 aa45.5■■■■■ 4.87
MRPL38-202ENST00000410030 PRG4Q92954 1404 aaPredicted RBP45.26■■■■■ 4.84
MRPL38-202ENST00000410030 JPH4Q96JJ6 628 aa45.19■■■■■ 4.82
MRPL38-202ENST00000410030 RUSC2Q8N2Y8 1516 aa45.17■■■■■ 4.82
MRPL38-202ENST00000410030 IGF1RP08069 1367 aa44.99■■■■■ 4.79
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms