RNA–Protein interactions for RNA: ENST00000380637.7

SH3BGR-204, Transcript of SH3 domain binding glutamate rich protein, humanhuman

TSL 3 BASIC

Gene SH3BGR, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGR-204ENST00000380637 NISCHQ9Y2I1 1504 aa27.36■■□□□ 1.97
SH3BGR-204ENST00000380637 ABCC9O60706 1549 aa25.3■■□□□ 1.64
SH3BGR-204ENST00000380637 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
SH3BGR-204ENST00000380637 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
SH3BGR-204ENST00000380637 RB1CC1Q8TDY2 1594 aa23.72■■□□□ 1.39
SH3BGR-204ENST00000380637 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
SH3BGR-204ENST00000380637 NACADO15069 1562 aa23.42■■□□□ 1.34
SH3BGR-204ENST00000380637 DCAF8L2P0C7V8 631 aa23.34■■□□□ 1.33
SH3BGR-204ENST00000380637 UNC13AQ9UPW8 1703 aa23.32■■□□□ 1.32
SH3BGR-204ENST00000380637 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
SH3BGR-204ENST00000380637 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
SH3BGR-204ENST00000380637 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
SH3BGR-204ENST00000380637 CECR2Q9BXF3 1484 aa22.76■■□□□ 1.23
SH3BGR-204ENST00000380637 SCRIBQ14160 1630 aa22.64■■□□□ 1.22
SH3BGR-204ENST00000380637 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
SH3BGR-204ENST00000380637 EIF4G1Q04637 1599 aaKnown RBP22.6■■□□□ 1.21
SH3BGR-204ENST00000380637 SHROOM4Q9ULL8 1493 aa22.57■■□□□ 1.2
SH3BGR-204ENST00000380637 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
SH3BGR-204ENST00000380637 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
SH3BGR-204ENST00000380637 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
SH3BGR-204ENST00000380637 CHIC1Q5VXU3 224 aa22.06■■□□□ 1.12
SH3BGR-204ENST00000380637 CUX2O14529 1486 aa21.81■■□□□ 1.08
SH3BGR-204ENST00000380637 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
SH3BGR-204ENST00000380637 NESP48681 1621 aa21.65■■□□□ 1.06
SH3BGR-204ENST00000380637 NCAPD3P42695 1498 aa21.64■■□□□ 1.06
SH3BGR-204ENST00000380637 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.05
SH3BGR-204ENST00000380637 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
SH3BGR-204ENST00000380637 HMGXB3Q12766 1538 aa21.45■■□□□ 1.02
SH3BGR-204ENST00000380637 THOC2Q8NI27 1593 aaKnown RBP21.45■■□□□ 1.02
SH3BGR-204ENST00000380637 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
SH3BGR-204ENST00000380637 BAZ1BQ9UIG0 1483 aaKnown RBP21.34■■□□□ 1.01
SH3BGR-204ENST00000380637 TRIM41Q8WV44 630 aa21.32■■□□□ 1
SH3BGR-204ENST00000380637 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
SH3BGR-204ENST00000380637 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
SH3BGR-204ENST00000380637 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
SH3BGR-204ENST00000380637 PEG3Q9GZU2 1588 aa21.18■□□□□ 0.98
SH3BGR-204ENST00000380637 MROH2BQ7Z745 1585 aa21.17■□□□□ 0.98
SH3BGR-204ENST00000380637 PDS5BQ9NTI5 1447 aa21.09■□□□□ 0.97
SH3BGR-204ENST00000380637 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.96
SH3BGR-204ENST00000380637 WDR62O43379 1518 aa20.99■□□□□ 0.95
SH3BGR-204ENST00000380637 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
SH3BGR-204ENST00000380637 WIZO95785 1651 aa20.9■□□□□ 0.94
SH3BGR-204ENST00000380637 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
SH3BGR-204ENST00000380637 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
SH3BGR-204ENST00000380637 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
SH3BGR-204ENST00000380637 OSCARQ8IYS5 282 aa20.72■□□□□ 0.91
SH3BGR-204ENST00000380637 CFTRP13569 1480 aa20.66■□□□□ 0.9
SH3BGR-204ENST00000380637 RIMBP3CA6NJZ7 1639 aa20.66■□□□□ 0.9
SH3BGR-204ENST00000380637 RIMBP3BA6NNM3 1639 aa20.66■□□□□ 0.9
SH3BGR-204ENST00000380637 RIMBP3Q9UFD9 1639 aa20.66■□□□□ 0.9
SH3BGR-204ENST00000380637 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.88
SH3BGR-204ENST00000380637 ARHGEF11O15085 1522 aa20.53■□□□□ 0.88
SH3BGR-204ENST00000380637 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
SH3BGR-204ENST00000380637 RSF1Q96T23 1441 aaPredicted RBP20.52■□□□□ 0.87
SH3BGR-204ENST00000380637 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
SH3BGR-204ENST00000380637 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
SH3BGR-204ENST00000380637 EIF4G3O43432 1585 aaKnown RBP20.39■□□□□ 0.85
SH3BGR-204ENST00000380637 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
SH3BGR-204ENST00000380637 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
SH3BGR-204ENST00000380637 CHD1O14646 1710 aa20.34■□□□□ 0.85
SH3BGR-204ENST00000380637 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
SH3BGR-204ENST00000380637 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
SH3BGR-204ENST00000380637 TRHP20396 242 aaPredicted RBP20.29■□□□□ 0.84
SH3BGR-204ENST00000380637 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.84
SH3BGR-204ENST00000380637 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
SH3BGR-204ENST00000380637 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
SH3BGR-204ENST00000380637 FBLN2P98095 1184 aa20.21■□□□□ 0.83
SH3BGR-204ENST00000380637 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
SH3BGR-204ENST00000380637 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
SH3BGR-204ENST00000380637 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
SH3BGR-204ENST00000380637 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
SH3BGR-204ENST00000380637 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
SH3BGR-204ENST00000380637 CLASP1Q7Z460 1538 aa20.06■□□□□ 0.8
SH3BGR-204ENST00000380637 SOGA1O94964 1423 aa19.99■□□□□ 0.79
SH3BGR-204ENST00000380637 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
SH3BGR-204ENST00000380637 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
SH3BGR-204ENST00000380637 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
SH3BGR-204ENST00000380637 CUX1P39880 1505 aa19.91■□□□□ 0.78
SH3BGR-204ENST00000380637 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
SH3BGR-204ENST00000380637 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
SH3BGR-204ENST00000380637 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
SH3BGR-204ENST00000380637 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
SH3BGR-204ENST00000380637 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
SH3BGR-204ENST00000380637 ERCC6L2Q5T890 1561 aa19.83■□□□□ 0.77
SH3BGR-204ENST00000380637 PBRM1Q86U86 1689 aa19.82■□□□□ 0.76
SH3BGR-204ENST00000380637 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
SH3BGR-204ENST00000380637 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
SH3BGR-204ENST00000380637 GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
SH3BGR-204ENST00000380637 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
SH3BGR-204ENST00000380637 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
SH3BGR-204ENST00000380637 KIF13AQ9H1H9 1805 aa19.59■□□□□ 0.73
SH3BGR-204ENST00000380637 NUP160Q12769 1436 aa19.58■□□□□ 0.72
SH3BGR-204ENST00000380637 SHROOM2Q13796 1616 aa19.55■□□□□ 0.72
SH3BGR-204ENST00000380637 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
SH3BGR-204ENST00000380637 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
SH3BGR-204ENST00000380637 PRG4Q92954 1404 aaPredicted RBP19.44■□□□□ 0.7
SH3BGR-204ENST00000380637 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
SH3BGR-204ENST00000380637 TOP2BQ02880 1626 aa19.39■□□□□ 0.69
SH3BGR-204ENST00000380637 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
SH3BGR-204ENST00000380637 FAM69CQ0P6D2 419 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms