Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HTR1EP28566 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HTR1EP28566 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTR1EP28566 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTR1EP28566 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HTR1EP28566 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTR1EP28566 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTR1EP28566 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.98■□□□□ 0.47
HTR1EP28566 AC073592.3-201ENST00000625118 1834 ntBASIC17.98■□□□□ 0.47
HTR1EP28566 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.98■□□□□ 0.47
HTR1EP28566 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTR1EP28566 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HTR1EP28566 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HTR1EP28566 TMPOP1-202ENST00000424642 1267 ntBASIC17.98■□□□□ 0.47
HTR1EP28566 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.98■□□□□ 0.47
HTR1EP28566 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.98■□□□□ 0.47
HTR1EP28566 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.98■□□□□ 0.47
HTR1EP28566 RARRES2P10-201ENST00000564312 460 ntBASIC17.98■□□□□ 0.47
HTR1EP28566 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTR1EP28566 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTR1EP28566 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.98■□□□□ 0.47
HTR1EP28566 AP000997.3-201ENST00000623333 2250 ntBASIC17.98■□□□□ 0.47
HTR1EP28566 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.98■□□□□ 0.47
HTR1EP28566 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTR1EP28566 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTR1EP28566 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HTR1EP28566 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.98■□□□□ 0.47
HTR1EP28566 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HTR1EP28566 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HTR1EP28566 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
HTR1EP28566 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.97■□□□□ 0.47
HTR1EP28566 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.97■□□□□ 0.47
HTR1EP28566 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HTR1EP28566 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.97■□□□□ 0.47
HTR1EP28566 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.97■□□□□ 0.47
HTR1EP28566 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HTR1EP28566 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.97■□□□□ 0.47
HTR1EP28566 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.97■□□□□ 0.47
HTR1EP28566 CD177P1-201ENST00000606252 935 ntBASIC17.97■□□□□ 0.47
HTR1EP28566 AC006557.6-201ENST00000623071 864 ntBASIC17.97■□□□□ 0.47
HTR1EP28566 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.97■□□□□ 0.47
HTR1EP28566 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HTR1EP28566 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTR1EP28566 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
HTR1EP28566 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HTR1EP28566 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HTR1EP28566 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.96■□□□□ 0.47
HTR1EP28566 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HTR1EP28566 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
HTR1EP28566 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 ARMC10P1-201ENST00000313754 855 ntBASIC17.96■□□□□ 0.47
HTR1EP28566 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.96■□□□□ 0.47
HTR1EP28566 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.96■□□□□ 0.47
HTR1EP28566 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.96■□□□□ 0.47
HTR1EP28566 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.96■□□□□ 0.47
HTR1EP28566 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.96■□□□□ 0.47
HTR1EP28566 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HTR1EP28566 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HTR1EP28566 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
HTR1EP28566 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 AP006587.1-201ENST00000534129 1502 ntBASIC17.96■□□□□ 0.47
HTR1EP28566 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1EP28566 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HTR1EP28566 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.96■□□□□ 0.47
HTR1EP28566 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HTR1EP28566 AL162741.1-201ENST00000565563 1558 ntBASIC17.96■□□□□ 0.46
HTR1EP28566 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1EP28566 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1EP28566 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1EP28566 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1EP28566 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1EP28566 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1EP28566 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.95■□□□□ 0.46
HTR1EP28566 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1EP28566 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.95■□□□□ 0.46
HTR1EP28566 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms