RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 DCAF8L2P0C7V8 631 aa33.24■■■□□ 2.91
PKD2-201ENST00000237596 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
PKD2-201ENST00000237596 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
PKD2-201ENST00000237596 SHROOM4Q9ULL8 1493 aa30.76■■■□□ 2.51
PKD2-201ENST00000237596 EHMT2Q96KQ7 1210 aa30.2■■■□□ 2.43
PKD2-201ENST00000237596 APLP2Q06481 763 aa29.72■■■□□ 2.35
PKD2-201ENST00000237596 FAM9AQ8IZU1 332 aaPredicted RBP29.51■■■□□ 2.31
PKD2-201ENST00000237596 TTBK1Q5TCY1 1321 aaPredicted RBP29.13■■■□□ 2.25
PKD2-201ENST00000237596 RANGAP1P46060 587 aaPredicted RBP29.01■■■□□ 2.24
PKD2-201ENST00000237596 TRIM41Q8WV44 630 aa28.99■■■□□ 2.23
PKD2-201ENST00000237596 PELP1Q8IZL8 1130 aaKnown RBP28.97■■■□□ 2.23
PKD2-201ENST00000237596 PCGF6Q9BYE7 350 aa28.83■■■□□ 2.21
PKD2-201ENST00000237596 ATP1B4Q9UN42 357 aaPredicted RBP28.8■■■□□ 2.2
PKD2-201ENST00000237596 UBTFP17480 764 aaKnown RBP28.7■■■□□ 2.18
PKD2-201ENST00000237596 CCER1Q8TC90 406 aaPredicted RBP28.45■■■□□ 2.14
PKD2-201ENST00000237596 ZEB1P37275 1124 aaPredicted RBP28.31■■■□□ 2.12
PKD2-201ENST00000237596 CENPBP07199 599 aaPredicted RBP28.1■■■□□ 2.09
PKD2-201ENST00000237596 PPARGC1BQ86YN6 1023 aaKnown RBP28.01■■■□□ 2.07
PKD2-201ENST00000237596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.89■■■□□ 2.06
PKD2-201ENST00000237596 HNRNPUL2Q1KMD3 747 aaKnown RBP27.89■■■□□ 2.06
PKD2-201ENST00000237596 MYT1LQ9UL68 1186 aa27.79■■■□□ 2.04
PKD2-201ENST00000237596 ITGAEP38570 1179 aa27.73■■■□□ 2.03
PKD2-201ENST00000237596 ERICH6Q7L0X2 663 aa27.69■■■□□ 2.02
PKD2-201ENST00000237596 TRIM26Q12899 539 aaPredicted RBP27.66■■■□□ 2.02
PKD2-201ENST00000237596 NEFLP07196 543 aa27.65■■■□□ 2.02
PKD2-201ENST00000237596 HRCP23327 699 aa27.64■■■□□ 2.02
PKD2-201ENST00000237596 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
PKD2-201ENST00000237596 YTHDC1Q96MU7 727 aaKnown RBP27.6■■■□□ 2.01
PKD2-201ENST00000237596 LOC105371045A0A1W2PR82 267 aa27.59■■■□□ 2.01
PKD2-201ENST00000237596 ABCC9O60706 1549 aa27.59■■■□□ 2.01
PKD2-201ENST00000237596 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
PKD2-201ENST00000237596 POLR3GLQ9BT43 218 aa27.41■■□□□ 1.98
PKD2-201ENST00000237596 CNGB1Q14028 1251 aaPredicted RBP27.11■■□□□ 1.93
PKD2-201ENST00000237596 FAM50AQ14320 339 aaKnown RBP27.05■■□□□ 1.92
PKD2-201ENST00000237596 MYT1Q01538 1121 aa27■■□□□ 1.91
PKD2-201ENST00000237596 SLC4A1APQ9BWU0 796 aaKnown RBP26.97■■□□□ 1.91
PKD2-201ENST00000237596 FBLN2P98095 1184 aa26.93■■□□□ 1.9
PKD2-201ENST00000237596 TRIM52Q96A61 297 aa26.9■■□□□ 1.9
PKD2-201ENST00000237596 DAXXQ9UER7 740 aaPredicted RBP26.79■■□□□ 1.88
PKD2-201ENST00000237596 NEUROD1Q13562 356 aa26.68■■□□□ 1.86
PKD2-201ENST00000237596 DIEXFQ68CQ4 756 aaKnown RBP26.59■■□□□ 1.85
PKD2-201ENST00000237596 ZNF326Q5BKZ1 582 aaKnown RBP26.57■■□□□ 1.84
PKD2-201ENST00000237596 P3H3Q8IVL6 736 aa26.56■■□□□ 1.84
PKD2-201ENST00000237596 CSRNP3Q8WYN3 585 aa26.55■■□□□ 1.84
PKD2-201ENST00000237596 ARID3CA6NKF2 412 aa26.51■■□□□ 1.83
PKD2-201ENST00000237596 CLSPNQ9HAW4 1339 aa26.42■■□□□ 1.82
PKD2-201ENST00000237596 SCRIBQ14160 1630 aa26.36■■□□□ 1.81
PKD2-201ENST00000237596 CDK11AQ9UQ88 783 aaPredicted RBP26.33■■□□□ 1.81
PKD2-201ENST00000237596 ZNF777Q9ULD5 760 aaPredicted RBP26.32■■□□□ 1.8
PKD2-201ENST00000237596 ANP32CO43423 234 aa26.28■■□□□ 1.8
PKD2-201ENST00000237596 BCANQ96GW7 911 aa26.25■■□□□ 1.79
PKD2-201ENST00000237596 GTF3C3Q9Y5Q9 886 aa26.22■■□□□ 1.79
PKD2-201ENST00000237596 ZNF316A6NFI3 1004 aaPredicted RBP26.14■■□□□ 1.77
PKD2-201ENST00000237596 ESF1Q9H501 851 aaKnown RBP26.08■■□□□ 1.77
PKD2-201ENST00000237596 ZCCHC6Q5VYS8 1495 aaKnown RBP26.08■■□□□ 1.77
PKD2-201ENST00000237596 NPM1P06748 294 aaKnown RBP eCLIP26.07■■□□□ 1.76
PKD2-201ENST00000237596 NEFMP07197 916 aa26.04■■□□□ 1.76
PKD2-201ENST00000237596 ZBTB47Q9UFB7 747 aaPredicted RBP26.04■■□□□ 1.76
PKD2-201ENST00000237596 SLC24A1O60721 1099 aa26.03■■□□□ 1.76
PKD2-201ENST00000237596 RTL5Q5HYW3 569 aaPredicted RBP25.99■■□□□ 1.75
PKD2-201ENST00000237596 CHGAP10645 457 aaKnown RBP25.93■■□□□ 1.74
PKD2-201ENST00000237596 ACIN1Q9UKV3 1341 aaKnown RBP25.93■■□□□ 1.74
PKD2-201ENST00000237596 CANXP27824 592 aaKnown RBP25.91■■□□□ 1.74
PKD2-201ENST00000237596 STAG3Q9UJ98 1225 aa25.9■■□□□ 1.74
PKD2-201ENST00000237596 BCL11AQ9H165 835 aa25.82■■□□□ 1.72
PKD2-201ENST00000237596 TONSLQ96HA7 1378 aa25.82■■□□□ 1.72
PKD2-201ENST00000237596 PLPPR3Q6T4P5 718 aa25.8■■□□□ 1.72
PKD2-201ENST00000237596 CHMP7Q8WUX9 453 aaPredicted RBP25.8■■□□□ 1.72
PKD2-201ENST00000237596 CHIC2Q9UKJ5 165 aa25.77■■□□□ 1.72
PKD2-201ENST00000237596 TSPY4P0CV99 314 aa25.73■■□□□ 1.71
PKD2-201ENST00000237596 TSPY10P0CW01 314 aa25.73■■□□□ 1.71
PKD2-201ENST00000237596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.72■■□□□ 1.712e-7■■■■□ 26.6
PKD2-201ENST00000237596 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
PKD2-201ENST00000237596 MTUS2Q5JR59 1369 aa25.66■■□□□ 1.7
PKD2-201ENST00000237596 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
PKD2-201ENST00000237596 SCAF1Q9H7N4 1312 aaKnown RBP25.6■■□□□ 1.69
PKD2-201ENST00000237596 DCAF1Q9Y4B6 1507 aa25.54■■□□□ 1.68
PKD2-201ENST00000237596 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
PKD2-201ENST00000237596 CLIP1P30622 1438 aa25.5■■□□□ 1.67
PKD2-201ENST00000237596 KDM2AQ9Y2K7 1162 aa25.48■■□□□ 1.67
PKD2-201ENST00000237596 KCNH8Q96L42 1107 aa25.46■■□□□ 1.67
PKD2-201ENST00000237596 HNRNPUQ00839 825 aaKnown RBP eCLIP25.45■■□□□ 1.66
PKD2-201ENST00000237596 FAM9BQ8IZU0 186 aa25.45■■□□□ 1.66
PKD2-201ENST00000237596 PLEKHD1A6NEE1 506 aa25.43■■□□□ 1.66
PKD2-201ENST00000237596 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
PKD2-201ENST00000237596 TMC1Q8TDI8 760 aa25.39■■□□□ 1.66
PKD2-201ENST00000237596 SALL2Q9Y467 1007 aaPredicted RBP25.39■■□□□ 1.65
PKD2-201ENST00000237596 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
PKD2-201ENST00000237596 RRP7BPQ9NSQ0 103 aa25.36■■□□□ 1.65
PKD2-201ENST00000237596 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
PKD2-201ENST00000237596 ANP32AP39687 249 aaKnown RBP25.33■■□□□ 1.65
PKD2-201ENST00000237596 EEA1Q15075 1411 aa25.33■■□□□ 1.64
PKD2-201ENST00000237596 NACADO15069 1562 aa25.31■■□□□ 1.64
PKD2-201ENST00000237596 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
PKD2-201ENST00000237596 FKBP8Q14318 412 aa25.28■■□□□ 1.64
PKD2-201ENST00000237596 WDR43Q15061 677 aaKnown RBP eCLIP25.27■■□□□ 1.64
PKD2-201ENST00000237596 NPM2Q86SE8 214 aaKnown RBP25.27■■□□□ 1.64
PKD2-201ENST00000237596 GOLGA3Q08378 1498 aa25.25■■□□□ 1.63
PKD2-201ENST00000237596 PPP1R15AO75807 674 aaPredicted RBP25.24■■□□□ 1.63
PKD2-201ENST00000237596 MRS2Q9HD23 443 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms