RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 NISCHQ9Y2I1 1504 aa47.94■■■■■ 5.26
MSGN1-201ENST00000281047 CCDC180Q9P1Z9 1646 aa42.86■■■■■ 4.45
MSGN1-201ENST00000281047 ABCC9O60706 1549 aa42.46■■■■■ 4.39
MSGN1-201ENST00000281047 RB1CC1Q8TDY2 1594 aa40.63■■■■■ 4.09
MSGN1-201ENST00000281047 NACADO15069 1562 aa40.44■■■■■ 4.06
MSGN1-201ENST00000281047 DCAF8L2P0C7V8 631 aa40.3■■■■■ 4.04
MSGN1-201ENST00000281047 MYO15BQ96JP2 1530 aa40.04■■■■■ 4
MSGN1-201ENST00000281047 ZCCHC6Q5VYS8 1495 aaKnown RBP39.82■■■■□ 3.97
MSGN1-201ENST00000281047 DCAF1Q9Y4B6 1507 aa39.65■■■■□ 3.94
MSGN1-201ENST00000281047 UNC13AQ9UPW8 1703 aa39.6■■■■□ 3.93
MSGN1-201ENST00000281047 PABPN1Q86U42 306 aaKnown RBP eCLIP39.57■■■■□ 3.93
MSGN1-201ENST00000281047 DNAJC5BQ9UF47 199 aa39.41■■■■□ 3.9
MSGN1-201ENST00000281047 BICRAQ9NZM4 1560 aa39.36■■■■□ 3.89
MSGN1-201ENST00000281047 SCRIBQ14160 1630 aa39.06■■■■□ 3.84
MSGN1-201ENST00000281047 SHROOM4Q9ULL8 1493 aa38.99■■■■□ 3.83
MSGN1-201ENST00000281047 EIF4G1Q04637 1599 aaKnown RBP38.4■■■■□ 3.74
MSGN1-201ENST00000281047 CC2D2AQ9P2K1 1620 aa38.37■■■■□ 3.73
MSGN1-201ENST00000281047 CECR2Q9BXF3 1484 aa38.22■■■■□ 3.71
MSGN1-201ENST00000281047 NCAPD3P42695 1498 aa37.33■■■■□ 3.57
MSGN1-201ENST00000281047 SMARCA4P51532 1647 aa37.3■■■■□ 3.56
MSGN1-201ENST00000281047 ATAD2BQ9ULI0 1458 aa37.25■■■■□ 3.55
MSGN1-201ENST00000281047 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
MSGN1-201ENST00000281047 BAZ1AQ9NRL2 1556 aaPredicted RBP37.21■■■■□ 3.55
MSGN1-201ENST00000281047 HMGXB3Q12766 1538 aa37.1■■■■□ 3.53
MSGN1-201ENST00000281047 PEG3Q9GZU2 1588 aa36.95■■■■□ 3.51
MSGN1-201ENST00000281047 BAZ1BQ9UIG0 1483 aaKnown RBP36.94■■■■□ 3.5
MSGN1-201ENST00000281047 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
MSGN1-201ENST00000281047 ERCC6Q03468 1493 aa36.69■■■■□ 3.46
MSGN1-201ENST00000281047 NESP48681 1621 aa36.56■■■■□ 3.44
MSGN1-201ENST00000281047 CUX2O14529 1486 aa36.48■■■■□ 3.43
MSGN1-201ENST00000281047 WIZO95785 1651 aa36.48■■■■□ 3.43
MSGN1-201ENST00000281047 LAMC3Q9Y6N6 1575 aa36.43■■■■□ 3.42
MSGN1-201ENST00000281047 RSF1Q96T23 1441 aaPredicted RBP36.32■■■■□ 3.4
MSGN1-201ENST00000281047 PDS5BQ9NTI5 1447 aa36.24■■■■□ 3.39
MSGN1-201ENST00000281047 CADPSQ9ULU8 1353 aa36.21■■■■□ 3.39
MSGN1-201ENST00000281047 THOC2Q8NI27 1593 aaKnown RBP36.13■■■■□ 3.37
MSGN1-201ENST00000281047 TOP2AP11388 1531 aaKnown RBP36.1■■■■□ 3.37
MSGN1-201ENST00000281047 KIF21AQ7Z4S6 1674 aa36.09■■■■□ 3.37
MSGN1-201ENST00000281047 DNAJC5Q9H3Z4 198 aa35.97■■■■□ 3.35
MSGN1-201ENST00000281047 CFTRP13569 1480 aa35.88■■■■□ 3.33
MSGN1-201ENST00000281047 MRC2Q9UBG0 1479 aa35.87■■■■□ 3.33
MSGN1-201ENST00000281047 CEP164Q9UPV0 1460 aa35.81■■■■□ 3.32
MSGN1-201ENST00000281047 FANCD2Q9BXW9 1451 aa35.8■■■■□ 3.32
MSGN1-201ENST00000281047 WDR62O43379 1518 aa35.75■■■■□ 3.31
MSGN1-201ENST00000281047 CCDC88BA6NC98 1476 aa35.67■■■■□ 3.3
MSGN1-201ENST00000281047 PRDM2Q13029 1718 aa35.51■■■■□ 3.27
MSGN1-201ENST00000281047 URB2Q14146 1524 aaKnown RBP35.45■■■■□ 3.27
MSGN1-201ENST00000281047 ABCC8Q09428 1581 aa35.16■■■■□ 3.22
MSGN1-201ENST00000281047 TOPBP1Q92547 1522 aa35.15■■■■□ 3.22
MSGN1-201ENST00000281047 IFT140Q96RY7 1462 aa35.09■■■■□ 3.21
MSGN1-201ENST00000281047 DNMBPQ6XZF7 1577 aa35.07■■■■□ 3.2
MSGN1-201ENST00000281047 SUPT5HO00267 1087 aaKnown RBP35.01■■■■□ 3.2
MSGN1-201ENST00000281047 ZNF608Q9ULD9 1512 aaPredicted RBP34.94■■■■□ 3.18
MSGN1-201ENST00000281047 OSCARQ8IYS5 282 aa34.88■■■■□ 3.17
MSGN1-201ENST00000281047 POLA1P09884 1462 aaPredicted RBP34.82■■■■□ 3.16
MSGN1-201ENST00000281047 EIF4G3O43432 1585 aaKnown RBP34.79■■■■□ 3.16
MSGN1-201ENST00000281047 TARBP1Q13395 1621 aaKnown RBP34.78■■■■□ 3.16
MSGN1-201ENST00000281047 AQRO60306 1485 aaKnown RBP eCLIP34.68■■■■□ 3.14
MSGN1-201ENST00000281047 SOGA1O94964 1423 aa34.68■■■■□ 3.14
MSGN1-201ENST00000281047 CUX1P39880 1505 aa34.67■■■■□ 3.14
MSGN1-201ENST00000281047 RAD54L2Q9Y4B4 1467 aa34.66■■■■□ 3.14
MSGN1-201ENST00000281047 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
MSGN1-201ENST00000281047 TRIM41Q8WV44 630 aa34.56■■■■□ 3.12
MSGN1-201ENST00000281047 TDRD9Q8NDG6 1382 aaKnown RBP34.54■■■■□ 3.12
MSGN1-201ENST00000281047 WDR97A6NE52 1622 aa34.53■■■■□ 3.12
MSGN1-201ENST00000281047 CHD1O14646 1710 aa34.42■■■■□ 3.1
MSGN1-201ENST00000281047 FBLN2P98095 1184 aa34.41■■■■□ 3.1
MSGN1-201ENST00000281047 SNAPC4Q5SXM2 1469 aa34.36■■■■□ 3.09
MSGN1-201ENST00000281047 GRIN2BQ13224 1484 aa34.35■■■■□ 3.09
MSGN1-201ENST00000281047 RIMBP3CA6NJZ7 1639 aa34.33■■■■□ 3.09
MSGN1-201ENST00000281047 RIMBP3BA6NNM3 1639 aa34.33■■■■□ 3.09
MSGN1-201ENST00000281047 RIMBP3Q9UFD9 1639 aa34.33■■■■□ 3.09
MSGN1-201ENST00000281047 MAGI1Q96QZ7 1491 aaPredicted RBP34.32■■■■□ 3.08
MSGN1-201ENST00000281047 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
MSGN1-201ENST00000281047 ARHGEF11O15085 1522 aa34.29■■■■□ 3.08
MSGN1-201ENST00000281047 WRNQ14191 1432 aaPredicted RBP eCLIP34.29■■■■□ 3.08
MSGN1-201ENST00000281047 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
MSGN1-201ENST00000281047 TOP2BQ02880 1626 aa34.24■■■■□ 3.07
MSGN1-201ENST00000281047 CHMP7Q8WUX9 453 aaPredicted RBP34.24■■■■□ 3.07
MSGN1-201ENST00000281047 BIVM-ERCC5R4GMW8 1640 aa34.23■■■■□ 3.07
MSGN1-201ENST00000281047 ABCA5Q8WWZ7 1642 aa34.19■■■■□ 3.06
MSGN1-201ENST00000281047 PBRM1Q86U86 1689 aa34.19■■■■□ 3.06
MSGN1-201ENST00000281047 SYNJ2O15056 1496 aa34.19■■■■□ 3.06
MSGN1-201ENST00000281047 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
MSGN1-201ENST00000281047 CLASP1Q7Z460 1538 aa34.06■■■■□ 3.04
MSGN1-201ENST00000281047 CYB5RLQ6IPT4 315 aa34.01■■■■□ 3.03
MSGN1-201ENST00000281047 ARAP1Q96P48 1450 aa33.96■■■■□ 3.03
MSGN1-201ENST00000281047 ADAMTS12P58397 1594 aa33.92■■■■□ 3.02
MSGN1-201ENST00000281047 ERICH3Q5RHP9 1530 aa33.89■■■■□ 3.02
MSGN1-201ENST00000281047 GRIN2AQ12879 1464 aa33.89■■■■□ 3.02
MSGN1-201ENST00000281047 FHAD1B1AJZ9 1412 aa33.87■■■■□ 3.01
MSGN1-201ENST00000281047 NUP160Q12769 1436 aa33.76■■■□□ 2.99
MSGN1-201ENST00000281047 CEP170Q5SW79 1584 aa33.72■■■□□ 2.99
MSGN1-201ENST00000281047 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
MSGN1-201ENST00000281047 SHROOM2Q13796 1616 aa33.55■■■□□ 2.96
MSGN1-201ENST00000281047 TRHP20396 242 aaPredicted RBP33.53■■■□□ 2.96
MSGN1-201ENST00000281047 IGF1RP08069 1367 aa33.52■■■□□ 2.96
MSGN1-201ENST00000281047 ERCC6L2Q5T890 1561 aa33.51■■■□□ 2.96
MSGN1-201ENST00000281047 CUL7Q14999 1698 aa33.47■■■□□ 2.95
MSGN1-201ENST00000281047 RUSC2Q8N2Y8 1516 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 1490.9 ms