RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 NISCHQ9Y2I1 1504 aa48.08■■■■■ 5.29
CBLN3-202ENST00000555436 CCDC180Q9P1Z9 1646 aa42.9■■■■■ 4.46
CBLN3-202ENST00000555436 ABCC9O60706 1549 aa42.51■■■■■ 4.4
CBLN3-202ENST00000555436 RB1CC1Q8TDY2 1594 aa40.66■■■■■ 4.1
CBLN3-202ENST00000555436 NACADO15069 1562 aa40.51■■■■■ 4.08
CBLN3-202ENST00000555436 DCAF8L2P0C7V8 631 aa40.39■■■■■ 4.06
CBLN3-202ENST00000555436 MYO15BQ96JP2 1530 aa40.14■■■■■ 4.02
CBLN3-202ENST00000555436 ZCCHC6Q5VYS8 1495 aaKnown RBP39.95■■■■□ 3.99
CBLN3-202ENST00000555436 DCAF1Q9Y4B6 1507 aa39.77■■■■□ 3.96
CBLN3-202ENST00000555436 PABPN1Q86U42 306 aaKnown RBP eCLIP39.68■■■■□ 3.94
CBLN3-202ENST00000555436 UNC13AQ9UPW8 1703 aa39.62■■■■□ 3.93
CBLN3-202ENST00000555436 DNAJC5BQ9UF47 199 aa39.52■■■■□ 3.92
CBLN3-202ENST00000555436 BICRAQ9NZM4 1560 aa39.45■■■■□ 3.91
CBLN3-202ENST00000555436 SCRIBQ14160 1630 aa39.12■■■■□ 3.85
CBLN3-202ENST00000555436 SHROOM4Q9ULL8 1493 aa39.04■■■■□ 3.84
CBLN3-202ENST00000555436 EIF4G1Q04637 1599 aaKnown RBP38.45■■■■□ 3.75
CBLN3-202ENST00000555436 CC2D2AQ9P2K1 1620 aa38.41■■■■□ 3.74
CBLN3-202ENST00000555436 CECR2Q9BXF3 1484 aa38.28■■■■□ 3.72
CBLN3-202ENST00000555436 NCAPD3P42695 1498 aa37.43■■■■□ 3.58
CBLN3-202ENST00000555436 SMARCA4P51532 1647 aa37.38■■■■□ 3.57
CBLN3-202ENST00000555436 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
CBLN3-202ENST00000555436 BAZ1AQ9NRL2 1556 aaPredicted RBP37.29■■■■□ 3.56
CBLN3-202ENST00000555436 SMARCA2P51531 1590 aa37.26■■■■□ 3.56
CBLN3-202ENST00000555436 HMGXB3Q12766 1538 aa37.15■■■■□ 3.54
CBLN3-202ENST00000555436 PEG3Q9GZU2 1588 aa37.05■■■■□ 3.52
CBLN3-202ENST00000555436 MROH2BQ7Z745 1585 aa37.04■■■■□ 3.52
CBLN3-202ENST00000555436 BAZ1BQ9UIG0 1483 aaKnown RBP37.01■■■■□ 3.51
CBLN3-202ENST00000555436 ERCC6Q03468 1493 aa36.69■■■■□ 3.46
CBLN3-202ENST00000555436 NESP48681 1621 aa36.64■■■■□ 3.46
CBLN3-202ENST00000555436 WIZO95785 1651 aa36.57■■■■□ 3.44
CBLN3-202ENST00000555436 CUX2O14529 1486 aa36.5■■■■□ 3.43
CBLN3-202ENST00000555436 RSF1Q96T23 1441 aaPredicted RBP36.47■■■■□ 3.43
CBLN3-202ENST00000555436 LAMC3Q9Y6N6 1575 aa36.46■■■■□ 3.43
CBLN3-202ENST00000555436 CADPSQ9ULU8 1353 aa36.31■■■■□ 3.4
CBLN3-202ENST00000555436 PDS5BQ9NTI5 1447 aa36.28■■■■□ 3.4
CBLN3-202ENST00000555436 TOP2AP11388 1531 aaKnown RBP36.19■■■■□ 3.38
CBLN3-202ENST00000555436 THOC2Q8NI27 1593 aaKnown RBP36.16■■■■□ 3.38
CBLN3-202ENST00000555436 KIF21AQ7Z4S6 1674 aa36.11■■■■□ 3.37
CBLN3-202ENST00000555436 DNAJC5Q9H3Z4 198 aa36■■■■□ 3.35
CBLN3-202ENST00000555436 CFTRP13569 1480 aa35.99■■■■□ 3.35
CBLN3-202ENST00000555436 MRC2Q9UBG0 1479 aa35.92■■■■□ 3.34
CBLN3-202ENST00000555436 FANCD2Q9BXW9 1451 aa35.87■■■■□ 3.33
CBLN3-202ENST00000555436 CEP164Q9UPV0 1460 aa35.86■■■■□ 3.33
CBLN3-202ENST00000555436 WDR62O43379 1518 aa35.81■■■■□ 3.32
CBLN3-202ENST00000555436 CCDC88BA6NC98 1476 aa35.79■■■■□ 3.32
CBLN3-202ENST00000555436 URB2Q14146 1524 aaKnown RBP35.54■■■■□ 3.28
CBLN3-202ENST00000555436 PRDM2Q13029 1718 aa35.51■■■■□ 3.27
CBLN3-202ENST00000555436 TOPBP1Q92547 1522 aa35.23■■■■□ 3.23
CBLN3-202ENST00000555436 ABCC8Q09428 1581 aa35.21■■■■□ 3.23
CBLN3-202ENST00000555436 SUPT5HO00267 1087 aaKnown RBP35.16■■■■□ 3.22
CBLN3-202ENST00000555436 IFT140Q96RY7 1462 aa35.15■■■■□ 3.22
CBLN3-202ENST00000555436 DNMBPQ6XZF7 1577 aa35.13■■■■□ 3.21
CBLN3-202ENST00000555436 ZNF608Q9ULD9 1512 aaPredicted RBP35.02■■■■□ 3.2
CBLN3-202ENST00000555436 OSCARQ8IYS5 282 aa34.92■■■■□ 3.18
CBLN3-202ENST00000555436 POLA1P09884 1462 aaPredicted RBP34.91■■■■□ 3.18
CBLN3-202ENST00000555436 TARBP1Q13395 1621 aaKnown RBP34.86■■■■□ 3.17
CBLN3-202ENST00000555436 EIF4G3O43432 1585 aaKnown RBP34.82■■■■□ 3.16
CBLN3-202ENST00000555436 CUX1P39880 1505 aa34.78■■■■□ 3.16
CBLN3-202ENST00000555436 AQRO60306 1485 aaKnown RBP eCLIP34.78■■■■□ 3.16
CBLN3-202ENST00000555436 SOGA1O94964 1423 aa34.77■■■■□ 3.16
CBLN3-202ENST00000555436 RAD54L2Q9Y4B4 1467 aa34.76■■■■□ 3.15
CBLN3-202ENST00000555436 FGD5Q6ZNL6 1462 aa34.74■■■■□ 3.15
CBLN3-202ENST00000555436 TDRD9Q8NDG6 1382 aaKnown RBP34.64■■■■□ 3.14
CBLN3-202ENST00000555436 WDR97A6NE52 1622 aa34.56■■■■□ 3.12
CBLN3-202ENST00000555436 TRIM41Q8WV44 630 aa34.56■■■■□ 3.12
CBLN3-202ENST00000555436 FBLN2P98095 1184 aa34.46■■■■□ 3.11
CBLN3-202ENST00000555436 CHD1O14646 1710 aa34.42■■■■□ 3.1
CBLN3-202ENST00000555436 GRIN2BQ13224 1484 aa34.42■■■■□ 3.1
CBLN3-202ENST00000555436 SNAPC4Q5SXM2 1469 aa34.42■■■■□ 3.1
CBLN3-202ENST00000555436 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
CBLN3-202ENST00000555436 WRNQ14191 1432 aaPredicted RBP eCLIP34.39■■■■□ 3.1
CBLN3-202ENST00000555436 MAGI1Q96QZ7 1491 aaPredicted RBP34.38■■■■□ 3.09
CBLN3-202ENST00000555436 GAPVD1Q14C86 1478 aa34.35■■■■□ 3.09
CBLN3-202ENST00000555436 RIMBP3CA6NJZ7 1639 aa34.33■■■■□ 3.09
CBLN3-202ENST00000555436 RIMBP3BA6NNM3 1639 aa34.33■■■■□ 3.09
CBLN3-202ENST00000555436 TOP2BQ02880 1626 aa34.33■■■■□ 3.09
CBLN3-202ENST00000555436 RIMBP3Q9UFD9 1639 aa34.33■■■■□ 3.09
CBLN3-202ENST00000555436 ARHGEF11O15085 1522 aa34.32■■■■□ 3.08
CBLN3-202ENST00000555436 BIVM-ERCC5R4GMW8 1640 aa34.3■■■■□ 3.08
CBLN3-202ENST00000555436 CHMP7Q8WUX9 453 aaPredicted RBP34.3■■■■□ 3.08
CBLN3-202ENST00000555436 SYNJ1O43426 1573 aa34.29■■■■□ 3.08
CBLN3-202ENST00000555436 SYNJ2O15056 1496 aa34.26■■■■□ 3.07
CBLN3-202ENST00000555436 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
CBLN3-202ENST00000555436 PBRM1Q86U86 1689 aa34.2■■■■□ 3.07
CBLN3-202ENST00000555436 CLASP1Q7Z460 1538 aa34.12■■■■□ 3.05
CBLN3-202ENST00000555436 CYB5RLQ6IPT4 315 aa34.06■■■■□ 3.04
CBLN3-202ENST00000555436 ARAP1Q96P48 1450 aa34.01■■■■□ 3.04
CBLN3-202ENST00000555436 ADAMTS12P58397 1594 aa33.98■■■■□ 3.03
CBLN3-202ENST00000555436 GRIN2AQ12879 1464 aa33.96■■■■□ 3.03
CBLN3-202ENST00000555436 ERICH3Q5RHP9 1530 aa33.96■■■■□ 3.03
CBLN3-202ENST00000555436 FHAD1B1AJZ9 1412 aa33.95■■■■□ 3.02
CBLN3-202ENST00000555436 NUP160Q12769 1436 aa33.86■■■■□ 3.01
CBLN3-202ENST00000555436 CEP170Q5SW79 1584 aa33.79■■■■□ 3
CBLN3-202ENST00000555436 KIF27Q86VH2 1401 aa33.71■■■□□ 2.99
CBLN3-202ENST00000555436 IGF1RP08069 1367 aa33.67■■■□□ 2.98
CBLN3-202ENST00000555436 SHROOM2Q13796 1616 aa33.61■■■□□ 2.97
CBLN3-202ENST00000555436 ERCC6L2Q5T890 1561 aa33.6■■■□□ 2.97
CBLN3-202ENST00000555436 TRHP20396 242 aaPredicted RBP33.52■■■□□ 2.96
CBLN3-202ENST00000555436 JPH4Q96JJ6 628 aa33.52■■■□□ 2.96
CBLN3-202ENST00000555436 CUL7Q14999 1698 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms