RNA–Protein interactions for RNA: ENST00000523698.5

CNOT8-224, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 2 BASIC

Gene CNOT8, Length 862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-224ENST00000523698 NISCHQ9Y2I1 1504 aa48.51■■■■■ 5.36
CNOT8-224ENST00000523698 CCDC180Q9P1Z9 1646 aa43.38■■■■■ 4.54
CNOT8-224ENST00000523698 ABCC9O60706 1549 aa42.71■■■■■ 4.43
CNOT8-224ENST00000523698 RB1CC1Q8TDY2 1594 aa40.91■■■■■ 4.14
CNOT8-224ENST00000523698 NACADO15069 1562 aa40.77■■■■■ 4.12
CNOT8-224ENST00000523698 DCAF8L2P0C7V8 631 aa40.53■■■■■ 4.08
CNOT8-224ENST00000523698 ZCCHC6Q5VYS8 1495 aaKnown RBP40.38■■■■■ 4.05
CNOT8-224ENST00000523698 MYO15BQ96JP2 1530 aa40.37■■■■■ 4.05
CNOT8-224ENST00000523698 UNC13AQ9UPW8 1703 aa40.25■■■■■ 4.03
CNOT8-224ENST00000523698 DCAF1Q9Y4B6 1507 aa40.09■■■■■ 4.01
CNOT8-224ENST00000523698 BICRAQ9NZM4 1560 aa39.79■■■■□ 3.96
CNOT8-224ENST00000523698 PABPN1Q86U42 306 aaKnown RBP eCLIP39.77■■■■□ 3.96
CNOT8-224ENST00000523698 SCRIBQ14160 1630 aa39.57■■■■□ 3.92
CNOT8-224ENST00000523698 DNAJC5BQ9UF47 199 aa39.47■■■■□ 3.91
CNOT8-224ENST00000523698 SHROOM4Q9ULL8 1493 aa39.18■■■■□ 3.86
CNOT8-224ENST00000523698 EIF4G1Q04637 1599 aaKnown RBP38.72■■■■□ 3.79
CNOT8-224ENST00000523698 CC2D2AQ9P2K1 1620 aa38.67■■■■□ 3.78
CNOT8-224ENST00000523698 CECR2Q9BXF3 1484 aa38.38■■■■□ 3.73
CNOT8-224ENST00000523698 SMARCA4P51532 1647 aa37.79■■■■□ 3.64
CNOT8-224ENST00000523698 BAZ1AQ9NRL2 1556 aaPredicted RBP37.62■■■■□ 3.61
CNOT8-224ENST00000523698 ATAD2BQ9ULI0 1458 aa37.58■■■■□ 3.61
CNOT8-224ENST00000523698 NCAPD3P42695 1498 aa37.57■■■■□ 3.6
CNOT8-224ENST00000523698 SMARCA2P51531 1590 aa37.53■■■■□ 3.6
CNOT8-224ENST00000523698 HMGXB3Q12766 1538 aa37.44■■■■□ 3.58
CNOT8-224ENST00000523698 MROH2BQ7Z745 1585 aa37.42■■■■□ 3.58
CNOT8-224ENST00000523698 PEG3Q9GZU2 1588 aa37.38■■■■□ 3.58
CNOT8-224ENST00000523698 BAZ1BQ9UIG0 1483 aaKnown RBP37.26■■■■□ 3.56
CNOT8-224ENST00000523698 WIZO95785 1651 aa37.07■■■■□ 3.52
CNOT8-224ENST00000523698 NESP48681 1621 aa36.89■■■■□ 3.5
CNOT8-224ENST00000523698 RSF1Q96T23 1441 aaPredicted RBP36.8■■■■□ 3.48
CNOT8-224ENST00000523698 ERCC6Q03468 1493 aa36.79■■■■□ 3.48
CNOT8-224ENST00000523698 LAMC3Q9Y6N6 1575 aa36.71■■■■□ 3.47
CNOT8-224ENST00000523698 TOP2AP11388 1531 aaKnown RBP36.59■■■■□ 3.45
CNOT8-224ENST00000523698 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
CNOT8-224ENST00000523698 CUX2O14529 1486 aa36.53■■■■□ 3.44
CNOT8-224ENST00000523698 THOC2Q8NI27 1593 aaKnown RBP36.49■■■■□ 3.43
CNOT8-224ENST00000523698 CADPSQ9ULU8 1353 aa36.43■■■■□ 3.42
CNOT8-224ENST00000523698 PDS5BQ9NTI5 1447 aa36.36■■■■□ 3.41
CNOT8-224ENST00000523698 CFTRP13569 1480 aa36.19■■■■□ 3.38
CNOT8-224ENST00000523698 PRDM2Q13029 1718 aa36.15■■■■□ 3.38
CNOT8-224ENST00000523698 CCDC88BA6NC98 1476 aa36.11■■■■□ 3.37
CNOT8-224ENST00000523698 MRC2Q9UBG0 1479 aa36.11■■■■□ 3.37
CNOT8-224ENST00000523698 FANCD2Q9BXW9 1451 aa36.09■■■■□ 3.37
CNOT8-224ENST00000523698 CEP164Q9UPV0 1460 aa36.08■■■■□ 3.37
CNOT8-224ENST00000523698 WDR62O43379 1518 aa36.04■■■■□ 3.36
CNOT8-224ENST00000523698 URB2Q14146 1524 aaKnown RBP35.8■■■■□ 3.32
CNOT8-224ENST00000523698 DNAJC5Q9H3Z4 198 aa35.73■■■■□ 3.31
CNOT8-224ENST00000523698 SUPT5HO00267 1087 aaKnown RBP35.54■■■■□ 3.28
CNOT8-224ENST00000523698 TOPBP1Q92547 1522 aa35.51■■■■□ 3.27
CNOT8-224ENST00000523698 DNMBPQ6XZF7 1577 aa35.45■■■■□ 3.27
CNOT8-224ENST00000523698 ABCC8Q09428 1581 aa35.37■■■■□ 3.25
CNOT8-224ENST00000523698 IFT140Q96RY7 1462 aa35.3■■■■□ 3.24
CNOT8-224ENST00000523698 ZNF608Q9ULD9 1512 aaPredicted RBP35.26■■■■□ 3.23
CNOT8-224ENST00000523698 TARBP1Q13395 1621 aaKnown RBP35.2■■■■□ 3.23
CNOT8-224ENST00000523698 POLA1P09884 1462 aaPredicted RBP35.17■■■■□ 3.22
CNOT8-224ENST00000523698 EIF4G3O43432 1585 aaKnown RBP35.17■■■■□ 3.22
CNOT8-224ENST00000523698 CUX1P39880 1505 aa35.14■■■■□ 3.22
CNOT8-224ENST00000523698 FGD5Q6ZNL6 1462 aa35.04■■■■□ 3.2
CNOT8-224ENST00000523698 RAD54L2Q9Y4B4 1467 aa35.03■■■■□ 3.2
CNOT8-224ENST00000523698 AQRO60306 1485 aaKnown RBP eCLIP34.96■■■■□ 3.194e-10■■■■■ 49.3
CNOT8-224ENST00000523698 SOGA1O94964 1423 aa34.93■■■■□ 3.18
CNOT8-224ENST00000523698 WDR97A6NE52 1622 aa34.92■■■■□ 3.18
CNOT8-224ENST00000523698 CHD1O14646 1710 aa34.86■■■■□ 3.17
CNOT8-224ENST00000523698 OSCARQ8IYS5 282 aa34.83■■■■□ 3.17
CNOT8-224ENST00000523698 TDRD9Q8NDG6 1382 aaKnown RBP34.81■■■■□ 3.16
CNOT8-224ENST00000523698 BIVM-ERCC5R4GMW8 1640 aa34.8■■■■□ 3.16
CNOT8-224ENST00000523698 SYNJ1O43426 1573 aa34.76■■■■□ 3.16
CNOT8-224ENST00000523698 TOP2BQ02880 1626 aa34.73■■■■□ 3.15
CNOT8-224ENST00000523698 PBRM1Q86U86 1689 aa34.72■■■■□ 3.15
CNOT8-224ENST00000523698 WRNQ14191 1432 aaPredicted RBP eCLIP34.69■■■■□ 3.14
CNOT8-224ENST00000523698 ABCA10Q8WWZ4 1543 aa34.66■■■■□ 3.14
CNOT8-224ENST00000523698 SNAPC4Q5SXM2 1469 aa34.66■■■■□ 3.14
CNOT8-224ENST00000523698 ABCA5Q8WWZ7 1642 aa34.65■■■■□ 3.14
CNOT8-224ENST00000523698 GRIN2BQ13224 1484 aa34.6■■■■□ 3.13
CNOT8-224ENST00000523698 GAPVD1Q14C86 1478 aa34.58■■■■□ 3.13
CNOT8-224ENST00000523698 MAGI1Q96QZ7 1491 aaPredicted RBP34.56■■■■□ 3.12
CNOT8-224ENST00000523698 RIMBP3CA6NJZ7 1639 aa34.55■■■■□ 3.12
CNOT8-224ENST00000523698 RIMBP3BA6NNM3 1639 aa34.55■■■■□ 3.12
CNOT8-224ENST00000523698 RIMBP3Q9UFD9 1639 aa34.55■■■■□ 3.12
CNOT8-224ENST00000523698 FBLN2P98095 1184 aa34.51■■■■□ 3.12
CNOT8-224ENST00000523698 TRIM41Q8WV44 630 aa34.45■■■■□ 3.11
CNOT8-224ENST00000523698 ARHGEF11O15085 1522 aa34.45■■■■□ 3.1
CNOT8-224ENST00000523698 SYNJ2O15056 1496 aa34.43■■■■□ 3.1
CNOT8-224ENST00000523698 CLASP1Q7Z460 1538 aa34.37■■■■□ 3.09
CNOT8-224ENST00000523698 ADAMTS12P58397 1594 aa34.34■■■■□ 3.09
CNOT8-224ENST00000523698 CHMP7Q8WUX9 453 aaPredicted RBP34.34■■■■□ 3.09
CNOT8-224ENST00000523698 ERICH3Q5RHP9 1530 aa34.24■■■■□ 3.07
CNOT8-224ENST00000523698 GRIN2AQ12879 1464 aa34.2■■■■□ 3.06
CNOT8-224ENST00000523698 ARAP1Q96P48 1450 aa34.16■■■■□ 3.06
CNOT8-224ENST00000523698 FHAD1B1AJZ9 1412 aa34.13■■■■□ 3.05
CNOT8-224ENST00000523698 CEP170Q5SW79 1584 aa34.12■■■■□ 3.05
CNOT8-224ENST00000523698 NUP160Q12769 1436 aa34.05■■■■□ 3.04
CNOT8-224ENST00000523698 CYB5RLQ6IPT4 315 aa34.01■■■■□ 3.03
CNOT8-224ENST00000523698 KIF27Q86VH2 1401 aa33.96■■■■□ 3.03
CNOT8-224ENST00000523698 CUL7Q14999 1698 aa33.93■■■■□ 3.02
CNOT8-224ENST00000523698 SHROOM2Q13796 1616 aa33.92■■■■□ 3.02
CNOT8-224ENST00000523698 ERCC6L2Q5T890 1561 aa33.91■■■■□ 3.02
CNOT8-224ENST00000523698 IGF1RP08069 1367 aa33.86■■■■□ 3.01
CNOT8-224ENST00000523698 RUSC2Q8N2Y8 1516 aa33.85■■■■□ 3.01
CNOT8-224ENST00000523698 CARMIL1Q5VZK9 1371 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms