RNA–Protein interactions for RNA: ENST00000428381.6

BACE1-203, Transcript of beta-secretase 1, humanhuman

TSL 1 (best) BASIC

Gene BACE1, Length 1,333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1-203ENST00000428381 NISCHQ9Y2I1 1504 aa48.02■■■■■ 5.28
BACE1-203ENST00000428381 CCDC180Q9P1Z9 1646 aa42.82■■■■■ 4.44
BACE1-203ENST00000428381 ABCC9O60706 1549 aa42.75■■■■■ 4.43
BACE1-203ENST00000428381 RB1CC1Q8TDY2 1594 aa40.69■■■■■ 4.1
BACE1-203ENST00000428381 DCAF8L2P0C7V8 631 aa40.43■■■■■ 4.06
BACE1-203ENST00000428381 NACADO15069 1562 aa40.41■■■■■ 4.06
BACE1-203ENST00000428381 MYO15BQ96JP2 1530 aa40.04■■■■■ 4
BACE1-203ENST00000428381 ZCCHC6Q5VYS8 1495 aaKnown RBP40.01■■■■■ 4
BACE1-203ENST00000428381 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
BACE1-203ENST00000428381 PABPN1Q86U42 306 aaKnown RBP eCLIP39.86■■■■□ 3.97
BACE1-203ENST00000428381 DCAF1Q9Y4B6 1507 aa39.83■■■■□ 3.97
BACE1-203ENST00000428381 UNC13AQ9UPW8 1703 aa39.81■■■■□ 3.96
BACE1-203ENST00000428381 BICRAQ9NZM4 1560 aa39.49■■■■□ 3.91
BACE1-203ENST00000428381 SCRIBQ14160 1630 aa39.12■■■■□ 3.85
BACE1-203ENST00000428381 SHROOM4Q9ULL8 1493 aa38.87■■■■□ 3.81
BACE1-203ENST00000428381 CC2D2AQ9P2K1 1620 aa38.59■■■■□ 3.77
BACE1-203ENST00000428381 EIF4G1Q04637 1599 aaKnown RBP38.52■■■■□ 3.76
BACE1-203ENST00000428381 CECR2Q9BXF3 1484 aa38.45■■■■□ 3.74
BACE1-203ENST00000428381 NCAPD3P42695 1498 aa37.29■■■■□ 3.56
BACE1-203ENST00000428381 SMARCA4P51532 1647 aa37.28■■■■□ 3.56
BACE1-203ENST00000428381 ATAD2BQ9ULI0 1458 aa37.24■■■■□ 3.55
BACE1-203ENST00000428381 BAZ1AQ9NRL2 1556 aaPredicted RBP37.24■■■■□ 3.55
BACE1-203ENST00000428381 SMARCA2P51531 1590 aa37.13■■■■□ 3.54
BACE1-203ENST00000428381 HMGXB3Q12766 1538 aa37.04■■■■□ 3.52
BACE1-203ENST00000428381 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
BACE1-203ENST00000428381 MROH2BQ7Z745 1585 aa36.96■■■■□ 3.51
BACE1-203ENST00000428381 BAZ1BQ9UIG0 1483 aaKnown RBP36.92■■■■□ 3.5
BACE1-203ENST00000428381 ERCC6Q03468 1493 aa36.9■■■■□ 3.5
BACE1-203ENST00000428381 NESP48681 1621 aa36.76■■■■□ 3.48
BACE1-203ENST00000428381 CUX2O14529 1486 aa36.68■■■■□ 3.46
BACE1-203ENST00000428381 WIZO95785 1651 aa36.59■■■■□ 3.45
BACE1-203ENST00000428381 RSF1Q96T23 1441 aaPredicted RBP36.52■■■■□ 3.44
BACE1-203ENST00000428381 DNAJC5Q9H3Z4 198 aa36.5■■■■□ 3.43
BACE1-203ENST00000428381 LAMC3Q9Y6N6 1575 aa36.46■■■■□ 3.43
BACE1-203ENST00000428381 THOC2Q8NI27 1593 aaKnown RBP36.31■■■■□ 3.4
BACE1-203ENST00000428381 KIF21AQ7Z4S6 1674 aa36.29■■■■□ 3.4
BACE1-203ENST00000428381 PDS5BQ9NTI5 1447 aa36.26■■■■□ 3.39
BACE1-203ENST00000428381 TOP2AP11388 1531 aaKnown RBP36.22■■■■□ 3.39
BACE1-203ENST00000428381 CADPSQ9ULU8 1353 aa36.2■■■■□ 3.39
BACE1-203ENST00000428381 MRC2Q9UBG0 1479 aa35.94■■■■□ 3.34
BACE1-203ENST00000428381 CEP164Q9UPV0 1460 aa35.85■■■■□ 3.33
BACE1-203ENST00000428381 WDR62O43379 1518 aa35.83■■■■□ 3.33
BACE1-203ENST00000428381 FANCD2Q9BXW9 1451 aa35.83■■■■□ 3.33
BACE1-203ENST00000428381 CFTRP13569 1480 aa35.81■■■■□ 3.32
BACE1-203ENST00000428381 CCDC88BA6NC98 1476 aa35.74■■■■□ 3.31
BACE1-203ENST00000428381 PRDM2Q13029 1718 aa35.62■■■■□ 3.29
BACE1-203ENST00000428381 URB2Q14146 1524 aaKnown RBP35.52■■■■□ 3.28
BACE1-203ENST00000428381 SUPT5HO00267 1087 aaKnown RBP35.37■■■■□ 3.25
BACE1-203ENST00000428381 TOPBP1Q92547 1522 aa35.16■■■■□ 3.22
BACE1-203ENST00000428381 TRIM41Q8WV44 630 aa35.11■■■■□ 3.21
BACE1-203ENST00000428381 IFT140Q96RY7 1462 aa35.1■■■■□ 3.21
BACE1-203ENST00000428381 OSCARQ8IYS5 282 aa35.08■■■■□ 3.21
BACE1-203ENST00000428381 ZNF608Q9ULD9 1512 aaPredicted RBP35.08■■■■□ 3.21
BACE1-203ENST00000428381 ABCC8Q09428 1581 aa35.04■■■■□ 3.2
BACE1-203ENST00000428381 DNMBPQ6XZF7 1577 aa35.03■■■■□ 3.2
BACE1-203ENST00000428381 EIF4G3O43432 1585 aaKnown RBP34.89■■■■□ 3.18
BACE1-203ENST00000428381 TARBP1Q13395 1621 aaKnown RBP34.82■■■■□ 3.16
BACE1-203ENST00000428381 POLA1P09884 1462 aaPredicted RBP34.81■■■■□ 3.16
BACE1-203ENST00000428381 AQRO60306 1485 aaKnown RBP eCLIP34.79■■■■□ 3.16
BACE1-203ENST00000428381 RAD54L2Q9Y4B4 1467 aa34.72■■■■□ 3.15
BACE1-203ENST00000428381 CUX1P39880 1505 aa34.68■■■■□ 3.14
BACE1-203ENST00000428381 SOGA1O94964 1423 aa34.67■■■■□ 3.14
BACE1-203ENST00000428381 FGD5Q6ZNL6 1462 aa34.64■■■■□ 3.14
BACE1-203ENST00000428381 RIMBP3CA6NJZ7 1639 aa34.63■■■■□ 3.13
BACE1-203ENST00000428381 RIMBP3BA6NNM3 1639 aa34.63■■■■□ 3.13
BACE1-203ENST00000428381 RIMBP3Q9UFD9 1639 aa34.63■■■■□ 3.13
BACE1-203ENST00000428381 CHD1O14646 1710 aa34.62■■■■□ 3.13
BACE1-203ENST00000428381 FBLN2P98095 1184 aa34.6■■■■□ 3.13
BACE1-203ENST00000428381 TDRD9Q8NDG6 1382 aaKnown RBP34.6■■■■□ 3.13
BACE1-203ENST00000428381 ARHGEF11O15085 1522 aa34.52■■■■□ 3.12
BACE1-203ENST00000428381 BIVM-ERCC5R4GMW8 1640 aa34.47■■■■□ 3.11
BACE1-203ENST00000428381 WDR97A6NE52 1622 aa34.45■■■■□ 3.11
BACE1-203ENST00000428381 SNAPC4Q5SXM2 1469 aa34.44■■■■□ 3.1
BACE1-203ENST00000428381 TOP2BQ02880 1626 aa34.44■■■■□ 3.1
BACE1-203ENST00000428381 WRNQ14191 1432 aaPredicted RBP eCLIP34.42■■■■□ 3.1
BACE1-203ENST00000428381 SYNJ1O43426 1573 aa34.37■■■■□ 3.09
BACE1-203ENST00000428381 GRIN2BQ13224 1484 aa34.33■■■■□ 3.09
BACE1-203ENST00000428381 CYB5RLQ6IPT4 315 aa34.31■■■■□ 3.08
BACE1-203ENST00000428381 CHMP7Q8WUX9 453 aaPredicted RBP34.31■■■■□ 3.08
BACE1-203ENST00000428381 MAGI1Q96QZ7 1491 aaPredicted RBP34.29■■■■□ 3.08
BACE1-203ENST00000428381 ABCA10Q8WWZ4 1543 aa34.27■■■■□ 3.08
BACE1-203ENST00000428381 PBRM1Q86U86 1689 aa34.25■■■■□ 3.07
BACE1-203ENST00000428381 GAPVD1Q14C86 1478 aa34.24■■■■□ 3.07
BACE1-203ENST00000428381 SYNJ2O15056 1496 aa34.19■■■■□ 3.06
BACE1-203ENST00000428381 ARAP1Q96P48 1450 aa34.19■■■■□ 3.06
BACE1-203ENST00000428381 ABCA5Q8WWZ7 1642 aa34.17■■■■□ 3.06
BACE1-203ENST00000428381 CLASP1Q7Z460 1538 aa34.16■■■■□ 3.06
BACE1-203ENST00000428381 TRHP20396 242 aaPredicted RBP33.92■■■■□ 3.02
BACE1-203ENST00000428381 ADAMTS12P58397 1594 aa33.9■■■■□ 3.02
BACE1-203ENST00000428381 GRIN2AQ12879 1464 aa33.9■■■■□ 3.02
BACE1-203ENST00000428381 ERICH3Q5RHP9 1530 aa33.88■■■■□ 3.01
BACE1-203ENST00000428381 FHAD1B1AJZ9 1412 aa33.79■■■■□ 3
BACE1-203ENST00000428381 CEP170Q5SW79 1584 aa33.79■■■■□ 3
BACE1-203ENST00000428381 NUP160Q12769 1436 aa33.73■■■□□ 2.99
BACE1-203ENST00000428381 KIF27Q86VH2 1401 aa33.71■■■□□ 2.99
BACE1-203ENST00000428381 ERCC6L2Q5T890 1561 aa33.71■■■□□ 2.99
BACE1-203ENST00000428381 CUL7Q14999 1698 aa33.58■■■□□ 2.97
BACE1-203ENST00000428381 IGF1RP08069 1367 aa33.58■■■□□ 2.97
BACE1-203ENST00000428381 SHROOM2Q13796 1616 aa33.58■■■□□ 2.97
BACE1-203ENST00000428381 PRG4Q92954 1404 aaPredicted RBP33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms