RNA–Protein interactions for RNA: ENST00000392090.6

PDCD2-202, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-202ENST00000392090 NISCHQ9Y2I1 1504 aa47.9■■■■■ 5.26
PDCD2-202ENST00000392090 CCDC180Q9P1Z9 1646 aa42.7■■■■■ 4.43
PDCD2-202ENST00000392090 ABCC9O60706 1549 aa42.16■■■■■ 4.34
PDCD2-202ENST00000392090 RB1CC1Q8TDY2 1594 aa40.4■■■■■ 4.06
PDCD2-202ENST00000392090 DCAF8L2P0C7V8 631 aa40.32■■■■■ 4.05
PDCD2-202ENST00000392090 NACADO15069 1562 aa40.26■■■■■ 4.04
PDCD2-202ENST00000392090 MYO15BQ96JP2 1530 aa39.86■■■■□ 3.97
PDCD2-202ENST00000392090 ZCCHC6Q5VYS8 1495 aaKnown RBP39.81■■■■□ 3.96
PDCD2-202ENST00000392090 DCAF1Q9Y4B6 1507 aa39.58■■■■□ 3.93
PDCD2-202ENST00000392090 UNC13AQ9UPW8 1703 aa39.43■■■■□ 3.9
PDCD2-202ENST00000392090 PABPN1Q86U42 306 aaKnown RBP eCLIP39.38■■■■□ 3.89
PDCD2-202ENST00000392090 BICRAQ9NZM4 1560 aa39.12■■■■□ 3.85
PDCD2-202ENST00000392090 SCRIBQ14160 1630 aa39■■■■□ 3.83
PDCD2-202ENST00000392090 DNAJC5BQ9UF47 199 aa38.96■■■■□ 3.83
PDCD2-202ENST00000392090 SHROOM4Q9ULL8 1493 aa38.69■■■■□ 3.78
PDCD2-202ENST00000392090 EIF4G1Q04637 1599 aaKnown RBP38.16■■■■□ 3.7
PDCD2-202ENST00000392090 CC2D2AQ9P2K1 1620 aa38.09■■■■□ 3.69
PDCD2-202ENST00000392090 CECR2Q9BXF3 1484 aa37.91■■■■□ 3.66
PDCD2-202ENST00000392090 SMARCA4P51532 1647 aa37.24■■■■□ 3.55
PDCD2-202ENST00000392090 BAZ1AQ9NRL2 1556 aaPredicted RBP37.17■■■■□ 3.54
PDCD2-202ENST00000392090 NCAPD3P42695 1498 aa37.13■■■■□ 3.54
PDCD2-202ENST00000392090 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.53
PDCD2-202ENST00000392090 SMARCA2P51531 1590 aa37.08■■■■□ 3.53
PDCD2-202ENST00000392090 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
PDCD2-202ENST00000392090 HMGXB3Q12766 1538 aa36.91■■■■□ 3.5
PDCD2-202ENST00000392090 PEG3Q9GZU2 1588 aa36.84■■■■□ 3.49
PDCD2-202ENST00000392090 BAZ1BQ9UIG0 1483 aaKnown RBP36.83■■■■□ 3.49
PDCD2-202ENST00000392090 WIZO95785 1651 aa36.51■■■■□ 3.44
PDCD2-202ENST00000392090 ERCC6Q03468 1493 aa36.41■■■■□ 3.42
PDCD2-202ENST00000392090 RSF1Q96T23 1441 aaPredicted RBP36.39■■■■□ 3.42
PDCD2-202ENST00000392090 NESP48681 1621 aa36.37■■■■□ 3.41
PDCD2-202ENST00000392090 LAMC3Q9Y6N6 1575 aa36.22■■■■□ 3.39
PDCD2-202ENST00000392090 TOP2AP11388 1531 aaKnown RBP36.09■■■■□ 3.37
PDCD2-202ENST00000392090 CADPSQ9ULU8 1353 aa36.07■■■■□ 3.36
PDCD2-202ENST00000392090 CUX2O14529 1486 aa36.06■■■■□ 3.36
PDCD2-202ENST00000392090 PDS5BQ9NTI5 1447 aa36.03■■■■□ 3.36
PDCD2-202ENST00000392090 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
PDCD2-202ENST00000392090 THOC2Q8NI27 1593 aaKnown RBP35.85■■■■□ 3.33
PDCD2-202ENST00000392090 CFTRP13569 1480 aa35.76■■■■□ 3.32
PDCD2-202ENST00000392090 CCDC88BA6NC98 1476 aa35.69■■■■□ 3.3
PDCD2-202ENST00000392090 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
PDCD2-202ENST00000392090 MRC2Q9UBG0 1479 aa35.66■■■■□ 3.3
PDCD2-202ENST00000392090 CEP164Q9UPV0 1460 aa35.66■■■■□ 3.3
PDCD2-202ENST00000392090 WDR62O43379 1518 aa35.52■■■■□ 3.28
PDCD2-202ENST00000392090 PRDM2Q13029 1718 aa35.46■■■■□ 3.27
PDCD2-202ENST00000392090 DNAJC5Q9H3Z4 198 aa35.37■■■■□ 3.25
PDCD2-202ENST00000392090 SUPT5HO00267 1087 aaKnown RBP35.35■■■■□ 3.25
PDCD2-202ENST00000392090 URB2Q14146 1524 aaKnown RBP35.3■■■■□ 3.24
PDCD2-202ENST00000392090 TOPBP1Q92547 1522 aa35.04■■■■□ 3.2
PDCD2-202ENST00000392090 ABCC8Q09428 1581 aa35.04■■■■□ 3.2
PDCD2-202ENST00000392090 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
PDCD2-202ENST00000392090 IFT140Q96RY7 1462 aa34.9■■■■□ 3.18
PDCD2-202ENST00000392090 ZNF608Q9ULD9 1512 aaPredicted RBP34.77■■■■□ 3.16
PDCD2-202ENST00000392090 POLA1P09884 1462 aaPredicted RBP34.72■■■■□ 3.15
PDCD2-202ENST00000392090 TARBP1Q13395 1621 aaKnown RBP34.66■■■■□ 3.14
PDCD2-202ENST00000392090 CUX1P39880 1505 aa34.65■■■■□ 3.14
PDCD2-202ENST00000392090 SOGA1O94964 1423 aa34.62■■■■□ 3.13
PDCD2-202ENST00000392090 EIF4G3O43432 1585 aaKnown RBP34.61■■■■□ 3.13
PDCD2-202ENST00000392090 FGD5Q6ZNL6 1462 aa34.6■■■■□ 3.13
PDCD2-202ENST00000392090 RAD54L2Q9Y4B4 1467 aa34.59■■■■□ 3.13
PDCD2-202ENST00000392090 OSCARQ8IYS5 282 aa34.58■■■■□ 3.13
PDCD2-202ENST00000392090 AQRO60306 1485 aaKnown RBP eCLIP34.56■■■■□ 3.129e-7■■■■■ 36.8
PDCD2-202ENST00000392090 TDRD9Q8NDG6 1382 aaKnown RBP34.47■■■■□ 3.11
PDCD2-202ENST00000392090 WDR97A6NE52 1622 aa34.37■■■■□ 3.09
PDCD2-202ENST00000392090 WRNQ14191 1432 aaPredicted RBP eCLIP34.34■■■■□ 3.09
PDCD2-202ENST00000392090 FBLN2P98095 1184 aa34.3■■■■□ 3.08
PDCD2-202ENST00000392090 TOP2BQ02880 1626 aa34.26■■■■□ 3.08
PDCD2-202ENST00000392090 BIVM-ERCC5R4GMW8 1640 aa34.25■■■■□ 3.07
PDCD2-202ENST00000392090 CHD1O14646 1710 aa34.24■■■■□ 3.07
PDCD2-202ENST00000392090 SYNJ1O43426 1573 aa34.24■■■■□ 3.07
PDCD2-202ENST00000392090 GRIN2BQ13224 1484 aa34.23■■■■□ 3.07
PDCD2-202ENST00000392090 ABCA10Q8WWZ4 1543 aa34.23■■■■□ 3.07
PDCD2-202ENST00000392090 SNAPC4Q5SXM2 1469 aa34.22■■■■□ 3.07
PDCD2-202ENST00000392090 GAPVD1Q14C86 1478 aa34.2■■■■□ 3.06
PDCD2-202ENST00000392090 MAGI1Q96QZ7 1491 aaPredicted RBP34.16■■■■□ 3.06
PDCD2-202ENST00000392090 TRIM41Q8WV44 630 aa34.15■■■■□ 3.06
PDCD2-202ENST00000392090 CHMP7Q8WUX9 453 aaPredicted RBP34.13■■■■□ 3.05
PDCD2-202ENST00000392090 PBRM1Q86U86 1689 aa34.12■■■■□ 3.05
PDCD2-202ENST00000392090 ABCA5Q8WWZ7 1642 aa34.11■■■■□ 3.05
PDCD2-202ENST00000392090 SYNJ2O15056 1496 aa34.04■■■■□ 3.04
PDCD2-202ENST00000392090 RIMBP3CA6NJZ7 1639 aa34■■■■□ 3.03
PDCD2-202ENST00000392090 RIMBP3BA6NNM3 1639 aa34■■■■□ 3.03
PDCD2-202ENST00000392090 RIMBP3Q9UFD9 1639 aa34■■■■□ 3.03
PDCD2-202ENST00000392090 ARHGEF11O15085 1522 aa33.97■■■■□ 3.03
PDCD2-202ENST00000392090 CLASP1Q7Z460 1538 aa33.84■■■■□ 3.01
PDCD2-202ENST00000392090 ERICH3Q5RHP9 1530 aa33.83■■■■□ 3.01
PDCD2-202ENST00000392090 ADAMTS12P58397 1594 aa33.82■■■■□ 3
PDCD2-202ENST00000392090 FHAD1B1AJZ9 1412 aa33.79■■■■□ 3
PDCD2-202ENST00000392090 GRIN2AQ12879 1464 aa33.78■■■■□ 3
PDCD2-202ENST00000392090 CYB5RLQ6IPT4 315 aa33.75■■■□□ 2.99
PDCD2-202ENST00000392090 KIF27Q86VH2 1401 aa33.67■■■□□ 2.98
PDCD2-202ENST00000392090 ARAP1Q96P48 1450 aa33.66■■■□□ 2.98
PDCD2-202ENST00000392090 NUP160Q12769 1436 aa33.62■■■□□ 2.97
PDCD2-202ENST00000392090 CEP170Q5SW79 1584 aa33.6■■■□□ 2.97
PDCD2-202ENST00000392090 IGF1RP08069 1367 aa33.55■■■□□ 2.96
PDCD2-202ENST00000392090 CUL7Q14999 1698 aa33.46■■■□□ 2.95
PDCD2-202ENST00000392090 SHROOM2Q13796 1616 aa33.38■■■□□ 2.93
PDCD2-202ENST00000392090 CARMIL1Q5VZK9 1371 aa33.36■■■□□ 2.93
PDCD2-202ENST00000392090 ERCC6L2Q5T890 1561 aa33.36■■■□□ 2.93
PDCD2-202ENST00000392090 JPH4Q96JJ6 628 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms