RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 NISCHQ9Y2I1 1504 aa47.38■■■■■ 5.18
TRAPPC6A-201ENST00000006275 ABCC9O60706 1549 aa43.35■■■■■ 4.53
TRAPPC6A-201ENST00000006275 CCDC180Q9P1Z9 1646 aa42.71■■■■■ 4.43
TRAPPC6A-201ENST00000006275 DNAJC5BQ9UF47 199 aa41.13■■■■■ 4.17
TRAPPC6A-201ENST00000006275 RB1CC1Q8TDY2 1594 aa40.97■■■■■ 4.15
TRAPPC6A-201ENST00000006275 NACADO15069 1562 aa40.55■■■■■ 4.08
TRAPPC6A-201ENST00000006275 DCAF8L2P0C7V8 631 aa40.35■■■■■ 4.05
TRAPPC6A-201ENST00000006275 PABPN1Q86U42 306 aaKnown RBP eCLIP40.29■■■■■ 4.04
TRAPPC6A-201ENST00000006275 UNC13AQ9UPW8 1703 aa39.94■■■■□ 3.98
TRAPPC6A-201ENST00000006275 MYO15BQ96JP2 1530 aa39.79■■■■□ 3.96
TRAPPC6A-201ENST00000006275 BICRAQ9NZM4 1560 aa39.76■■■■□ 3.96
TRAPPC6A-201ENST00000006275 SHROOM4Q9ULL8 1493 aa39.2■■■■□ 3.87
TRAPPC6A-201ENST00000006275 ZCCHC6Q5VYS8 1495 aaKnown RBP39.16■■■■□ 3.86
TRAPPC6A-201ENST00000006275 CECR2Q9BXF3 1484 aa39.11■■■■□ 3.85
TRAPPC6A-201ENST00000006275 DCAF1Q9Y4B6 1507 aa39.08■■■■□ 3.85
TRAPPC6A-201ENST00000006275 CC2D2AQ9P2K1 1620 aa39.07■■■■□ 3.85
TRAPPC6A-201ENST00000006275 SCRIBQ14160 1630 aa38.95■■■■□ 3.83
TRAPPC6A-201ENST00000006275 EIF4G1Q04637 1599 aaKnown RBP38.87■■■■□ 3.81
TRAPPC6A-201ENST00000006275 DNAJC5Q9H3Z4 198 aa38.18■■■■□ 3.7
TRAPPC6A-201ENST00000006275 CUX2O14529 1486 aa37.56■■■■□ 3.6
TRAPPC6A-201ENST00000006275 ERCC6Q03468 1493 aa37.49■■■■□ 3.59
TRAPPC6A-201ENST00000006275 NCAPD3P42695 1498 aa37.45■■■■□ 3.59
TRAPPC6A-201ENST00000006275 ATAD2BQ9ULI0 1458 aa37.28■■■■□ 3.56
TRAPPC6A-201ENST00000006275 SMARCA2P51531 1590 aa37.13■■■■□ 3.53
TRAPPC6A-201ENST00000006275 HMGXB3Q12766 1538 aa37.11■■■■□ 3.53
TRAPPC6A-201ENST00000006275 SMARCA4P51532 1647 aa37.07■■■■□ 3.52
TRAPPC6A-201ENST00000006275 NESP48681 1621 aa37.06■■■■□ 3.52
TRAPPC6A-201ENST00000006275 BAZ1BQ9UIG0 1483 aaKnown RBP36.9■■■■□ 3.5
TRAPPC6A-201ENST00000006275 BAZ1AQ9NRL2 1556 aaPredicted RBP36.83■■■■□ 3.49
TRAPPC6A-201ENST00000006275 THOC2Q8NI27 1593 aaKnown RBP36.75■■■■□ 3.47
TRAPPC6A-201ENST00000006275 PEG3Q9GZU2 1588 aa36.7■■■■□ 3.46
TRAPPC6A-201ENST00000006275 LAMC3Q9Y6N6 1575 aa36.68■■■■□ 3.46
TRAPPC6A-201ENST00000006275 PDS5BQ9NTI5 1447 aa36.54■■■■□ 3.44
TRAPPC6A-201ENST00000006275 MROH2BQ7Z745 1585 aa36.51■■■■□ 3.44
TRAPPC6A-201ENST00000006275 KIF21AQ7Z4S6 1674 aa36.5■■■■□ 3.43
TRAPPC6A-201ENST00000006275 TRIM41Q8WV44 630 aa36.34■■■■□ 3.41
TRAPPC6A-201ENST00000006275 CADPSQ9ULU8 1353 aa36.32■■■■□ 3.4
TRAPPC6A-201ENST00000006275 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
TRAPPC6A-201ENST00000006275 WDR62O43379 1518 aa36.14■■■■□ 3.38
TRAPPC6A-201ENST00000006275 WIZO95785 1651 aa36.02■■■■□ 3.36
TRAPPC6A-201ENST00000006275 CEP164Q9UPV0 1460 aa35.99■■■■□ 3.35
TRAPPC6A-201ENST00000006275 FANCD2Q9BXW9 1451 aa35.91■■■■□ 3.34
TRAPPC6A-201ENST00000006275 OSCARQ8IYS5 282 aa35.79■■■■□ 3.32
TRAPPC6A-201ENST00000006275 CFTRP13569 1480 aa35.77■■■■□ 3.32
TRAPPC6A-201ENST00000006275 URB2Q14146 1524 aaKnown RBP35.63■■■■□ 3.29
TRAPPC6A-201ENST00000006275 RSF1Q96T23 1441 aaPredicted RBP35.57■■■■□ 3.28
TRAPPC6A-201ENST00000006275 TOP2AP11388 1531 aaKnown RBP35.56■■■■□ 3.28
TRAPPC6A-201ENST00000006275 RIMBP3CA6NJZ7 1639 aa35.32■■■■□ 3.25
TRAPPC6A-201ENST00000006275 RIMBP3BA6NNM3 1639 aa35.32■■■■□ 3.25
TRAPPC6A-201ENST00000006275 RIMBP3Q9UFD9 1639 aa35.32■■■■□ 3.25
TRAPPC6A-201ENST00000006275 IFT140Q96RY7 1462 aa35.3■■■■□ 3.24
TRAPPC6A-201ENST00000006275 ZNF608Q9ULD9 1512 aaPredicted RBP35.3■■■■□ 3.24
TRAPPC6A-201ENST00000006275 PRDM2Q13029 1718 aa35.26■■■■□ 3.24
TRAPPC6A-201ENST00000006275 ARHGEF11O15085 1522 aa35.19■■■■□ 3.22
TRAPPC6A-201ENST00000006275 CCDC88BA6NC98 1476 aa35.17■■■■□ 3.22
TRAPPC6A-201ENST00000006275 TOPBP1Q92547 1522 aa35.16■■■■□ 3.22
TRAPPC6A-201ENST00000006275 EIF4G3O43432 1585 aaKnown RBP35.04■■■■□ 3.2
TRAPPC6A-201ENST00000006275 ABCC8Q09428 1581 aa35.04■■■■□ 3.2
TRAPPC6A-201ENST00000006275 CYB5RLQ6IPT4 315 aa35.01■■■■□ 3.2
TRAPPC6A-201ENST00000006275 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
TRAPPC6A-201ENST00000006275 AQRO60306 1485 aaKnown RBP eCLIP34.91■■■■□ 3.188e-11■■■■■ 72.6
TRAPPC6A-201ENST00000006275 FBLN2P98095 1184 aa34.86■■■■□ 3.17
TRAPPC6A-201ENST00000006275 CHD1O14646 1710 aa34.85■■■■□ 3.17
TRAPPC6A-201ENST00000006275 TARBP1Q13395 1621 aaKnown RBP34.84■■■■□ 3.17
TRAPPC6A-201ENST00000006275 TRHP20396 242 aaPredicted RBP34.83■■■■□ 3.17
TRAPPC6A-201ENST00000006275 ARAP1Q96P48 1450 aa34.81■■■■□ 3.16
TRAPPC6A-201ENST00000006275 POLA1P09884 1462 aaPredicted RBP34.77■■■■□ 3.16
TRAPPC6A-201ENST00000006275 RAD54L2Q9Y4B4 1467 aa34.66■■■■□ 3.14
TRAPPC6A-201ENST00000006275 TDRD9Q8NDG6 1382 aaKnown RBP34.64■■■■□ 3.14
TRAPPC6A-201ENST00000006275 SOGA1O94964 1423 aa34.62■■■■□ 3.13
TRAPPC6A-201ENST00000006275 SNAPC4Q5SXM2 1469 aa34.54■■■■□ 3.12
TRAPPC6A-201ENST00000006275 CHMP7Q8WUX9 453 aaPredicted RBP34.49■■■■□ 3.11
TRAPPC6A-201ENST00000006275 FGD5Q6ZNL6 1462 aa34.47■■■■□ 3.11
TRAPPC6A-201ENST00000006275 CLASP1Q7Z460 1538 aa34.47■■■■□ 3.11
TRAPPC6A-201ENST00000006275 WDR97A6NE52 1622 aa34.44■■■■□ 3.1
TRAPPC6A-201ENST00000006275 SYNJ1O43426 1573 aa34.42■■■■□ 3.1
TRAPPC6A-201ENST00000006275 MAGI1Q96QZ7 1491 aaPredicted RBP34.41■■■■□ 3.1
TRAPPC6A-201ENST00000006275 GRIN2BQ13224 1484 aa34.37■■■■□ 3.09
TRAPPC6A-201ENST00000006275 CUX1P39880 1505 aa34.34■■■■□ 3.09
TRAPPC6A-201ENST00000006275 SYNJ2O15056 1496 aa34.32■■■■□ 3.08
TRAPPC6A-201ENST00000006275 AEBP2Q6ZN18 517 aaPredicted RBP34.23■■■■□ 3.07
TRAPPC6A-201ENST00000006275 GAPVD1Q14C86 1478 aa34.19■■■■□ 3.06
TRAPPC6A-201ENST00000006275 PBRM1Q86U86 1689 aa34.12■■■■□ 3.05
TRAPPC6A-201ENST00000006275 ABCA10Q8WWZ4 1543 aa34.04■■■■□ 3.04
TRAPPC6A-201ENST00000006275 ABCA5Q8WWZ7 1642 aa34.01■■■■□ 3.03
TRAPPC6A-201ENST00000006275 GRIN2AQ12879 1464 aa33.92■■■■□ 3.02
TRAPPC6A-201ENST00000006275 ERCC6L2Q5T890 1561 aa33.9■■■■□ 3.02
TRAPPC6A-201ENST00000006275 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
TRAPPC6A-201ENST00000006275 WRNQ14191 1432 aaPredicted RBP eCLIP33.83■■■■□ 3.01
TRAPPC6A-201ENST00000006275 NUP160Q12769 1436 aa33.82■■■■□ 3
TRAPPC6A-201ENST00000006275 ADAMTS12P58397 1594 aa33.81■■■■□ 3
TRAPPC6A-201ENST00000006275 CEP170Q5SW79 1584 aa33.81■■■■□ 3
TRAPPC6A-201ENST00000006275 FHAD1B1AJZ9 1412 aa33.73■■■□□ 2.99
TRAPPC6A-201ENST00000006275 SHROOM2Q13796 1616 aa33.68■■■□□ 2.98
TRAPPC6A-201ENST00000006275 TOP2BQ02880 1626 aa33.62■■■□□ 2.97
TRAPPC6A-201ENST00000006275 BIVM-ERCC5R4GMW8 1640 aa33.6■■■□□ 2.97
TRAPPC6A-201ENST00000006275 ERICH3Q5RHP9 1530 aa33.59■■■□□ 2.97
TRAPPC6A-201ENST00000006275 PRG4Q92954 1404 aaPredicted RBP33.57■■■□□ 2.96
TRAPPC6A-201ENST00000006275 JPH4Q96JJ6 628 aa33.51■■■□□ 2.95
TRAPPC6A-201ENST00000006275 KIF13AQ9H1H9 1805 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms