RNA–Protein interactions for RNA: ENST00000398227.7

PDE9A-209, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-209ENST00000398227 NISCHQ9Y2I1 1504 aa40.36■■■■■ 4.05
PDE9A-209ENST00000398227 CCDC180Q9P1Z9 1646 aa34.97■■■■□ 3.19
PDE9A-209ENST00000398227 ZCCHC6Q5VYS8 1495 aaKnown RBP34.01■■■■□ 3.04
PDE9A-209ENST00000398227 DCAF1Q9Y4B6 1507 aa33.42■■■□□ 2.94
PDE9A-209ENST00000398227 SHROOM4Q9ULL8 1493 aa33.28■■■□□ 2.92
PDE9A-209ENST00000398227 DCAF8L2P0C7V8 631 aa33.19■■■□□ 2.9
PDE9A-209ENST00000398227 MYO15BQ96JP2 1530 aa32.83■■■□□ 2.85
PDE9A-209ENST00000398227 ABCC9O60706 1549 aa32.54■■■□□ 2.8
PDE9A-209ENST00000398227 NACADO15069 1562 aa32.47■■■□□ 2.79
PDE9A-209ENST00000398227 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
PDE9A-209ENST00000398227 SCRIBQ14160 1630 aa32.2■■■□□ 2.75
PDE9A-209ENST00000398227 RB1CC1Q8TDY2 1594 aa32.06■■■□□ 2.72
PDE9A-209ENST00000398227 RSF1Q96T23 1441 aaPredicted RBP31.51■■■□□ 2.63
PDE9A-209ENST00000398227 UNC13AQ9UPW8 1703 aa31.33■■■□□ 2.61
PDE9A-209ENST00000398227 CECR2Q9BXF3 1484 aa31.27■■■□□ 2.6
PDE9A-209ENST00000398227 CHIC1Q5VXU3 224 aa31.24■■■□□ 2.59
PDE9A-209ENST00000398227 MROH2BQ7Z745 1585 aa31.17■■■□□ 2.58
PDE9A-209ENST00000398227 BAZ1AQ9NRL2 1556 aaPredicted RBP31.16■■■□□ 2.58
PDE9A-209ENST00000398227 BICRAQ9NZM4 1560 aa30.99■■■□□ 2.55
PDE9A-209ENST00000398227 WIZO95785 1651 aa30.94■■■□□ 2.54
PDE9A-209ENST00000398227 SMARCA4P51532 1647 aa30.92■■■□□ 2.54
PDE9A-209ENST00000398227 PABPN1Q86U42 306 aaKnown RBP eCLIP30.8■■■□□ 2.52
PDE9A-209ENST00000398227 TOP2AP11388 1531 aaKnown RBP30.69■■■□□ 2.5
PDE9A-209ENST00000398227 PEG3Q9GZU2 1588 aa30.52■■■□□ 2.48
PDE9A-209ENST00000398227 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
PDE9A-209ENST00000398227 SMARCA2P51531 1590 aa30.39■■■□□ 2.45
PDE9A-209ENST00000398227 CCDC88BA6NC98 1476 aa30.36■■■□□ 2.45
PDE9A-209ENST00000398227 EIF4G1Q04637 1599 aaKnown RBP30.32■■■□□ 2.44
PDE9A-209ENST00000398227 ATAD2BQ9ULI0 1458 aa30.28■■■□□ 2.44
PDE9A-209ENST00000398227 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
PDE9A-209ENST00000398227 LOC105371045A0A1W2PR82 267 aa30.01■■■□□ 2.39
PDE9A-209ENST00000398227 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
PDE9A-209ENST00000398227 NCAPD3P42695 1498 aa29.94■■■□□ 2.38
PDE9A-209ENST00000398227 ABCC8Q09428 1581 aa29.86■■■□□ 2.37
PDE9A-209ENST00000398227 FAM9AQ8IZU1 332 aaPredicted RBP29.8■■■□□ 2.36
PDE9A-209ENST00000398227 WRNQ14191 1432 aaPredicted RBP eCLIP29.68■■■□□ 2.34
PDE9A-209ENST00000398227 EEA1Q15075 1411 aa29.63■■■□□ 2.33
PDE9A-209ENST00000398227 SYNJ1O43426 1573 aa29.48■■■□□ 2.31
PDE9A-209ENST00000398227 CC2D2AQ9P2K1 1620 aa29.47■■■□□ 2.31
PDE9A-209ENST00000398227 SOGA1O94964 1423 aa29.43■■■□□ 2.3
PDE9A-209ENST00000398227 CFTRP13569 1480 aa29.41■■■□□ 2.3
PDE9A-209ENST00000398227 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
PDE9A-209ENST00000398227 CSRNP3Q8WYN3 585 aa29.35■■■□□ 2.29
PDE9A-209ENST00000398227 EHMT2Q96KQ7 1210 aa29.33■■■□□ 2.29
PDE9A-209ENST00000398227 BIVM-ERCC5R4GMW8 1640 aa29.32■■■□□ 2.28
PDE9A-209ENST00000398227 PRDM2Q13029 1718 aa29.32■■■□□ 2.28
PDE9A-209ENST00000398227 PCGF6Q9BYE7 350 aa29.27■■■□□ 2.28
PDE9A-209ENST00000398227 RUSC2Q8N2Y8 1516 aa29.24■■■□□ 2.27
PDE9A-209ENST00000398227 CADPSQ9ULU8 1353 aa29.23■■■□□ 2.27
PDE9A-209ENST00000398227 TNIKQ9UKE5 1360 aa29.2■■■□□ 2.27
PDE9A-209ENST00000398227 TRIM26Q12899 539 aaPredicted RBP29.2■■■□□ 2.26
PDE9A-209ENST00000398227 GOLGA3Q08378 1498 aa29.19■■■□□ 2.26
PDE9A-209ENST00000398227 KIF21BO75037 1637 aa29.14■■■□□ 2.26
PDE9A-209ENST00000398227 CEP164Q9UPV0 1460 aa29.14■■■□□ 2.26
PDE9A-209ENST00000398227 CUX1P39880 1505 aa29.12■■■□□ 2.25
PDE9A-209ENST00000398227 CEP162Q5TB80 1403 aa29.06■■■□□ 2.24
PDE9A-209ENST00000398227 UBTFP17480 764 aaKnown RBP29.04■■■□□ 2.24
PDE9A-209ENST00000398227 KIF27Q86VH2 1401 aa28.92■■■□□ 2.22
PDE9A-209ENST00000398227 HRCP23327 699 aa28.9■■■□□ 2.22
PDE9A-209ENST00000398227 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
PDE9A-209ENST00000398227 ERICH3Q5RHP9 1530 aa28.86■■■□□ 2.21
PDE9A-209ENST00000398227 LAMC3Q9Y6N6 1575 aa28.84■■■□□ 2.21
PDE9A-209ENST00000398227 RAPGEF2Q9Y4G8 1499 aa28.82■■■□□ 2.2
PDE9A-209ENST00000398227 PRXQ9BXM0 1461 aa28.81■■■□□ 2.2
PDE9A-209ENST00000398227 DNMBPQ6XZF7 1577 aa28.75■■■□□ 2.19
PDE9A-209ENST00000398227 FGD5Q6ZNL6 1462 aa28.74■■■□□ 2.19
PDE9A-209ENST00000398227 CLIP1P30622 1438 aa28.73■■■□□ 2.19
PDE9A-209ENST00000398227 NESP48681 1621 aa28.71■■■□□ 2.19
PDE9A-209ENST00000398227 CUX2O14529 1486 aa28.69■■■□□ 2.18
PDE9A-209ENST00000398227 PDS5BQ9NTI5 1447 aa28.64■■■□□ 2.18
PDE9A-209ENST00000398227 TOPBP1Q92547 1522 aa28.63■■■□□ 2.17
PDE9A-209ENST00000398227 VPS8Q8N3P4 1428 aa28.56■■■□□ 2.16
PDE9A-209ENST00000398227 IGF1RP08069 1367 aa28.55■■■□□ 2.16
PDE9A-209ENST00000398227 PPARGC1BQ86YN6 1023 aaKnown RBP28.54■■■□□ 2.16
PDE9A-209ENST00000398227 ABCA10Q8WWZ4 1543 aa28.53■■■□□ 2.16
PDE9A-209ENST00000398227 POLA1P09884 1462 aaPredicted RBP28.52■■■□□ 2.16
PDE9A-209ENST00000398227 URB2Q14146 1524 aaKnown RBP28.46■■■□□ 2.15
PDE9A-209ENST00000398227 CARMIL1Q5VZK9 1371 aa28.45■■■□□ 2.15
PDE9A-209ENST00000398227 DNAJC5BQ9UF47 199 aa28.43■■■□□ 2.14
PDE9A-209ENST00000398227 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
PDE9A-209ENST00000398227 ZEB1P37275 1124 aaPredicted RBP28.41■■■□□ 2.14
PDE9A-209ENST00000398227 APLP2Q06481 763 aa28.4■■■□□ 2.14
PDE9A-209ENST00000398227 KIF21AQ7Z4S6 1674 aa28.39■■■□□ 2.13
PDE9A-209ENST00000398227 RANGAP1P46060 587 aaPredicted RBP28.34■■■□□ 2.13
PDE9A-209ENST00000398227 WDR97A6NE52 1622 aa28.34■■■□□ 2.13
PDE9A-209ENST00000398227 CUL7Q14999 1698 aa28.33■■■□□ 2.13
PDE9A-209ENST00000398227 ARAP1Q96P48 1450 aa28.33■■■□□ 2.13
PDE9A-209ENST00000398227 TTBK1Q5TCY1 1321 aaPredicted RBP28.24■■■□□ 2.11
PDE9A-209ENST00000398227 ARHGAP35Q9NRY4 1499 aa28.23■■■□□ 2.11
PDE9A-209ENST00000398227 ABCA5Q8WWZ7 1642 aa28.22■■■□□ 2.11
PDE9A-209ENST00000398227 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
PDE9A-209ENST00000398227 GAPVD1Q14C86 1478 aa28.16■■■□□ 2.1
PDE9A-209ENST00000398227 TARBP1Q13395 1621 aaKnown RBP28.13■■■□□ 2.09
PDE9A-209ENST00000398227 TDRD9Q8NDG6 1382 aaKnown RBP28.11■■■□□ 2.09
PDE9A-209ENST00000398227 CTTNBP2Q8WZ74 1663 aa28.06■■■□□ 2.08
PDE9A-209ENST00000398227 EFCAB5A4FU69 1503 aa28.05■■■□□ 2.08
PDE9A-209ENST00000398227 FHAD1B1AJZ9 1412 aa28.02■■■□□ 2.08
PDE9A-209ENST00000398227 WDR62O43379 1518 aa28.02■■■□□ 2.08
PDE9A-209ENST00000398227 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
PDE9A-209ENST00000398227 IFT140Q96RY7 1462 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms