RNA–Protein interactions for RNA: ENST00000292566.3

ALKBH4-201, Transcript of alkB homolog 4, lysine demethylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKBH4, Length 2,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH4-201ENST00000292566 NISCHQ9Y2I1 1504 aa40.73■■■■■ 4.11
ALKBH4-201ENST00000292566 CCDC180Q9P1Z9 1646 aa35.34■■■■□ 3.25
ALKBH4-201ENST00000292566 ZCCHC6Q5VYS8 1495 aaKnown RBP34.33■■■■□ 3.09
ALKBH4-201ENST00000292566 DCAF1Q9Y4B6 1507 aa33.68■■■□□ 2.98
ALKBH4-201ENST00000292566 SHROOM4Q9ULL8 1493 aa33.61■■■□□ 2.97
ALKBH4-201ENST00000292566 DCAF8L2P0C7V8 631 aa33.47■■■□□ 2.95
ALKBH4-201ENST00000292566 MYO15BQ96JP2 1530 aa33.07■■■□□ 2.88
ALKBH4-201ENST00000292566 ABCC9O60706 1549 aa32.91■■■□□ 2.86
ALKBH4-201ENST00000292566 NACADO15069 1562 aa32.75■■■□□ 2.83
ALKBH4-201ENST00000292566 SUPT5HO00267 1087 aaKnown RBP32.58■■■□□ 2.81
ALKBH4-201ENST00000292566 SCRIBQ14160 1630 aa32.58■■■□□ 2.81
ALKBH4-201ENST00000292566 RB1CC1Q8TDY2 1594 aa32.37■■■□□ 2.77
ALKBH4-201ENST00000292566 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
ALKBH4-201ENST00000292566 RSF1Q96T23 1441 aaPredicted RBP31.78■■■□□ 2.68
ALKBH4-201ENST00000292566 CECR2Q9BXF3 1484 aa31.6■■■□□ 2.65
ALKBH4-201ENST00000292566 MROH2BQ7Z745 1585 aa31.49■■■□□ 2.63
ALKBH4-201ENST00000292566 BAZ1AQ9NRL2 1556 aaPredicted RBP31.43■■■□□ 2.62
ALKBH4-201ENST00000292566 CHIC1Q5VXU3 224 aa31.43■■■□□ 2.62
ALKBH4-201ENST00000292566 BICRAQ9NZM4 1560 aa31.36■■■□□ 2.61
ALKBH4-201ENST00000292566 WIZO95785 1651 aa31.31■■■□□ 2.6
ALKBH4-201ENST00000292566 SMARCA4P51532 1647 aa31.25■■■□□ 2.59
ALKBH4-201ENST00000292566 PABPN1Q86U42 306 aaKnown RBP eCLIP31.1■■■□□ 2.57
ALKBH4-201ENST00000292566 TOP2AP11388 1531 aaKnown RBP30.98■■■□□ 2.55
ALKBH4-201ENST00000292566 PEG3Q9GZU2 1588 aa30.81■■■□□ 2.52
ALKBH4-201ENST00000292566 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
ALKBH4-201ENST00000292566 EIF4G1Q04637 1599 aaKnown RBP30.68■■■□□ 2.5
ALKBH4-201ENST00000292566 CCDC88BA6NC98 1476 aa30.64■■■□□ 2.5
ALKBH4-201ENST00000292566 TRIM41Q8WV44 630 aa30.59■■■□□ 2.49
ALKBH4-201ENST00000292566 ATAD2BQ9ULI0 1458 aa30.55■■■□□ 2.48
ALKBH4-201ENST00000292566 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
ALKBH4-201ENST00000292566 LOC105371045A0A1W2PR82 267 aa30.25■■■□□ 2.43
ALKBH4-201ENST00000292566 HMGXB3Q12766 1538 aa30.23■■■□□ 2.43
ALKBH4-201ENST00000292566 ABCC8Q09428 1581 aa30.2■■■□□ 2.43
ALKBH4-201ENST00000292566 NCAPD3P42695 1498 aa30.18■■■□□ 2.42
ALKBH4-201ENST00000292566 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
ALKBH4-201ENST00000292566 WRNQ14191 1432 aaPredicted RBP eCLIP29.92■■■□□ 2.38
ALKBH4-201ENST00000292566 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
ALKBH4-201ENST00000292566 SYNJ1O43426 1573 aa29.8■■■□□ 2.36
ALKBH4-201ENST00000292566 EEA1Q15075 1411 aa29.78■■■□□ 2.36
ALKBH4-201ENST00000292566 SOGA1O94964 1423 aa29.7■■■□□ 2.34
ALKBH4-201ENST00000292566 PRDM2Q13029 1718 aa29.69■■■□□ 2.34
ALKBH4-201ENST00000292566 CFTRP13569 1480 aa29.67■■■□□ 2.34
ALKBH4-201ENST00000292566 TOP2BQ02880 1626 aa29.64■■■□□ 2.34
ALKBH4-201ENST00000292566 BIVM-ERCC5R4GMW8 1640 aa29.63■■■□□ 2.33
ALKBH4-201ENST00000292566 EHMT2Q96KQ7 1210 aa29.63■■■□□ 2.33
ALKBH4-201ENST00000292566 RUSC2Q8N2Y8 1516 aa29.56■■■□□ 2.32
ALKBH4-201ENST00000292566 CSRNP3Q8WYN3 585 aa29.52■■■□□ 2.32
ALKBH4-201ENST00000292566 CADPSQ9ULU8 1353 aa29.45■■■□□ 2.3
ALKBH4-201ENST00000292566 PCGF6Q9BYE7 350 aa29.44■■■□□ 2.3
ALKBH4-201ENST00000292566 CUX1P39880 1505 aa29.43■■■□□ 2.3
ALKBH4-201ENST00000292566 GOLGA3Q08378 1498 aa29.41■■■□□ 2.3
ALKBH4-201ENST00000292566 KIF21BO75037 1637 aa29.4■■■□□ 2.3
ALKBH4-201ENST00000292566 TNIKQ9UKE5 1360 aa29.38■■■□□ 2.29
ALKBH4-201ENST00000292566 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
ALKBH4-201ENST00000292566 TRIM26Q12899 539 aaPredicted RBP29.32■■■□□ 2.28
ALKBH4-201ENST00000292566 CEP162Q5TB80 1403 aa29.28■■■□□ 2.28
ALKBH4-201ENST00000292566 UBTFP17480 764 aaKnown RBP29.23■■■□□ 2.27
ALKBH4-201ENST00000292566 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
ALKBH4-201ENST00000292566 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
ALKBH4-201ENST00000292566 KIF27Q86VH2 1401 aa29.12■■■□□ 2.25
ALKBH4-201ENST00000292566 DNAJC5BQ9UF47 199 aa29.11■■■□□ 2.25
ALKBH4-201ENST00000292566 ERICH3Q5RHP9 1530 aa29.09■■■□□ 2.25
ALKBH4-201ENST00000292566 RAPGEF2Q9Y4G8 1499 aa29.09■■■□□ 2.25
ALKBH4-201ENST00000292566 NESP48681 1621 aa29.05■■■□□ 2.24
ALKBH4-201ENST00000292566 PRXQ9BXM0 1461 aa29.03■■■□□ 2.24
ALKBH4-201ENST00000292566 HRCP23327 699 aa29.03■■■□□ 2.24
ALKBH4-201ENST00000292566 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
ALKBH4-201ENST00000292566 FGD5Q6ZNL6 1462 aa29.02■■■□□ 2.24
ALKBH4-201ENST00000292566 CLIP1P30622 1438 aa28.94■■■□□ 2.22
ALKBH4-201ENST00000292566 CUX2O14529 1486 aa28.94■■■□□ 2.22
ALKBH4-201ENST00000292566 TOPBP1Q92547 1522 aa28.91■■■□□ 2.22
ALKBH4-201ENST00000292566 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
ALKBH4-201ENST00000292566 PPARGC1BQ86YN6 1023 aaKnown RBP28.81■■■□□ 2.2
ALKBH4-201ENST00000292566 POLA1P09884 1462 aaPredicted RBP28.8■■■□□ 2.2
ALKBH4-201ENST00000292566 KIF21AQ7Z4S6 1674 aa28.78■■■□□ 2.2
ALKBH4-201ENST00000292566 ABCA10Q8WWZ4 1543 aa28.77■■■□□ 2.2
ALKBH4-201ENST00000292566 IGF1RP08069 1367 aa28.76■■■□□ 2.2
ALKBH4-201ENST00000292566 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.2
ALKBH4-201ENST00000292566 VPS8Q8N3P4 1428 aa28.76■■■□□ 2.19
ALKBH4-201ENST00000292566 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
ALKBH4-201ENST00000292566 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
ALKBH4-201ENST00000292566 CARMIL1Q5VZK9 1371 aa28.65■■■□□ 2.18
ALKBH4-201ENST00000292566 CUL7Q14999 1698 aa28.6■■■□□ 2.17
ALKBH4-201ENST00000292566 RANGAP1P46060 587 aaPredicted RBP28.6■■■□□ 2.17
ALKBH4-201ENST00000292566 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
ALKBH4-201ENST00000292566 ABCA5Q8WWZ7 1642 aa28.53■■■□□ 2.16
ALKBH4-201ENST00000292566 TTBK1Q5TCY1 1321 aaPredicted RBP28.51■■■□□ 2.15
ALKBH4-201ENST00000292566 APLP2Q06481 763 aa28.5■■■□□ 2.15
ALKBH4-201ENST00000292566 ARHGAP35Q9NRY4 1499 aa28.48■■■□□ 2.15
ALKBH4-201ENST00000292566 MRC2Q9UBG0 1479 aa28.48■■■□□ 2.15
ALKBH4-201ENST00000292566 TARBP1Q13395 1621 aaKnown RBP28.45■■■□□ 2.14
ALKBH4-201ENST00000292566 ZEB1P37275 1124 aaPredicted RBP28.45■■■□□ 2.14
ALKBH4-201ENST00000292566 GAPVD1Q14C86 1478 aa28.42■■■□□ 2.14
ALKBH4-201ENST00000292566 CTTNBP2Q8WZ74 1663 aa28.39■■■□□ 2.14
ALKBH4-201ENST00000292566 TDRD9Q8NDG6 1382 aaKnown RBP28.36■■■□□ 2.13
ALKBH4-201ENST00000292566 WDR62O43379 1518 aa28.31■■■□□ 2.12
ALKBH4-201ENST00000292566 PBRM1Q86U86 1689 aa28.3■■■□□ 2.12
ALKBH4-201ENST00000292566 EFCAB5A4FU69 1503 aa28.27■■■□□ 2.12
ALKBH4-201ENST00000292566 ERCC6Q03468 1493 aa28.25■■■□□ 2.11
ALKBH4-201ENST00000292566 IFT140Q96RY7 1462 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms