RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 NISCHQ9Y2I1 1504 aa48.15■■■■■ 5.3
HIGD1A-201ENST00000321331 CCDC180Q9P1Z9 1646 aa42.85■■■■■ 4.45
HIGD1A-201ENST00000321331 ABCC9O60706 1549 aa41.93■■■■■ 4.3
HIGD1A-201ENST00000321331 RB1CC1Q8TDY2 1594 aa40.35■■■■■ 4.05
HIGD1A-201ENST00000321331 NACADO15069 1562 aa40.29■■■■■ 4.04
HIGD1A-201ENST00000321331 DCAF8L2P0C7V8 631 aa40.29■■■■■ 4.04
HIGD1A-201ENST00000321331 ZCCHC6Q5VYS8 1495 aaKnown RBP40.1■■■■■ 4.01
HIGD1A-201ENST00000321331 MYO15BQ96JP2 1530 aa40.03■■■■■ 4
HIGD1A-201ENST00000321331 DCAF1Q9Y4B6 1507 aa39.86■■■■□ 3.97
HIGD1A-201ENST00000321331 UNC13AQ9UPW8 1703 aa39.38■■■■□ 3.89
HIGD1A-201ENST00000321331 PABPN1Q86U42 306 aaKnown RBP eCLIP39.18■■■■□ 3.86
HIGD1A-201ENST00000321331 BICRAQ9NZM4 1560 aa39.07■■■■□ 3.85
HIGD1A-201ENST00000321331 SCRIBQ14160 1630 aa39.07■■■■□ 3.84
HIGD1A-201ENST00000321331 SHROOM4Q9ULL8 1493 aa38.73■■■■□ 3.79
HIGD1A-201ENST00000321331 DNAJC5BQ9UF47 199 aa38.46■■■■□ 3.75
HIGD1A-201ENST00000321331 EIF4G1Q04637 1599 aaKnown RBP38.08■■■■□ 3.69
HIGD1A-201ENST00000321331 CC2D2AQ9P2K1 1620 aa37.93■■■■□ 3.66
HIGD1A-201ENST00000321331 CECR2Q9BXF3 1484 aa37.7■■■■□ 3.63
HIGD1A-201ENST00000321331 SMARCA4P51532 1647 aa37.37■■■■□ 3.57
HIGD1A-201ENST00000321331 BAZ1AQ9NRL2 1556 aaPredicted RBP37.35■■■■□ 3.57
HIGD1A-201ENST00000321331 ATAD2BQ9ULI0 1458 aa37.18■■■■□ 3.54
HIGD1A-201ENST00000321331 NCAPD3P42695 1498 aa37.17■■■■□ 3.54
HIGD1A-201ENST00000321331 SMARCA2P51531 1590 aa37.16■■■■□ 3.54
HIGD1A-201ENST00000321331 MROH2BQ7Z745 1585 aa37.09■■■■□ 3.53
HIGD1A-201ENST00000321331 PEG3Q9GZU2 1588 aa37.01■■■■□ 3.51
HIGD1A-201ENST00000321331 HMGXB3Q12766 1538 aa36.99■■■■□ 3.51
HIGD1A-201ENST00000321331 BAZ1BQ9UIG0 1483 aaKnown RBP36.89■■■■□ 3.5
HIGD1A-201ENST00000321331 WIZO95785 1651 aa36.7■■■■□ 3.47
HIGD1A-201ENST00000321331 RSF1Q96T23 1441 aaPredicted RBP36.66■■■■□ 3.46
HIGD1A-201ENST00000321331 TOP2AP11388 1531 aaKnown RBP36.32■■■■□ 3.4
HIGD1A-201ENST00000321331 NESP48681 1621 aa36.25■■■■□ 3.39
HIGD1A-201ENST00000321331 LAMC3Q9Y6N6 1575 aa36.21■■■■□ 3.39
HIGD1A-201ENST00000321331 ERCC6Q03468 1493 aa36.19■■■■□ 3.38
HIGD1A-201ENST00000321331 CADPSQ9ULU8 1353 aa36.1■■■■□ 3.37
HIGD1A-201ENST00000321331 PDS5BQ9NTI5 1447 aa35.98■■■■□ 3.35
HIGD1A-201ENST00000321331 CCDC88BA6NC98 1476 aa35.89■■■■□ 3.34
HIGD1A-201ENST00000321331 CFTRP13569 1480 aa35.86■■■■□ 3.33
HIGD1A-201ENST00000321331 KIF21AQ7Z4S6 1674 aa35.84■■■■□ 3.33
HIGD1A-201ENST00000321331 CUX2O14529 1486 aa35.8■■■■□ 3.32
HIGD1A-201ENST00000321331 SUPT5HO00267 1087 aaKnown RBP35.75■■■■□ 3.31
HIGD1A-201ENST00000321331 THOC2Q8NI27 1593 aaKnown RBP35.72■■■■□ 3.31
HIGD1A-201ENST00000321331 FANCD2Q9BXW9 1451 aa35.68■■■■□ 3.3
HIGD1A-201ENST00000321331 CEP164Q9UPV0 1460 aa35.65■■■■□ 3.3
HIGD1A-201ENST00000321331 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
HIGD1A-201ENST00000321331 PRDM2Q13029 1718 aa35.59■■■■□ 3.29
HIGD1A-201ENST00000321331 WDR62O43379 1518 aa35.47■■■■□ 3.27
HIGD1A-201ENST00000321331 URB2Q14146 1524 aaKnown RBP35.29■■■■□ 3.24
HIGD1A-201ENST00000321331 ABCC8Q09428 1581 aa35.14■■■■□ 3.22
HIGD1A-201ENST00000321331 TOPBP1Q92547 1522 aa35.09■■■■□ 3.21
HIGD1A-201ENST00000321331 DNMBPQ6XZF7 1577 aa35.06■■■■□ 3.2
HIGD1A-201ENST00000321331 IFT140Q96RY7 1462 aa34.91■■■■□ 3.18
HIGD1A-201ENST00000321331 POLA1P09884 1462 aaPredicted RBP34.79■■■■□ 3.16
HIGD1A-201ENST00000321331 CUX1P39880 1505 aa34.79■■■■□ 3.16
HIGD1A-201ENST00000321331 DNAJC5Q9H3Z4 198 aa34.73■■■■□ 3.15
HIGD1A-201ENST00000321331 ZNF608Q9ULD9 1512 aaPredicted RBP34.71■■■■□ 3.15
HIGD1A-201ENST00000321331 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
HIGD1A-201ENST00000321331 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.14
HIGD1A-201ENST00000321331 SOGA1O94964 1423 aa34.66■■■■□ 3.14
HIGD1A-201ENST00000321331 RAD54L2Q9Y4B4 1467 aa34.63■■■■□ 3.13
HIGD1A-201ENST00000321331 WRNQ14191 1432 aaPredicted RBP eCLIP34.61■■■■□ 3.13
HIGD1A-201ENST00000321331 EIF4G3O43432 1585 aaKnown RBP34.59■■■■□ 3.13
HIGD1A-201ENST00000321331 AQRO60306 1485 aaKnown RBP eCLIP34.52■■■■□ 3.123e-7■■■□□ 16.1
HIGD1A-201ENST00000321331 TOP2BQ02880 1626 aa34.52■■■■□ 3.12
HIGD1A-201ENST00000321331 BIVM-ERCC5R4GMW8 1640 aa34.51■■■■□ 3.11
HIGD1A-201ENST00000321331 SYNJ1O43426 1573 aa34.48■■■■□ 3.11
HIGD1A-201ENST00000321331 WDR97A6NE52 1622 aa34.47■■■■□ 3.11
HIGD1A-201ENST00000321331 TDRD9Q8NDG6 1382 aaKnown RBP34.46■■■■□ 3.11
HIGD1A-201ENST00000321331 ABCA10Q8WWZ4 1543 aa34.38■■■■□ 3.09
HIGD1A-201ENST00000321331 OSCARQ8IYS5 282 aa34.34■■■■□ 3.09
HIGD1A-201ENST00000321331 GRIN2BQ13224 1484 aa34.27■■■■□ 3.08
HIGD1A-201ENST00000321331 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
HIGD1A-201ENST00000321331 ABCA5Q8WWZ7 1642 aa34.22■■■■□ 3.07
HIGD1A-201ENST00000321331 SNAPC4Q5SXM2 1469 aa34.22■■■■□ 3.07
HIGD1A-201ENST00000321331 MAGI1Q96QZ7 1491 aaPredicted RBP34.19■■■■□ 3.06
HIGD1A-201ENST00000321331 PBRM1Q86U86 1689 aa34.18■■■■□ 3.06
HIGD1A-201ENST00000321331 FBLN2P98095 1184 aa34.16■■■■□ 3.06
HIGD1A-201ENST00000321331 CHD1O14646 1710 aa34.15■■■■□ 3.06
HIGD1A-201ENST00000321331 CHMP7Q8WUX9 453 aaPredicted RBP34.08■■■■□ 3.05
HIGD1A-201ENST00000321331 SYNJ2O15056 1496 aa34.05■■■■□ 3.04
HIGD1A-201ENST00000321331 ERICH3Q5RHP9 1530 aa33.97■■■■□ 3.03
HIGD1A-201ENST00000321331 ADAMTS12P58397 1594 aa33.91■■■■□ 3.02
HIGD1A-201ENST00000321331 KIF27Q86VH2 1401 aa33.9■■■■□ 3.02
HIGD1A-201ENST00000321331 FHAD1B1AJZ9 1412 aa33.88■■■■□ 3.01
HIGD1A-201ENST00000321331 GRIN2AQ12879 1464 aa33.83■■■■□ 3.01
HIGD1A-201ENST00000321331 TRIM41Q8WV44 630 aa33.79■■■■□ 3
HIGD1A-201ENST00000321331 CLASP1Q7Z460 1538 aa33.78■■■■□ 3
HIGD1A-201ENST00000321331 ARHGEF11O15085 1522 aa33.75■■■□□ 2.99
HIGD1A-201ENST00000321331 RIMBP3CA6NJZ7 1639 aa33.74■■■□□ 2.99
HIGD1A-201ENST00000321331 RIMBP3BA6NNM3 1639 aa33.74■■■□□ 2.99
HIGD1A-201ENST00000321331 RIMBP3Q9UFD9 1639 aa33.74■■■□□ 2.99
HIGD1A-201ENST00000321331 IGF1RP08069 1367 aa33.72■■■□□ 2.99
HIGD1A-201ENST00000321331 CUL7Q14999 1698 aa33.67■■■□□ 2.98
HIGD1A-201ENST00000321331 NUP160Q12769 1436 aa33.66■■■□□ 2.98
HIGD1A-201ENST00000321331 CEP170Q5SW79 1584 aa33.63■■■□□ 2.97
HIGD1A-201ENST00000321331 CARMIL1Q5VZK9 1371 aa33.55■■■□□ 2.96
HIGD1A-201ENST00000321331 RUSC2Q8N2Y8 1516 aa33.51■■■□□ 2.96
HIGD1A-201ENST00000321331 ARAP1Q96P48 1450 aa33.46■■■□□ 2.95
HIGD1A-201ENST00000321331 CYB5RLQ6IPT4 315 aa33.46■■■□□ 2.95
HIGD1A-201ENST00000321331 SHROOM2Q13796 1616 aa33.4■■■□□ 2.94
HIGD1A-201ENST00000321331 KIAA0586Q9BVV6 1533 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms