RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 NISCHQ9Y2I1 1504 aa38.66■■■■□ 3.78
CHRFAM7A-202ENST00000397827 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.86
CHRFAM7A-202ENST00000397827 SHROOM4Q9ULL8 1493 aa32.85■■■□□ 2.85
CHRFAM7A-202ENST00000397827 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
CHRFAM7A-202ENST00000397827 DCAF8L2P0C7V8 631 aa32.2■■■□□ 2.75
CHRFAM7A-202ENST00000397827 SUPT5HO00267 1087 aaKnown RBP32.1■■■□□ 2.73
CHRFAM7A-202ENST00000397827 DCAF1Q9Y4B6 1507 aa31.69■■■□□ 2.66
CHRFAM7A-202ENST00000397827 CHIC1Q5VXU3 224 aa31.07■■■□□ 2.56
CHRFAM7A-202ENST00000397827 SCRIBQ14160 1630 aa30.89■■■□□ 2.54
CHRFAM7A-202ENST00000397827 MYO15BQ96JP2 1530 aa30.89■■■□□ 2.54
CHRFAM7A-202ENST00000397827 ABCC9O60706 1549 aa30.78■■■□□ 2.52
CHRFAM7A-202ENST00000397827 NACADO15069 1562 aa30.53■■■□□ 2.48
CHRFAM7A-202ENST00000397827 RSF1Q96T23 1441 aaPredicted RBP30.52■■■□□ 2.48
CHRFAM7A-202ENST00000397827 CECR2Q9BXF3 1484 aa30.2■■■□□ 2.43
CHRFAM7A-202ENST00000397827 LOC105371045A0A1W2PR82 267 aa30.17■■■□□ 2.42
CHRFAM7A-202ENST00000397827 RB1CC1Q8TDY2 1594 aa30.16■■■□□ 2.42
CHRFAM7A-202ENST00000397827 MROH2BQ7Z745 1585 aa30.06■■■□□ 2.4
CHRFAM7A-202ENST00000397827 TRIM41Q8WV44 630 aa29.9■■■□□ 2.38
CHRFAM7A-202ENST00000397827 WIZO95785 1651 aa29.9■■■□□ 2.38
CHRFAM7A-202ENST00000397827 PCGF6Q9BYE7 350 aa29.89■■■□□ 2.38
CHRFAM7A-202ENST00000397827 BAZ1AQ9NRL2 1556 aaPredicted RBP29.7■■■□□ 2.35
CHRFAM7A-202ENST00000397827 FAM9AQ8IZU1 332 aaPredicted RBP29.69■■■□□ 2.34
CHRFAM7A-202ENST00000397827 HRCP23327 699 aa29.68■■■□□ 2.34
CHRFAM7A-202ENST00000397827 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
CHRFAM7A-202ENST00000397827 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
CHRFAM7A-202ENST00000397827 EHMT2Q96KQ7 1210 aa29.47■■■□□ 2.31
CHRFAM7A-202ENST00000397827 PABPN1Q86U42 306 aaKnown RBP eCLIP29.42■■■□□ 2.3
CHRFAM7A-202ENST00000397827 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.3
CHRFAM7A-202ENST00000397827 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
CHRFAM7A-202ENST00000397827 TRIM26Q12899 539 aaPredicted RBP29.34■■■□□ 2.29
CHRFAM7A-202ENST00000397827 BICRAQ9NZM4 1560 aa29.3■■■□□ 2.28
CHRFAM7A-202ENST00000397827 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
CHRFAM7A-202ENST00000397827 SMARCA2P51531 1590 aa29.24■■■□□ 2.27
CHRFAM7A-202ENST00000397827 PPARGC1BQ86YN6 1023 aaKnown RBP29.16■■■□□ 2.26
CHRFAM7A-202ENST00000397827 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
CHRFAM7A-202ENST00000397827 PELP1Q8IZL8 1130 aaKnown RBP29.04■■■□□ 2.24
CHRFAM7A-202ENST00000397827 PEG3Q9GZU2 1588 aa28.91■■■□□ 2.22
CHRFAM7A-202ENST00000397827 SOGA1O94964 1423 aa28.83■■■□□ 2.21
CHRFAM7A-202ENST00000397827 ATAD2BQ9ULI0 1458 aa28.8■■■□□ 2.2
CHRFAM7A-202ENST00000397827 RUSC2Q8N2Y8 1516 aa28.71■■■□□ 2.19
CHRFAM7A-202ENST00000397827 BAZ1BQ9UIG0 1483 aaKnown RBP28.71■■■□□ 2.19
CHRFAM7A-202ENST00000397827 WRNQ14191 1432 aaPredicted RBP eCLIP28.67■■■□□ 2.18
CHRFAM7A-202ENST00000397827 CSRNP3Q8WYN3 585 aa28.64■■■□□ 2.18
CHRFAM7A-202ENST00000397827 EEA1Q15075 1411 aa28.59■■■□□ 2.17
CHRFAM7A-202ENST00000397827 CEP162Q5TB80 1403 aa28.57■■■□□ 2.16
CHRFAM7A-202ENST00000397827 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
CHRFAM7A-202ENST00000397827 ZEB1P37275 1124 aaPredicted RBP28.54■■■□□ 2.16
CHRFAM7A-202ENST00000397827 UBTFP17480 764 aaKnown RBP28.53■■■□□ 2.16
CHRFAM7A-202ENST00000397827 TNIKQ9UKE5 1360 aa28.53■■■□□ 2.16
CHRFAM7A-202ENST00000397827 TTBK1Q5TCY1 1321 aaPredicted RBP28.44■■■□□ 2.14
CHRFAM7A-202ENST00000397827 GOLGA3Q08378 1498 aa28.41■■■□□ 2.14
CHRFAM7A-202ENST00000397827 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
CHRFAM7A-202ENST00000397827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.27■■■□□ 2.12
CHRFAM7A-202ENST00000397827 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
CHRFAM7A-202ENST00000397827 HMGXB3Q12766 1538 aa28.23■■■□□ 2.11
CHRFAM7A-202ENST00000397827 KIF21BO75037 1637 aa28.22■■■□□ 2.11
CHRFAM7A-202ENST00000397827 TOP2BQ02880 1626 aa28.2■■■□□ 2.1
CHRFAM7A-202ENST00000397827 CCER1Q8TC90 406 aaPredicted RBP28.16■■■□□ 2.1
CHRFAM7A-202ENST00000397827 RAPGEF2Q9Y4G8 1499 aa28.14■■■□□ 2.1
CHRFAM7A-202ENST00000397827 CLIP1P30622 1438 aa28.09■■■□□ 2.09
CHRFAM7A-202ENST00000397827 MYT1Q01538 1121 aa28.09■■■□□ 2.09
CHRFAM7A-202ENST00000397827 BIVM-ERCC5R4GMW8 1640 aa28.09■■■□□ 2.09
CHRFAM7A-202ENST00000397827 RANGAP1P46060 587 aaPredicted RBP28.07■■■□□ 2.08
CHRFAM7A-202ENST00000397827 CUX1P39880 1505 aa28■■■□□ 2.07
CHRFAM7A-202ENST00000397827 CFTRP13569 1480 aa27.99■■■□□ 2.07
CHRFAM7A-202ENST00000397827 SCAF1Q9H7N4 1312 aaKnown RBP27.96■■■□□ 2.07
CHRFAM7A-202ENST00000397827 VPS8Q8N3P4 1428 aa27.93■■■□□ 2.06
CHRFAM7A-202ENST00000397827 PRXQ9BXM0 1461 aa27.86■■■□□ 2.05
CHRFAM7A-202ENST00000397827 APLP2Q06481 763 aa27.82■■■□□ 2.04
CHRFAM7A-202ENST00000397827 ERICH3Q5RHP9 1530 aa27.81■■■□□ 2.04
CHRFAM7A-202ENST00000397827 KIF27Q86VH2 1401 aa27.8■■■□□ 2.04
CHRFAM7A-202ENST00000397827 HNRNPUL2Q1KMD3 747 aaKnown RBP27.76■■■□□ 2.03
CHRFAM7A-202ENST00000397827 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
CHRFAM7A-202ENST00000397827 PRDM2Q13029 1718 aa27.71■■■□□ 2.03
CHRFAM7A-202ENST00000397827 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.03
CHRFAM7A-202ENST00000397827 ARAP1Q96P48 1450 aa27.66■■■□□ 2.02
CHRFAM7A-202ENST00000397827 CUX2O14529 1486 aa27.6■■■□□ 2.01
CHRFAM7A-202ENST00000397827 FGD5Q6ZNL6 1462 aa27.54■■■□□ 2
CHRFAM7A-202ENST00000397827 IGF1RP08069 1367 aa27.54■■■□□ 2
CHRFAM7A-202ENST00000397827 KANK4Q5T7N3 995 aaPredicted RBP27.53■■■□□ 2
CHRFAM7A-202ENST00000397827 ARHGAP35Q9NRY4 1499 aa27.48■■□□□ 1.99
CHRFAM7A-202ENST00000397827 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
CHRFAM7A-202ENST00000397827 DIEXFQ68CQ4 756 aaKnown RBP27.45■■□□□ 1.98
CHRFAM7A-202ENST00000397827 CARMIL1Q5VZK9 1371 aa27.42■■□□□ 1.98
CHRFAM7A-202ENST00000397827 NESP48681 1621 aa27.38■■□□□ 1.97
CHRFAM7A-202ENST00000397827 RAD54L2Q9Y4B4 1467 aa27.31■■□□□ 1.96
CHRFAM7A-202ENST00000397827 ZNF316A6NFI3 1004 aaPredicted RBP27.3■■□□□ 1.96
CHRFAM7A-202ENST00000397827 DNMBPQ6XZF7 1577 aa27.27■■□□□ 1.96
CHRFAM7A-202ENST00000397827 TOPBP1Q92547 1522 aa27.26■■□□□ 1.95
CHRFAM7A-202ENST00000397827 POLA1P09884 1462 aaPredicted RBP27.25■■□□□ 1.95
CHRFAM7A-202ENST00000397827 RRBP1Q9P2E9 1410 aaKnown RBP27.23■■□□□ 1.95
CHRFAM7A-202ENST00000397827 P3H3Q8IVL6 736 aa27.19■■□□□ 1.94
CHRFAM7A-202ENST00000397827 ABCA10Q8WWZ4 1543 aa27.19■■□□□ 1.94
CHRFAM7A-202ENST00000397827 CCNB3Q8WWL7 1395 aa27.16■■□□□ 1.94
CHRFAM7A-202ENST00000397827 DHX57Q6P158 1386 aaKnown RBP27.15■■□□□ 1.94
CHRFAM7A-202ENST00000397827 DNAJC5BQ9UF47 199 aa27.14■■□□□ 1.94
CHRFAM7A-202ENST00000397827 ITGAEP38570 1179 aa27.14■■□□□ 1.94
CHRFAM7A-202ENST00000397827 TIAM1Q13009 1591 aa27.12■■□□□ 1.93
CHRFAM7A-202ENST00000397827 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
CHRFAM7A-202ENST00000397827 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms