RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeastyeast

Gene VMA4, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA4YOR332W DRS1P32892 752 aaKnown RBP12.57□□□□□ -0.4
VMA4YOR332W MTC1P47018 478 aaKnown RBP12.21□□□□□ -0.45
VMA4YOR332W BFR2Q06631 534 aaKnown RBP11.01□□□□□ -0.65
VMA4YOR332W DIP2Q12220 943 aaPredicted RBP10.6□□□□□ -0.71
VMA4YOR332W AVT3P36062 692 aa10.52□□□□□ -0.73
VMA4YOR332W TFA1P36100 482 aa10.51□□□□□ -0.73
VMA4YOR332W SGS1P35187 1447 aa10.01□□□□□ -0.81
VMA4YOR332W RSE1Q04693 1361 aaKnown RBP9.93□□□□□ -0.82
VMA4YOR332W ISW2Q08773 1120 aa9.88□□□□□ -0.83
VMA4YOR332W SPA2P23201 1466 aaKnown RBP9.87□□□□□ -0.83
VMA4YOR332W INO80P53115 1489 aa9.76□□□□□ -0.85
VMA4YOR332W SSN2P38931 1420 aa9.75□□□□□ -0.85
VMA4YOR332W RPG1P38249 964 aaKnown RBP9.74□□□□□ -0.85
VMA4YOR332W FAP1P53971 965 aa9.74□□□□□ -0.85
VMA4YOR332W PRI1P10363 409 aa9.64□□□□□ -0.87
VMA4YOR332W RPL17AP05740 184 aaKnown RBP9.55□□□□□ -0.88
VMA4YOR332W RPL17BP46990 184 aaKnown RBP9.55□□□□□ -0.88
VMA4YOR332W TCB3Q03640 1545 aaKnown RBP9.49□□□□□ -0.89
VMA4YOR332W AAD16Q02895 342 aa9.45□□□□□ -0.9
VMA4YOR332W REB1P21538 810 aa9.41□□□□□ -0.9
VMA4YOR332W TY1B-DR4Q07793 1604 aa9.35□□□□□ -0.91
VMA4YOR332W HSL1P34244 1518 aa9.25□□□□□ -0.93
VMA4YOR332W RQC2Q12532 1038 aaKnown RBP9.23□□□□□ -0.93
VMA4YOR332W SPT21P35209 758 aa9.2□□□□□ -0.94
VMA4YOR332W TSR3Q12094 313 aaKnown RBP9.2□□□□□ -0.94
VMA4YOR332W SPT6P23615 1451 aaKnown RBP9.18□□□□□ -0.94
VMA4YOR332W MON2P48563 1636 aaPredicted RBP9.14□□□□□ -0.95
VMA4YOR332W RIM101P33400 625 aa9.12□□□□□ -0.95
VMA4YOR332W HIR3P47171 1648 aa9.09□□□□□ -0.95
VMA4YOR332W SKI3P17883 1432 aaKnown RBP9.09□□□□□ -0.95
VMA4YOR332W PRY3P47033 881 aa9.09□□□□□ -0.95
VMA4YOR332W XRN1P22147 1528 aaKnown RBP9.05□□□□□ -0.96
VMA4YOR332W PTP3P40048 928 aa9.04□□□□□ -0.96
VMA4YOR332W SWR1Q05471 1514 aa8.99□□□□□ -0.97
VMA4YOR332W CHD1P32657 1468 aa8.97□□□□□ -0.97
VMA4YOR332W REV3P14284 1504 aa8.97□□□□□ -0.97
VMA4YOR332W SIN3P22579 1536 aa8.97□□□□□ -0.97
VMA4YOR332W THO2P53552 1597 aaKnown RBP8.92□□□□□ -0.98
VMA4YOR332W SSK2P53599 1579 aa8.91□□□□□ -0.98
VMA4YOR332W MMS22Q06164 1454 aa8.9□□□□□ -0.98
VMA4YOR332W SSP1P38871 571 aa8.86□□□□□ -0.99
VMA4YOR332W OXP1P28273 1286 aa8.85□□□□□ -0.99
VMA4YOR332W MRPL32P25348 183 aa8.83□□□□□ -1
VMA4YOR332W YKR023WP36119 530 aaKnown RBP8.83□□□□□ -1
VMA4YOR332W YAH1Q12184 172 aaKnown RBP8.8□□□□□ -1
VMA4YOR332W DMA1P38823 416 aa8.79□□□□□ -1
VMA4YOR332W DNA2P38859 1522 aa8.79□□□□□ -1
VMA4YOR332W TAF2P23255 1407 aa8.78□□□□□ -1
VMA4YOR332W MYO2P19524 1574 aaKnown RBP8.78□□□□□ -1
VMA4YOR332W ESP1Q03018 1630 aa8.77□□□□□ -1.01
VMA4YOR332W POL1P13382 1468 aa8.76□□□□□ -1.01
VMA4YOR332W YIL055CP40523 627 aaKnown RBP8.75□□□□□ -1.01
VMA4YOR332W STU1P38198 1513 aa8.74□□□□□ -1.01
VMA4YOR332W KOG1P38873 1557 aa8.71□□□□□ -1.02
VMA4YOR332W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
VMA4YOR332W YPK9Q12697 1472 aa8.68□□□□□ -1.02
VMA4YOR332W HOP09932 586 aa8.67□□□□□ -1.02
VMA4YOR332W YTA7P40340 1379 aa8.67□□□□□ -1.02
VMA4YOR332W BUD4P47136 1447 aa8.66□□□□□ -1.02
VMA4YOR332W YLR271WQ06152 274 aa8.66□□□□□ -1.02
VMA4YOR332W ATG2P53855 1592 aa8.65□□□□□ -1.02
VMA4YOR332W ECM5Q03214 1411 aa8.65□□□□□ -1.02
VMA4YOR332W TFC8Q12308 588 aa8.65□□□□□ -1.02
VMA4YOR332W UFD4P33202 1483 aa8.64□□□□□ -1.03
VMA4YOR332W BPT1P14772 1559 aa8.62□□□□□ -1.03
VMA4YOR332W DCD1P06773 312 aa8.61□□□□□ -1.03
VMA4YOR332W RSM7P47150 247 aa8.6□□□□□ -1.03
VMA4YOR332W YOR1P53049 1477 aa8.59□□□□□ -1.03
VMA4YOR332W CDC27P38042 758 aa8.59□□□□□ -1.03
VMA4YOR332W MYO4P32492 1471 aa8.58□□□□□ -1.04
VMA4YOR332W TRM732Q03496 1420 aa8.58□□□□□ -1.04
VMA4YOR332W YCK3P39962 524 aa8.57□□□□□ -1.04
VMA4YOR332W HAA1Q12753 694 aaKnown RBP8.57□□□□□ -1.04
VMA4YOR332W SCC2Q04002 1493 aa8.56□□□□□ -1.04
VMA4YOR332W RKR1Q04781 1562 aa8.55□□□□□ -1.04
VMA4YOR332W PEP1P32319 1579 aa8.53□□□□□ -1.04
VMA4YOR332W RPO31P04051 1460 aa8.53□□□□□ -1.04
VMA4YOR332W IKI3Q06706 1349 aaKnown RBP8.52□□□□□ -1.05
VMA4YOR332W MGA2P40578 1113 aa8.51□□□□□ -1.05
VMA4YOR332W SAS10Q12136 610 aaPredicted RBP8.5□□□□□ -1.05
VMA4YOR332W SMC4Q12267 1418 aa8.5□□□□□ -1.05
VMA4YOR332W NUP170P38181 1502 aa8.49□□□□□ -1.05
VMA4YOR332W TOP2P06786 1428 aaKnown RBP8.49□□□□□ -1.05
VMA4YOR332W MDS3P53094 1487 aa8.46□□□□□ -1.05
VMA4YOR332W SNQ2P32568 1501 aaKnown RBP8.45□□□□□ -1.06
VMA4YOR332W YCF1P39109 1515 aaKnown RBP8.45□□□□□ -1.06
VMA4YOR332W AI2P03876 854 aa8.44□□□□□ -1.06
VMA4YOR332W SPP41P38904 1435 aa8.44□□□□□ -1.06
VMA4YOR332W CST9Q06032 482 aa8.43□□□□□ -1.06
VMA4YOR332W BCH2P36122 765 aa8.42□□□□□ -1.06
VMA4YOR332W PSD2P53037 1138 aaKnown RBP8.4□□□□□ -1.06
VMA4YOR332W TAF7Q05021 590 aa8.4□□□□□ -1.06
VMA4YOR332W STH1P32597 1359 aa8.38□□□□□ -1.07
VMA4YOR332W SSM4P40318 1319 aa8.38□□□□□ -1.07
VMA4YOR332W BBC1P47068 1157 aa8.37□□□□□ -1.07
VMA4YOR332W TY2B-LR1P0C2J3 1770 aa8.36□□□□□ -1.07
VMA4YOR332W TY2B-FP0CX63 1770 aa8.36□□□□□ -1.07
VMA4YOR332W TY2B-GR2P0CX64 1770 aa8.36□□□□□ -1.07
VMA4YOR332W TY2B-CP25384 1770 aa8.36□□□□□ -1.07
VMA4YOR332W TY2B-DR2Q03494 1770 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms