RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W MTC1P47018 478 aaKnown RBP16.34■□□□□ 0.21
SNF7YLR025W DRS1P32892 752 aaKnown RBP16.32■□□□□ 0.2
SNF7YLR025W BFR2Q06631 534 aaKnown RBP14.08□□□□□ -0.16
SNF7YLR025W DIP2Q12220 943 aaPredicted RBP13.94□□□□□ -0.18
SNF7YLR025W AVT3P36062 692 aa13.73□□□□□ -0.21
SNF7YLR025W FAP1P53971 965 aa13.49□□□□□ -0.25
SNF7YLR025W ISW2Q08773 1120 aa13.34□□□□□ -0.27
SNF7YLR025W TFA1P36100 482 aa13.22□□□□□ -0.29
SNF7YLR025W RSE1Q04693 1361 aaKnown RBP13.19□□□□□ -0.3
SNF7YLR025W PRI1P10363 409 aa13.18□□□□□ -0.3
SNF7YLR025W RPG1P38249 964 aaKnown RBP13.14□□□□□ -0.31
SNF7YLR025W AAD16Q02895 342 aa12.97□□□□□ -0.33
SNF7YLR025W RPL17AP05740 184 aaKnown RBP12.67□□□□□ -0.38
SNF7YLR025W RPL17BP46990 184 aaKnown RBP12.67□□□□□ -0.38
SNF7YLR025W PRY3P47033 881 aa12.6□□□□□ -0.39
SNF7YLR025W REB1P21538 810 aa12.54□□□□□ -0.4
SNF7YLR025W SGS1P35187 1447 aa12.53□□□□□ -0.4
SNF7YLR025W TSR3Q12094 313 aaKnown RBP12.49□□□□□ -0.41
SNF7YLR025W INO80P53115 1489 aa12.22□□□□□ -0.45
SNF7YLR025W SPT21P35209 758 aa12.19□□□□□ -0.46
SNF7YLR025W RIM101P33400 625 aa12.05□□□□□ -0.48
SNF7YLR025W SPA2P23201 1466 aaKnown RBP12.04□□□□□ -0.48
SNF7YLR025W MRPL32P25348 183 aa12.04□□□□□ -0.48
SNF7YLR025W TCB3Q03640 1545 aaKnown RBP12.01□□□□□ -0.49
SNF7YLR025W SSN2P38931 1420 aa11.99□□□□□ -0.49
SNF7YLR025W HAA1Q12753 694 aaKnown RBP11.95□□□□□ -0.5
SNF7YLR025W YCK3P39962 524 aa11.9□□□□□ -0.5
SNF7YLR025W YKR023WP36119 530 aaKnown RBP11.82□□□□□ -0.52
SNF7YLR025W TY1B-DR4Q07793 1604 aa11.73□□□□□ -0.53
SNF7YLR025W OXP1P28273 1286 aa11.64□□□□□ -0.55
SNF7YLR025W SPT6P23615 1451 aaKnown RBP11.63□□□□□ -0.55
SNF7YLR025W TFC8Q12308 588 aa11.6□□□□□ -0.55
SNF7YLR025W HSL1P34244 1518 aa11.6□□□□□ -0.55
SNF7YLR025W MON2P48563 1636 aaPredicted RBP11.59□□□□□ -0.55
SNF7YLR025W CDC27P38042 758 aa11.57□□□□□ -0.56
SNF7YLR025W HOP09932 586 aa11.56□□□□□ -0.56
SNF7YLR025W PTP3P40048 928 aa11.54□□□□□ -0.56
SNF7YLR025W YIL055CP40523 627 aaKnown RBP11.53□□□□□ -0.56
SNF7YLR025W SSP1P38871 571 aa11.48□□□□□ -0.57
SNF7YLR025W SWR1Q05471 1514 aa11.47□□□□□ -0.57
SNF7YLR025W DCD1P06773 312 aa11.45□□□□□ -0.58
SNF7YLR025W YAH1Q12184 172 aaKnown RBP11.44□□□□□ -0.58
SNF7YLR025W XRN1P22147 1528 aaKnown RBP11.43□□□□□ -0.58
SNF7YLR025W HIR3P47171 1648 aa11.42□□□□□ -0.58
SNF7YLR025W RSM7P47150 247 aa11.33□□□□□ -0.6
SNF7YLR025W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.33□□□□□ -0.6not detected
SNF7YLR025W YLR271WQ06152 274 aa11.31□□□□□ -0.6
SNF7YLR025W YGL015CP33199 130 aa11.28□□□□□ -0.6
SNF7YLR025W BCH2P36122 765 aa11.25□□□□□ -0.61
SNF7YLR025W REV3P14284 1504 aa11.24□□□□□ -0.61
SNF7YLR025W TAF2P23255 1407 aa11.22□□□□□ -0.61
SNF7YLR025W RQC2Q12532 1038 aaKnown RBP11.19□□□□□ -0.62
SNF7YLR025W THO2P53552 1597 aaKnown RBP11.19□□□□□ -0.62
SNF7YLR025W UBP10P53874 792 aaPredicted RBP11.17□□□□□ -0.62
SNF7YLR025W KOG1P38873 1557 aa11.14□□□□□ -0.63
SNF7YLR025W AI2P03876 854 aa11.13□□□□□ -0.63
SNF7YLR025W SIN3P22579 1536 aa11.12□□□□□ -0.63
SNF7YLR025W DNA2P38859 1522 aa11.12□□□□□ -0.63
SNF7YLR025W MAP2P38174 421 aaKnown RBP11.1□□□□□ -0.63
SNF7YLR025W BBC1P47068 1157 aa11.1□□□□□ -0.63
SNF7YLR025W MGA2P40578 1113 aa11.09□□□□□ -0.63
SNF7YLR025W SSK2P53599 1579 aa11.07□□□□□ -0.64
SNF7YLR025W SCY1P53009 804 aa11.07□□□□□ -0.64
SNF7YLR025W EPS1P40557 701 aa11.05□□□□□ -0.64
SNF7YLR025W BUD4P47136 1447 aa11.04□□□□□ -0.64
SNF7YLR025W MYO2P19524 1574 aaKnown RBP11.03□□□□□ -0.64
SNF7YLR025W SKI3P17883 1432 aaKnown RBP11.03□□□□□ -0.64
SNF7YLR025W PSD2P53037 1138 aaKnown RBP11.02□□□□□ -0.65
SNF7YLR025W ECM5Q03214 1411 aa11.01□□□□□ -0.65
SNF7YLR025W ESP1Q03018 1630 aa10.98□□□□□ -0.65
SNF7YLR025W BDF1P35817 686 aa10.98□□□□□ -0.65
SNF7YLR025W CST9Q06032 482 aa10.94□□□□□ -0.66
SNF7YLR025W SLX5P32828 619 aaKnown RBP10.9□□□□□ -0.66
SNF7YLR025W SAS10Q12136 610 aaPredicted RBP10.87□□□□□ -0.67
SNF7YLR025W YTA7P40340 1379 aa10.86□□□□□ -0.67
SNF7YLR025W ATG2P53855 1592 aa10.86□□□□□ -0.67
SNF7YLR025W STU1P38198 1513 aa10.85□□□□□ -0.67
SNF7YLR025W POL1P13382 1468 aa10.84□□□□□ -0.67
SNF7YLR025W CHD1P32657 1468 aa10.84□□□□□ -0.67
SNF7YLR025W MMS22Q06164 1454 aa10.84□□□□□ -0.67
SNF7YLR025W YPK9Q12697 1472 aa10.83□□□□□ -0.68
SNF7YLR025W DMA1P38823 416 aa10.83□□□□□ -0.68
SNF7YLR025W MDS3P53094 1487 aa10.79□□□□□ -0.68
SNF7YLR025W MRM1P25270 412 aa10.77□□□□□ -0.69
SNF7YLR025W RKR1Q04781 1562 aa10.73□□□□□ -0.69
SNF7YLR025W TIF4632P39936 914 aaKnown RBP10.73□□□□□ -0.69
SNF7YLR025W TAF7Q05021 590 aa10.73□□□□□ -0.69
SNF7YLR025W PEP1P32319 1579 aa10.71□□□□□ -0.69
SNF7YLR025W SCC2Q04002 1493 aa10.71□□□□□ -0.69
SNF7YLR025W YOR1P53049 1477 aa10.68□□□□□ -0.7
SNF7YLR025W UFD4P33202 1483 aa10.68□□□□□ -0.7
SNF7YLR025W RTG3P38165 486 aa10.67□□□□□ -0.7
SNF7YLR025W BPT1P14772 1559 aa10.66□□□□□ -0.7
SNF7YLR025W TGL3P40308 642 aa10.66□□□□□ -0.7
SNF7YLR025W RPO31P04051 1460 aa10.65□□□□□ -0.7
SNF7YLR025W TOP2P06786 1428 aaKnown RBP10.65□□□□□ -0.7
SNF7YLR025W MYO4P32492 1471 aa10.64□□□□□ -0.71
SNF7YLR025W SMC4Q12267 1418 aa10.63□□□□□ -0.71
SNF7YLR025W STH1P32597 1359 aa10.59□□□□□ -0.71
SNF7YLR025W RCR1P38212 213 aa10.56□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms