RNA–Protein interactions for RNA: YKL015W

PUT3, Transcript of Transcriptional activator, yeast

Gene PUT3, Length 2,940 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUT3	YKL015W	MTC1	P47018	478 aa	Known RBP	6.46	□□□□□ -1.38
PUT3	YKL015W	DRS1	P32892	752 aa	Known RBP	6.31	□□□□□ -1.4
PUT3	YKL015W	FAP1	P53971	965 aa		5.71	□□□□□ -1.49
PUT3	YKL015W	BFR2	Q06631	534 aa	Known RBP	5.4	□□□□□ -1.54
PUT3	YKL015W	DIP2	Q12220	943 aa	Predicted RBP	5.4	□□□□□ -1.55
PUT3	YKL015W	PRI1	P10363	409 aa		5.34	□□□□□ -1.56
PUT3	YKL015W	ISW2	Q08773	1120 aa		5.32	□□□□□ -1.56
PUT3	YKL015W	PRY3	P47033	881 aa		5.3	□□□□□ -1.56
PUT3	YKL015W	AAD16	Q02895	342 aa		5.27	□□□□□ -1.57
PUT3	YKL015W	AVT3	P36062	692 aa		5.27	□□□□□ -1.57
PUT3	YKL015W	RPG1	P38249	964 aa	Known RBP	5.24	□□□□□ -1.57
PUT3	YKL015W	RSE1	Q04693	1361 aa	Known RBP	5.18	□□□□□ -1.58
PUT3	YKL015W	MON2	P48563	1636 aa	Predicted RBP	5.15	□□□□□ -1.58
PUT3	YKL015W	TSR3	Q12094	313 aa	Known RBP	5.06	□□□□□ -1.6
PUT3	YKL015W	REB1	P21538	810 aa		5.05	□□□□□ -1.6
PUT3	YKL015W	RPL17A	P05740	184 aa	Known RBP	5.04	□□□□□ -1.6
PUT3	YKL015W	RPL17B	P46990	184 aa	Known RBP	5.04	□□□□□ -1.6
PUT3	YKL015W	INO80	P53115	1489 aa		5	□□□□□ -1.61
PUT3	YKL015W	YCK3	P39962	524 aa		4.99	□□□□□ -1.61
PUT3	YKL015W	HAA1	Q12753	694 aa	Known RBP	4.92	□□□□□ -1.62
PUT3	YKL015W	MRPL32	P25348	183 aa		4.91	□□□□□ -1.62
PUT3	YKL015W	KOG1	P38873	1557 aa		4.81	□□□□□ -1.64
PUT3	YKL015W	SWR1	Q05471	1514 aa		4.8	□□□□□ -1.64
PUT3	YKL015W	SPT21	P35209	758 aa		4.79	□□□□□ -1.64
PUT3	YKL015W	TFA1	P36100	482 aa		4.79	□□□□□ -1.64
PUT3	YKL015W	TCB3	Q03640	1545 aa	Known RBP	4.79	□□□□□ -1.64
PUT3	YKL015W	DNA2	P38859	1522 aa		4.78	□□□□□ -1.64
PUT3	YKL015W	TY1B-DR4	Q07793	1604 aa		4.77	□□□□□ -1.65
PUT3	YKL015W	YKR023W	P36119	530 aa	Known RBP	4.69	□□□□□ -1.66
PUT3	YKL015W	RIM101	P33400	625 aa		4.66	□□□□□ -1.66
PUT3	YKL015W	CDC27	P38042	758 aa		4.66	□□□□□ -1.66
PUT3	YKL015W	HO	P09932	586 aa		4.6	□□□□□ -1.67
PUT3	YKL015W	TFC8	Q12308	588 aa		4.59	□□□□□ -1.67
PUT3	YKL015W	YGL015C	P33199	130 aa		4.59	□□□□□ -1.68
PUT3	YKL015W	DCD1	P06773	312 aa		4.58	□□□□□ -1.68
PUT3	YKL015W	YIL055C	P40523	627 aa	Known RBP	4.57	□□□□□ -1.68
PUT3	YKL015W	PTP3	P40048	928 aa		4.54	□□□□□ -1.68
PUT3	YKL015W	YAH1	Q12184	172 aa	Known RBP	4.54	□□□□□ -1.68
PUT3	YKL015W	OXP1	P28273	1286 aa		4.52	□□□□□ -1.69
PUT3	YKL015W	THO2	P53552	1597 aa	Known RBP	4.51	□□□□□ -1.69
PUT3	YKL015W	HSL1	P34244	1518 aa		4.5	□□□□□ -1.69
PUT3	YKL015W	SGS1	P35187	1447 aa		4.5	□□□□□ -1.69
PUT3	YKL015W	SPA2	P23201	1466 aa	Known RBP	4.49	□□□□□ -1.69
PUT3	YKL015W	MAP2	P38174	421 aa	Known RBP	4.49	□□□□□ -1.69
PUT3	YKL015W	SPT6	P23615	1451 aa	Known RBP	4.48	□□□□□ -1.69
PUT3	YKL015W	UBP10	P53874	792 aa	Predicted RBP	4.47	□□□□□ -1.69
PUT3	YKL015W	BCH2	P36122	765 aa		4.45	□□□□□ -1.7
PUT3	YKL015W	SCY1	P53009	804 aa		4.44	□□□□□ -1.7
PUT3	YKL015W	BUD4	P47136	1447 aa		4.42	□□□□□ -1.7
PUT3	YKL015W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
PUT3	YKL015W	HIR3	P47171	1648 aa		4.39	□□□□□ -1.71
PUT3	YKL015W	ECM5	Q03214	1411 aa		4.38	□□□□□ -1.71
PUT3	YKL015W	MDS3	P53094	1487 aa		4.38	□□□□□ -1.71
PUT3	YKL015W	RSM7	P47150	247 aa		4.37	□□□□□ -1.71
PUT3	YKL015W	BBC1	P47068	1157 aa		4.37	□□□□□ -1.71
PUT3	YKL015W	REV3	P14284	1504 aa		4.37	□□□□□ -1.71
PUT3	YKL015W	PEP1	P32319	1579 aa		4.36	□□□□□ -1.71
PUT3	YKL015W	SLX5	P32828	619 aa	Known RBP	4.36	□□□□□ -1.71
PUT3	YKL015W	EPS1	P40557	701 aa		4.35	□□□□□ -1.71
PUT3	YKL015W	YLR271W	Q06152	274 aa		4.35	□□□□□ -1.71
PUT3	YKL015W	SSP1	P38871	571 aa		4.35	□□□□□ -1.71
PUT3	YKL015W	BDF1	P35817	686 aa		4.33	□□□□□ -1.72
PUT3	YKL015W	TIF4632	P39936	914 aa	Known RBP	4.33	□□□□□ -1.72
PUT3	YKL015W	SSK2	P53599	1579 aa		4.32	□□□□□ -1.72
PUT3	YKL015W	AI2	P03876	854 aa		4.32	□□□□□ -1.72
PUT3	YKL015W	ATG2	P53855	1592 aa		4.28	□□□□□ -1.72
PUT3	YKL015W	BPT1	P14772	1559 aa		4.27	□□□□□ -1.73
PUT3	YKL015W	SIN3	P22579	1536 aa		4.27	□□□□□ -1.73
PUT3	YKL015W	TGL3	P40308	642 aa		4.27	□□□□□ -1.73
PUT3	YKL015W	PSD2	P53037	1138 aa	Known RBP	4.26	□□□□□ -1.73
PUT3	YKL015W	XRN1	P22147	1528 aa	Known RBP	4.23	□□□□□ -1.73
PUT3	YKL015W	YCF1	P39109	1515 aa	Known RBP	4.22	□□□□□ -1.73
PUT3	YKL015W	CST9	Q06032	482 aa		4.21	□□□□□ -1.74
PUT3	YKL015W	MGA2	P40578	1113 aa		4.21	□□□□□ -1.74
PUT3	YKL015W	MRM1	P25270	412 aa		4.19	□□□□□ -1.74
PUT3	YKL015W	MET5	P47169	1442 aa		4.19	□□□□□ -1.74
PUT3	YKL015W	MYO2	P19524	1574 aa	Known RBP	4.18	□□□□□ -1.74
PUT3	YKL015W	GTT3	P39996	337 aa		4.17	□□□□□ -1.74
PUT3	YKL015W	LTE1	P07866	1435 aa		4.15	□□□□□ -1.75
PUT3	YKL015W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
PUT3	YKL015W	MIF2	P35201	549 aa		4.14	□□□□□ -1.75
PUT3	YKL015W	PIB1	Q06651	286 aa		4.14	□□□□□ -1.75
PUT3	YKL015W	MST1	P07236	462 aa		4.12	□□□□□ -1.75
PUT3	YKL015W	UBP9	P39967	754 aa		4.12	□□□□□ -1.75
PUT3	YKL015W	ESP1	Q03018	1630 aa		4.12	□□□□□ -1.75
PUT3	YKL015W	BUD31	P25337	157 aa	Predicted RBP	4.12	□□□□□ -1.75
PUT3	YKL015W	YAP5	P40574	245 aa		4.11	□□□□□ -1.75
PUT3	YKL015W	YOR238W	Q08634	303 aa		4.11	□□□□□ -1.75
PUT3	YKL015W	YPK9	Q12697	1472 aa		4.11	□□□□□ -1.75
PUT3	YKL015W	RCR1	P38212	213 aa		4.1	□□□□□ -1.75
PUT3	YKL015W	RPO31	P04051	1460 aa		4.1	□□□□□ -1.75
PUT3	YKL015W	WSC3	Q12215	556 aa		4.09	□□□□□ -1.75
PUT3	YKL015W	RTG3	P38165	486 aa		4.09	□□□□□ -1.75
PUT3	YKL015W	SSN2	P38931	1420 aa		4.09	□□□□□ -1.76
PUT3	YKL015W	CDC25	P04821	1589 aa		4.09	□□□□□ -1.76
PUT3	YKL015W	VPS29	P38759	282 aa		4.08	□□□□□ -1.76
PUT3	YKL015W	ESC1	Q03661	1658 aa	Known RBP	4.08	□□□□□ -1.76
PUT3	YKL015W	RKR1	Q04781	1562 aa		4.08	□□□□□ -1.76
PUT3	YKL015W	SCC2	Q04002	1493 aa		4.07	□□□□□ -1.76
PUT3	YKL015W	RPA190	P10964	1664 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 43 ms