RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W MTC1P47018 478 aaKnown RBP14.2□□□□□ -0.14
VMA16YHR026W DRS1P32892 752 aaKnown RBP14.12□□□□□ -0.15
VMA16YHR026W INO80P53115 1489 aa12.16□□□□□ -0.46
VMA16YHR026W MON2P48563 1636 aaPredicted RBP12.13□□□□□ -0.47
VMA16YHR026W BFR2Q06631 534 aaKnown RBP12.11□□□□□ -0.47
VMA16YHR026W DIP2Q12220 943 aaPredicted RBP12.07□□□□□ -0.48
VMA16YHR026W FAP1P53971 965 aa11.98□□□□□ -0.49
VMA16YHR026W AVT3P36062 692 aa11.81□□□□□ -0.52
VMA16YHR026W ISW2Q08773 1120 aa11.58□□□□□ -0.56
VMA16YHR026W DNA2P38859 1522 aa11.57□□□□□ -0.56
VMA16YHR026W PRI1P10363 409 aa11.51□□□□□ -0.57
VMA16YHR026W RPG1P38249 964 aaKnown RBP11.49□□□□□ -0.57
VMA16YHR026W RSE1Q04693 1361 aaKnown RBP11.41□□□□□ -0.58
VMA16YHR026W SWR1Q05471 1514 aa11.41□□□□□ -0.58
VMA16YHR026W AAD16Q02895 342 aa11.35□□□□□ -0.59
VMA16YHR026W KOG1P38873 1557 aa11.34□□□□□ -0.59
VMA16YHR026W PRY3P47033 881 aa11.21□□□□□ -0.61
VMA16YHR026W TFA1P36100 482 aa11.18□□□□□ -0.62
VMA16YHR026W TCB3Q03640 1545 aaKnown RBP11.17□□□□□ -0.62
VMA16YHR026W TY1B-DR4Q07793 1604 aa11.14□□□□□ -0.63
VMA16YHR026W RPL17AP05740 184 aaKnown RBP11.05□□□□□ -0.64
VMA16YHR026W RPL17BP46990 184 aaKnown RBP11.05□□□□□ -0.64
VMA16YHR026W TSR3Q12094 313 aaKnown RBP11.01□□□□□ -0.65
VMA16YHR026W REB1P21538 810 aa10.92□□□□□ -0.66
VMA16YHR026W SGS1P35187 1447 aa10.79□□□□□ -0.68
VMA16YHR026W SPA2P23201 1466 aaKnown RBP10.75□□□□□ -0.69
VMA16YHR026W SPT6P23615 1451 aaKnown RBP10.71□□□□□ -0.69
VMA16YHR026W HSL1P34244 1518 aa10.7□□□□□ -0.7
VMA16YHR026W ECM5Q03214 1411 aa10.66□□□□□ -0.7
VMA16YHR026W YCK3P39962 524 aa10.58□□□□□ -0.72
VMA16YHR026W SPT21P35209 758 aa10.57□□□□□ -0.72
VMA16YHR026W MRPL32P25348 183 aa10.51□□□□□ -0.73
VMA16YHR026W BUD4P47136 1447 aa10.5□□□□□ -0.73
VMA16YHR026W THO2P53552 1597 aaKnown RBP10.48□□□□□ -0.73
VMA16YHR026W HAA1Q12753 694 aaKnown RBP10.46□□□□□ -0.73
VMA16YHR026W HIR3P47171 1648 aa10.45□□□□□ -0.74
VMA16YHR026W MDS3P53094 1487 aa10.42□□□□□ -0.74
VMA16YHR026W RIM101P33400 625 aa10.37□□□□□ -0.75
VMA16YHR026W REV3P14284 1504 aa10.33□□□□□ -0.76
VMA16YHR026W YKR023WP36119 530 aaKnown RBP10.3□□□□□ -0.76
VMA16YHR026W PEP1P32319 1579 aa10.26□□□□□ -0.77
VMA16YHR026W XRN1P22147 1528 aaKnown RBP10.22□□□□□ -0.77
VMA16YHR026W BPT1P14772 1559 aa10.18□□□□□ -0.78
VMA16YHR026W HOP09932 586 aa10.16□□□□□ -0.78
VMA16YHR026W CDC27P38042 758 aa10.16□□□□□ -0.78
VMA16YHR026W ATG2P53855 1592 aa10.14□□□□□ -0.79
VMA16YHR026W DCD1P06773 312 aa10.12□□□□□ -0.79
VMA16YHR026W OXP1P28273 1286 aa10.1□□□□□ -0.79
VMA16YHR026W TFC8Q12308 588 aa10.08□□□□□ -0.8
VMA16YHR026W MIF2P35201 549 aa10.05□□□□□ -0.8
VMA16YHR026W PTP3P40048 928 aa10.01□□□□□ -0.81
VMA16YHR026W YCF1P39109 1515 aaKnown RBP10□□□□□ -0.81
VMA16YHR026W YAH1Q12184 172 aaKnown RBP9.99□□□□□ -0.81
VMA16YHR026W SKI3P17883 1432 aaKnown RBP9.97□□□□□ -0.81
VMA16YHR026W YIL055CP40523 627 aaKnown RBP9.95□□□□□ -0.82
VMA16YHR026W SSK2P53599 1579 aa9.92□□□□□ -0.82
VMA16YHR026W TAF2P23255 1407 aa9.91□□□□□ -0.82
VMA16YHR026W SSP1P38871 571 aa9.84□□□□□ -0.83
VMA16YHR026W SIN3P22579 1536 aa9.82□□□□□ -0.84
VMA16YHR026W YGL015CP33199 130 aa9.82□□□□□ -0.84
VMA16YHR026W UFD4P33202 1483 aa9.81□□□□□ -0.84
VMA16YHR026W BCH2P36122 765 aa9.8□□□□□ -0.84
VMA16YHR026W MET5P47169 1442 aa9.78□□□□□ -0.84
VMA16YHR026W RSM7P47150 247 aa9.77□□□□□ -0.85
VMA16YHR026W YLR271WQ06152 274 aa9.77□□□□□ -0.85
VMA16YHR026W MAP2P38174 421 aaKnown RBP9.75□□□□□ -0.85
VMA16YHR026W MYO2P19524 1574 aaKnown RBP9.74□□□□□ -0.85
VMA16YHR026W LTE1P07866 1435 aa9.73□□□□□ -0.85
VMA16YHR026W SSN2P38931 1420 aa9.73□□□□□ -0.85
VMA16YHR026W ESP1Q03018 1630 aa9.72□□□□□ -0.85
VMA16YHR026W SCY1P53009 804 aa9.71□□□□□ -0.86
VMA16YHR026W CDC25P04821 1589 aa9.69□□□□□ -0.86
VMA16YHR026W CHD1P32657 1468 aa9.69□□□□□ -0.86
VMA16YHR026W DNF1P32660 1571 aa9.68□□□□□ -0.86
VMA16YHR026W YFR006WP43590 535 aa9.68□□□□□ -0.86
VMA16YHR026W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.68□□□□□ -0.86not detected
VMA16YHR026W UBP10P53874 792 aaPredicted RBP9.67□□□□□ -0.86
VMA16YHR026W SCC2Q04002 1493 aa9.66□□□□□ -0.86
VMA16YHR026W ABP1P15891 592 aaKnown RBP9.65□□□□□ -0.86
VMA16YHR026W BNI1P41832 1953 aa9.64□□□□□ -0.87
VMA16YHR026W ESC1Q03661 1658 aaKnown RBP9.64□□□□□ -0.87
VMA16YHR026W AI2P03876 854 aa9.63□□□□□ -0.87
VMA16YHR026W RQC2Q12532 1038 aaKnown RBP9.63□□□□□ -0.87
VMA16YHR026W YPK9Q12697 1472 aa9.63□□□□□ -0.87
VMA16YHR026W RPA190P10964 1664 aaKnown RBP9.63□□□□□ -0.87
VMA16YHR026W EPS1P40557 701 aa9.62□□□□□ -0.87
VMA16YHR026W ITT1Q04638 464 aa9.62□□□□□ -0.87
VMA16YHR026W RPO31P04051 1460 aa9.6□□□□□ -0.87
VMA16YHR026W RKR1Q04781 1562 aa9.6□□□□□ -0.87
VMA16YHR026W GEA2P39993 1459 aaKnown RBP9.58□□□□□ -0.88
VMA16YHR026W PAN1P32521 1480 aa9.57□□□□□ -0.88
VMA16YHR026W BBC1P47068 1157 aa9.56□□□□□ -0.88
VMA16YHR026W BDF1P35817 686 aa9.55□□□□□ -0.88
VMA16YHR026W TY1B-BRQ12193 1756 aa9.53□□□□□ -0.88
VMA16YHR026W TY1B-GR3Q12316 1755 aa9.53□□□□□ -0.88
VMA16YHR026W TY1B-ORQ92393 1755 aa9.53□□□□□ -0.88
VMA16YHR026W TY2B-LR1P0C2J3 1770 aa9.52□□□□□ -0.88
VMA16YHR026W TY2B-FP0CX63 1770 aa9.52□□□□□ -0.88
VMA16YHR026W TY2B-GR2P0CX64 1770 aa9.52□□□□□ -0.88
VMA16YHR026W TY2B-CP25384 1770 aa9.52□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms