RNA–Protein interactions for RNA: YFR056C

YFR056C, Transcript of Dubious open reading frame, yeastyeast

Gene YFR056C, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFR056CYFR056C FAP1P53971 965 aa10.77□□□□□ -0.69
YFR056CYFR056C MTC1P47018 478 aaKnown RBP10.21□□□□□ -0.77
YFR056CYFR056C PRY3P47033 881 aa10.2□□□□□ -0.78
YFR056CYFR056C YCK3P39962 524 aa9.74□□□□□ -0.85
YFR056CYFR056C AAD16Q02895 342 aa9.5□□□□□ -0.89
YFR056CYFR056C PRI1P10363 409 aa9.41□□□□□ -0.9
YFR056CYFR056C HAA1Q12753 694 aaKnown RBP9.41□□□□□ -0.9
YFR056CYFR056C DRS1P32892 752 aaKnown RBP9.36□□□□□ -0.91
YFR056CYFR056C TSR3Q12094 313 aaKnown RBP8.87□□□□□ -0.99
YFR056CYFR056C RPG1P38249 964 aaKnown RBP8.75□□□□□ -1.01
YFR056CYFR056C ISW2Q08773 1120 aa8.7□□□□□ -1.02
YFR056CYFR056C YGL015CP33199 130 aa8.46□□□□□ -1.06
YFR056CYFR056C MRPL32P25348 183 aa8.43□□□□□ -1.06
YFR056CYFR056C BUD31P25337 157 aaPredicted RBP8.39□□□□□ -1.07
YFR056CYFR056C DIP2Q12220 943 aaPredicted RBP8.17□□□□□ -1.1
YFR056CYFR056C RSE1Q04693 1361 aaKnown RBP7.88□□□□□ -1.15
YFR056CYFR056C CDC27P38042 758 aa7.88□□□□□ -1.15
YFR056CYFR056C SIS1P25294 352 aaKnown RBP7.84□□□□□ -1.15
YFR056CYFR056C AVT3P36062 692 aa7.84□□□□□ -1.15
YFR056CYFR056C BFR2Q06631 534 aaKnown RBP7.84□□□□□ -1.15
YFR056CYFR056C MAP2P38174 421 aaKnown RBP7.76□□□□□ -1.17
YFR056CYFR056C REB1P21538 810 aa7.68□□□□□ -1.18
YFR056CYFR056C UBP10P53874 792 aaPredicted RBP7.67□□□□□ -1.18
YFR056CYFR056C RPL17AP05740 184 aaKnown RBP7.64□□□□□ -1.19
YFR056CYFR056C RPL17BP46990 184 aaKnown RBP7.64□□□□□ -1.19
YFR056CYFR056C UBP9P39967 754 aa7.52□□□□□ -1.21
YFR056CYFR056C YKR023WP36119 530 aaKnown RBP7.51□□□□□ -1.21
YFR056CYFR056C DCD1P06773 312 aa7.42□□□□□ -1.22
YFR056CYFR056C TGL3P40308 642 aa7.38□□□□□ -1.23
YFR056CYFR056C HOP09932 586 aa7.36□□□□□ -1.23
YFR056CYFR056C TIF4632P39936 914 aaKnown RBP7.34□□□□□ -1.23
YFR056CYFR056C SCY1P53009 804 aa7.33□□□□□ -1.24
YFR056CYFR056C TFC8Q12308 588 aa7.31□□□□□ -1.24
YFR056CYFR056C SLX5P32828 619 aaKnown RBP7.26□□□□□ -1.25
YFR056CYFR056C SPT21P35209 758 aa7.23□□□□□ -1.25
YFR056CYFR056C YBL029C-AQ3E756 94 aa7.09□□□□□ -1.27
YFR056CYFR056C BCH2P36122 765 aa7.04□□□□□ -1.28
YFR056CYFR056C RIM101P33400 625 aa7.01□□□□□ -1.29
YFR056CYFR056C MST1P07236 462 aa6.95□□□□□ -1.3
YFR056CYFR056C VNX1P42839 908 aa6.93□□□□□ -1.3
YFR056CYFR056C TFA1P36100 482 aa6.9□□□□□ -1.3
YFR056CYFR056C AIR2Q12476 344 aaKnown RBP6.88□□□□□ -1.31
YFR056CYFR056C SPP1Q03012 353 aa6.82□□□□□ -1.32
YFR056CYFR056C YOR238WQ08634 303 aa6.81□□□□□ -1.32
YFR056CYFR056C YJL171CP46992 396 aa6.8□□□□□ -1.32
YFR056CYFR056C YIL055CP40523 627 aaKnown RBP6.77□□□□□ -1.33
YFR056CYFR056C OXP1P28273 1286 aa6.76□□□□□ -1.33
YFR056CYFR056C BDF1P35817 686 aa6.76□□□□□ -1.33
YFR056CYFR056C FKH1P40466 484 aa6.76□□□□□ -1.33
YFR056CYFR056C WSC3Q12215 556 aa6.76□□□□□ -1.33
YFR056CYFR056C PTP3P40048 928 aa6.75□□□□□ -1.33
YFR056CYFR056C EPS1P40557 701 aa6.73□□□□□ -1.33
YFR056CYFR056C YAH1Q12184 172 aaKnown RBP6.66□□□□□ -1.34
YFR056CYFR056C TIF11P38912 153 aaKnown RBP6.65□□□□□ -1.34
YFR056CYFR056C RSM7P47150 247 aa6.62□□□□□ -1.35
YFR056CYFR056C BBC1P47068 1157 aa6.6□□□□□ -1.35
YFR056CYFR056C BMT6Q12291 365 aa6.6□□□□□ -1.35
YFR056CYFR056C NSR1P27476 414 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
YFR056CYFR056C LDB19Q12502 818 aa6.59□□□□□ -1.35
YFR056CYFR056C AI2P03876 854 aa6.55□□□□□ -1.36
YFR056CYFR056C YAP5P40574 245 aa6.55□□□□□ -1.36
YFR056CYFR056C IOC2Q12072 812 aa6.55□□□□□ -1.36
YFR056CYFR056C ULI1P43604 169 aa6.5□□□□□ -1.37
YFR056CYFR056C YLR271WQ06152 274 aa6.49□□□□□ -1.37
YFR056CYFR056C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
YFR056CYFR056C SSP1P38871 571 aa6.47□□□□□ -1.37
YFR056CYFR056C GTT3P39996 337 aa6.43□□□□□ -1.38
YFR056CYFR056C PSD2P53037 1138 aaKnown RBP6.38□□□□□ -1.39
YFR056CYFR056C RGA2Q06407 1009 aa6.36□□□□□ -1.39
YFR056CYFR056C PIB1Q06651 286 aa6.35□□□□□ -1.39
YFR056CYFR056C RTG1P32607 177 aa6.33□□□□□ -1.4
YFR056CYFR056C MRM1P25270 412 aa6.32□□□□□ -1.4
YFR056CYFR056C MGA2P40578 1113 aa6.31□□□□□ -1.4
YFR056CYFR056C NCR1Q12200 1170 aa6.31□□□□□ -1.4
YFR056CYFR056C CST9Q06032 482 aa6.27□□□□□ -1.41
YFR056CYFR056C TRP5P00931 707 aaKnown RBP6.25□□□□□ -1.41
YFR056CYFR056C BCK2P33306 851 aa6.24□□□□□ -1.41
YFR056CYFR056C RTG3P38165 486 aa6.22□□□□□ -1.41
YFR056CYFR056C EAP1P36041 632 aaKnown RBP6.2□□□□□ -1.42
YFR056CYFR056C SET4P42948 560 aa6.2□□□□□ -1.42
YFR056CYFR056C MSB4Q12317 492 aa6.2□□□□□ -1.42
YFR056CYFR056C YNL035CP53962 389 aaKnown RBP6.18□□□□□ -1.42
YFR056CYFR056C SEC61P32915 480 aa6.17□□□□□ -1.42
YFR056CYFR056C YMR1P47147 688 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
YFR056CYFR056C YOL036WQ08206 761 aa6.17□□□□□ -1.42
YFR056CYFR056C DBP1P24784 617 aaKnown RBP6.14□□□□□ -1.43
YFR056CYFR056C SAP30P38429 201 aa6.14□□□□□ -1.43
YFR056CYFR056C VPS29P38759 282 aa6.14□□□□□ -1.43
YFR056CYFR056C YFR006WP43590 535 aa6.11□□□□□ -1.43
YFR056CYFR056C CHL1P22516 861 aaPredicted RBP6.09□□□□□ -1.43
YFR056CYFR056C RCR1P38212 213 aa6.09□□□□□ -1.43
YFR056CYFR056C STS1P38637 319 aa6.07□□□□□ -1.44
YFR056CYFR056C RGA1P39083 1007 aa6.05□□□□□ -1.44
YFR056CYFR056C VMA1P17255 1071 aaKnown RBP6.04□□□□□ -1.44
YFR056CYFR056C PRE3P38624 215 aa6.04□□□□□ -1.44
YFR056CYFR056C DAN4P47179 1161 aa6.04□□□□□ -1.44
YFR056CYFR056C TFG1P41895 735 aaPredicted RBP6.03□□□□□ -1.44
YFR056CYFR056C XDJ1P39102 459 aa6.02□□□□□ -1.45
YFR056CYFR056C VRP1P37370 817 aa6□□□□□ -1.45
YFR056CYFR056C YDR344CQ05510 147 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms