Protein–RNA interactions for Protein: P38624

PRE3, Proteasome subunit beta type-1, yeastyeast

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRE3P38624 YML009W-BYML009W-B 477 nt16.58■□□□□ 0.24
PRE3P38624 NSR1YGR159C 1245 nt16.55■□□□□ 0.24
PRE3P38624 NOP1YDL014W 984 nt16.27■□□□□ 0.2
PRE3P38624 YGR139WYGR139W 339 nt15.4■□□□□ 0.06
PRE3P38624 YKL036CYKL036C 393 nt14.94□□□□□ -0.02
PRE3P38624 VAR1Q0140 1197 nt14.85□□□□□ -0.03
PRE3P38624 MDJ1YFL016C 1536 nt14.51□□□□□ -0.09
PRE3P38624 Q0297Q0297 156 nt14.16□□□□□ -0.14
PRE3P38624 SRX1YKL086W 384 nt14.13□□□□□ -0.15
PRE3P38624 YJL027CYJL027C 417 nt13.94□□□□□ -0.18
PRE3P38624 YDR509WYDR509W 348 nt13.92□□□□□ -0.18
PRE3P38624 NME1NME1 340 nt13.65□□□□□ -0.22
PRE3P38624 CSM2YIL132C 642 nt13.61□□□□□ -0.23
PRE3P38624 Q0017Q0017 162 nt13.61□□□□□ -0.23
PRE3P38624 PAM17YKR065C 594 nt13.56□□□□□ -0.24
PRE3P38624 SCS3YGL126W 1143 nt13.52□□□□□ -0.25
PRE3P38624 Q0142Q0142 177 nt13.49□□□□□ -0.25
PRE3P38624 PAU21YOR394W 495 nt13.49□□□□□ -0.25
PRE3P38624 PAU22YPL282C 495 nt13.49□□□□□ -0.25
PRE3P38624 Q0144Q0144 330 nt13.41□□□□□ -0.26
PRE3P38624 YCR051WYCR051W 669 nt13.38□□□□□ -0.27
PRE3P38624 ARO7YPR060C 771 nt13.38□□□□□ -0.27
PRE3P38624 MOT3YMR070W 1473 nt13.33□□□□□ -0.28
PRE3P38624 BMT5YIL096C 1011 nt13.19□□□□□ -0.3
PRE3P38624 Q0182Q0182 405 nt13.18□□□□□ -0.3
PRE3P38624 REG2YBR050C 1017 nt13.16□□□□□ -0.3
PRE3P38624 BUR6YER159C 429 nt13.15□□□□□ -0.3
PRE3P38624 SEM1YDR363W-A 270 nt13.13□□□□□ -0.31
PRE3P38624 Q0255Q0255 1419 nt12.91□□□□□ -0.34
PRE3P38624 AI5_BETAQ0075 1065 nt12.88□□□□□ -0.35
PRE3P38624 YOL085CYOL085C 342 nt12.88□□□□□ -0.35
PRE3P38624 Q0010Q0010 387 nt12.84□□□□□ -0.35
PRE3P38624 DBP2YNL112W 1641 nt12.82□□□□□ -0.36
PRE3P38624 SSA3YBL075C 1950 nt12.81□□□□□ -0.36
PRE3P38624 YOR169CYOR169C 465 nt12.79□□□□□ -0.36
PRE3P38624 YIR018C-AYIR018C-A 138 nt12.77□□□□□ -0.37
PRE3P38624 YGL188CYGL188C 174 nt12.76□□□□□ -0.37
PRE3P38624 TRN1tP(UGG)A 72 nt12.73□□□□□ -0.37
PRE3P38624 SUF9tP(UGG)F 72 nt12.73□□□□□ -0.37
PRE3P38624 SUF8tP(UGG)H 72 nt12.73□□□□□ -0.37
PRE3P38624 tP(UGG)LtP(UGG)L 72 nt12.73□□□□□ -0.37
PRE3P38624 SUF7tP(UGG)M 72 nt12.73□□□□□ -0.37
PRE3P38624 tP(UGG)N1tP(UGG)N1 72 nt12.73□□□□□ -0.37
PRE3P38624 tP(UGG)N2tP(UGG)N2 72 nt12.73□□□□□ -0.37
PRE3P38624 tP(UGG)O1tP(UGG)O1 72 nt12.73□□□□□ -0.37
PRE3P38624 SUF11tP(UGG)O2 72 nt12.73□□□□□ -0.37
PRE3P38624 SRN2YLR119W 642 nt12.73□□□□□ -0.37
PRE3P38624 RPP1BYDL130W 321 nt12.7□□□□□ -0.38
PRE3P38624 AI3Q0060 1248 nt12.7□□□□□ -0.38
PRE3P38624 PKP1YIL042C 1185 nt12.6□□□□□ -0.39
PRE3P38624 YCR099CYCR099C 468 nt12.59□□□□□ -0.39
PRE3P38624 CCC1YLR220W 969 nt12.56□□□□□ -0.4
PRE3P38624 ARP10YDR106W 855 nt12.51□□□□□ -0.41
PRE3P38624 ATP6Q0085 780 nt12.51□□□□□ -0.41
PRE3P38624 YBR190WYBR190W 312 nt12.51□□□□□ -0.41
PRE3P38624 PET20YPL159C 762 nt12.4□□□□□ -0.42
PRE3P38624 AIR1YIL079C 1083 nt12.39□□□□□ -0.43
PRE3P38624 ARA2YMR041C 1008 nt12.34□□□□□ -0.43
PRE3P38624 RVS167YDR388W 1449 nt12.3□□□□□ -0.44
PRE3P38624 RTC3YHR087W 336 nt12.21□□□□□ -0.45
PRE3P38624 YNR068CYNR068C 819 nt12.18□□□□□ -0.46
PRE3P38624 SCJ1YMR214W 1134 nt12.15□□□□□ -0.46
PRE3P38624 snR78snR78 87 nt12.14□□□□□ -0.47
PRE3P38624 KTR3YBR205W 1215 nt12.14□□□□□ -0.47
PRE3P38624 ABZ2YMR289W 1125 nt12.13□□□□□ -0.47
PRE3P38624 ATS1YAL020C 1002 nt12.12□□□□□ -0.47
PRE3P38624 SCR1SCR1 522 nt12.1□□□□□ -0.47
PRE3P38624 YLR122CYLR122C 378 nt12.07□□□□□ -0.48
PRE3P38624 PET122YER153C 765 nt12.05□□□□□ -0.48
PRE3P38624 UTP6YDR449C 1323 nt12.05□□□□□ -0.48
PRE3P38624 NEM1YHR004C 1341 nt12.05□□□□□ -0.48
PRE3P38624 tP(UGG)O3tP(UGG)O3 72 nt12.04□□□□□ -0.48
PRE3P38624 PHO92YDR374C 921 nt12.03□□□□□ -0.48
PRE3P38624 SKG1YKR100C 1068 nt12.01□□□□□ -0.49
PRE3P38624 YPL168WYPL168W 1293 nt12.01□□□□□ -0.49
PRE3P38624 YEL009C-AYEL009C-A 408 nt11.98□□□□□ -0.49
PRE3P38624 YHL044WYHL044W 708 nt11.89□□□□□ -0.51
PRE3P38624 AST1YBL069W 1290 nt11.87□□□□□ -0.51
PRE3P38624 STD1YOR047C 1335 nt11.8□□□□□ -0.52
PRE3P38624 SHR5YOL110W 714 nt11.79□□□□□ -0.52
PRE3P38624 RPM1RPM1 483 nt11.76□□□□□ -0.53
PRE3P38624 URE2YNL229C 1065 nt11.75□□□□□ -0.53
PRE3P38624 RRN5YLR141W 1092 nt11.72□□□□□ -0.53
PRE3P38624 YDJ1YNL064C 1230 nt11.71□□□□□ -0.53
PRE3P38624 YAL016C-BYAL016C-B 186 nt11.69□□□□□ -0.54
PRE3P38624 PEX27YOR193W 1131 nt11.69□□□□□ -0.54
PRE3P38624 TOM20YGR082W 552 nt11.67□□□□□ -0.54
PRE3P38624 FAR3YMR052W 615 nt11.63□□□□□ -0.55
PRE3P38624 YMR119W-AYMR119W-A 375 nt11.63□□□□□ -0.55
PRE3P38624 YPL071CYPL071C 471 nt11.61□□□□□ -0.55
PRE3P38624 GTT3YEL017W 1014 nt11.6□□□□□ -0.55
PRE3P38624 FTR1YER145C 1215 nt11.57□□□□□ -0.56
PRE3P38624 HMT1YBR034C 1047 nt11.57□□□□□ -0.56
PRE3P38624 YDR008CYDR008C 351 nt11.56□□□□□ -0.56
PRE3P38624 RSB1YOR049C 1065 nt11.53□□□□□ -0.56
PRE3P38624 YER088W-BYER088W-B 147 nt11.49□□□□□ -0.57
PRE3P38624 PUS9YDL036C 1389 nt11.46□□□□□ -0.57
PRE3P38624 LCP5YER127W 1074 nt11.44□□□□□ -0.58
PRE3P38624 LSM12YHR121W 564 nt11.44□□□□□ -0.58
PRE3P38624 MET8YBR213W 825 nt11.44□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms