Protein–RNA interactions for Protein: P39083

RGA1, Rho-type GTPase-activating protein 1, yeastyeast

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RGA1P39083 YML009W-BYML009W-B 477 nt19.7■□□□□ 0.74
RGA1P39083 NSR1YGR159C 1245 nt19.54■□□□□ 0.72
RGA1P39083 NOP1YDL014W 984 nt19.18■□□□□ 0.66
RGA1P39083 YKL036CYKL036C 393 nt17.77■□□□□ 0.44
RGA1P39083 MDJ1YFL016C 1536 nt17.29■□□□□ 0.36
RGA1P39083 Q0297Q0297 156 nt16.83■□□□□ 0.28
RGA1P39083 SRX1YKL086W 384 nt16.78■□□□□ 0.28
RGA1P39083 YJL027CYJL027C 417 nt16.6■□□□□ 0.25
RGA1P39083 SCS3YGL126W 1143 nt16.21■□□□□ 0.19
RGA1P39083 YCR051WYCR051W 669 nt15.92■□□□□ 0.14
RGA1P39083 YOL085CYOL085C 342 nt15.41■□□□□ 0.06
RGA1P39083 DBP2YNL112W 1641 nt15.35■□□□□ 0.05
RGA1P39083 PKP1YIL042C 1185 nt15.17■□□□□ 0.02
RGA1P39083 TRN1tP(UGG)A 72 nt15.13■□□□□ 0.01
RGA1P39083 SUF9tP(UGG)F 72 nt15.13■□□□□ 0.01
RGA1P39083 SUF8tP(UGG)H 72 nt15.13■□□□□ 0.01
RGA1P39083 tP(UGG)LtP(UGG)L 72 nt15.13■□□□□ 0.01
RGA1P39083 SUF7tP(UGG)M 72 nt15.13■□□□□ 0.01
RGA1P39083 tP(UGG)N1tP(UGG)N1 72 nt15.13■□□□□ 0.01
RGA1P39083 tP(UGG)N2tP(UGG)N2 72 nt15.13■□□□□ 0.01
RGA1P39083 tP(UGG)O1tP(UGG)O1 72 nt15.13■□□□□ 0.01
RGA1P39083 SUF11tP(UGG)O2 72 nt15.13■□□□□ 0.01
RGA1P39083 RPP1BYDL130W 321 nt15.1■□□□□ 0.01
RGA1P39083 CCC1YLR220W 969 nt14.98□□□□□ -0.01
RGA1P39083 YBR190WYBR190W 312 nt14.72□□□□□ -0.05
RGA1P39083 ATS1YAL020C 1002 nt14.53□□□□□ -0.08
RGA1P39083 SCJ1YMR214W 1134 nt14.44□□□□□ -0.1
RGA1P39083 PET122YER153C 765 nt14.42□□□□□ -0.1
RGA1P39083 RVS167YDR388W 1449 nt14.4□□□□□ -0.1
RGA1P39083 RTC3YHR087W 336 nt14.39□□□□□ -0.11
RGA1P39083 tP(UGG)O3tP(UGG)O3 72 nt14.34□□□□□ -0.11
RGA1P39083 SSA3YBL075C 1950 nt14.27□□□□□ -0.12
RGA1P39083 SCR1SCR1 522 nt14.27□□□□□ -0.13
RGA1P39083 VAR1Q0140 1197 nt14.17□□□□□ -0.14
RGA1P39083 RRN5YLR141W 1092 nt14.03□□□□□ -0.16
RGA1P39083 SHR5YOL110W 714 nt13.93□□□□□ -0.18
RGA1P39083 YDJ1YNL064C 1230 nt13.87□□□□□ -0.19
RGA1P39083 Q0182Q0182 405 nt13.77□□□□□ -0.21
RGA1P39083 YER088W-BYER088W-B 147 nt13.75□□□□□ -0.21
RGA1P39083 RSB1YOR049C 1065 nt13.73□□□□□ -0.21
RGA1P39083 MOT3YMR070W 1473 nt13.55□□□□□ -0.24
RGA1P39083 GAR1YHR089C 618 nt13.55□□□□□ -0.24
RGA1P39083 DEP1YAL013W 1218 nt13.53□□□□□ -0.24
RGA1P39083 URN1YPR152C 1398 nt13.5□□□□□ -0.25
RGA1P39083 PST2YDR032C 597 nt13.46□□□□□ -0.25
RGA1P39083 PUT4YOR348C 1884 nt13.33□□□□□ -0.27
RGA1P39083 YNL208WYNL208W 600 nt13.31□□□□□ -0.28
RGA1P39083 OPI9YLR338W 858 nt13.3□□□□□ -0.28
RGA1P39083 RPN10YHR200W 807 nt13.29□□□□□ -0.28
RGA1P39083 Q0017Q0017 162 nt13.22□□□□□ -0.29
RGA1P39083 SAH1YER043C 1350 nt13.2□□□□□ -0.3
RGA1P39083 ARE1YCR048W 1833 nt13.11□□□□□ -0.31
RGA1P39083 TIR1YER011W 765 nt13.09□□□□□ -0.31
RGA1P39083 SSA1YAL005C 1929 nt12.94□□□□□ -0.34
RGA1P39083 YKL097CYKL097C 411 nt12.93□□□□□ -0.34
RGA1P39083 YHR049C-AYHR049C-A 297 nt12.92□□□□□ -0.34
RGA1P39083 POA1YBR022W 534 nt12.92□□□□□ -0.34
RGA1P39083 PUN1YLR414C 792 nt12.9□□□□□ -0.34
RGA1P39083 SHU1YHL006C 453 nt12.89□□□□□ -0.35
RGA1P39083 YJR018WYJR018W 363 nt12.89□□□□□ -0.35
RGA1P39083 YGR139WYGR139W 339 nt12.76□□□□□ -0.37
RGA1P39083 SRB2YHR041C 633 nt12.76□□□□□ -0.37
RGA1P39083 PTC2YER089C 1395 nt12.75□□□□□ -0.37
RGA1P39083 YJR120WYJR120W 351 nt12.73□□□□□ -0.37
RGA1P39083 Q0142Q0142 177 nt12.72□□□□□ -0.37
RGA1P39083 YAL037C-BYAL037C-B 975 nt12.68□□□□□ -0.38
RGA1P39083 BUD23YCR047C 828 nt12.63□□□□□ -0.39
RGA1P39083 RPP2BYDR382W 333 nt12.63□□□□□ -0.39
RGA1P39083 BSC6YOL137W 1494 nt12.61□□□□□ -0.39
RGA1P39083 NAB2YGL122C 1578 nt12.56□□□□□ -0.4
RGA1P39083 WWM1YFL010C 636 nt12.54□□□□□ -0.4
RGA1P39083 NME1NME1 340 nt12.47□□□□□ -0.41
RGA1P39083 YGR021WYGR021W 873 nt12.46□□□□□ -0.41
RGA1P39083 YDR509WYDR509W 348 nt12.44□□□□□ -0.42
RGA1P39083 HOM6YJR139C 1080 nt12.44□□□□□ -0.42
RGA1P39083 YOR139CYOR139C 393 nt12.43□□□□□ -0.42
RGA1P39083 INM2YDR287W 879 nt12.42□□□□□ -0.42
RGA1P39083 DAL1YIR027C 1383 nt12.41□□□□□ -0.42
RGA1P39083 BDH2YAL061W 1254 nt12.4□□□□□ -0.42
RGA1P39083 MNP1YGL068W 585 nt12.39□□□□□ -0.43
RGA1P39083 FIS1YIL065C 468 nt12.39□□□□□ -0.43
RGA1P39083 FPR4YLR449W 1179 nt12.38□□□□□ -0.43
RGA1P39083 YFL021C-AYFL021C-A 855 nt12.31□□□□□ -0.44
RGA1P39083 YBL100CYBL100C 315 nt12.3□□□□□ -0.44
RGA1P39083 PHO4YFR034C 939 nt12.29□□□□□ -0.44
RGA1P39083 NVJ2YPR091C 2313 nt12.29□□□□□ -0.44
RGA1P39083 NPL3YDR432W 1245 nt12.27□□□□□ -0.45
RGA1P39083 LSM3YLR438C-A 270 nt12.26□□□□□ -0.45
RGA1P39083 RKM5YLR137W 1104 nt12.25□□□□□ -0.45
RGA1P39083 PAC11YDR488C 1602 nt12.23□□□□□ -0.45
RGA1P39083 FPS1YLL043W 2010 nt12.22□□□□□ -0.45
RGA1P39083 YOL037CYOL037C 354 nt12.19□□□□□ -0.46
RGA1P39083 FUN26YAL022C 1554 nt12.18□□□□□ -0.46
RGA1P39083 TRM9YML014W 840 nt12.17□□□□□ -0.46
RGA1P39083 CCT6YDR188W 1641 nt12.04□□□□□ -0.48
RGA1P39083 YPS1YLR120C 1710 nt12.03□□□□□ -0.48
RGA1P39083 SPT5YML010W 3192 nt12□□□□□ -0.49
RGA1P39083 Q0255Q0255 1419 nt11.97□□□□□ -0.49
RGA1P39083 YDR095CYDR095C 411 nt11.97□□□□□ -0.49
RGA1P39083 ALF1YNL148C 765 nt11.97□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms