Protein–RNA interactions for Protein: P17255

VMA1, V-type proton ATPase catalytic subunit A, yeastyeast

Known RBP Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA1P17255 YML009W-BYML009W-B 477 nt22.24■■□□□ 1.15
VMA1P17255 NSR1YGR159C 1245 nt22.01■■□□□ 1.11
VMA1P17255 NOP1YDL014W 984 nt21.63■■□□□ 1.05
VMA1P17255 YKL036CYKL036C 393 nt20■□□□□ 0.79
VMA1P17255 MDJ1YFL016C 1536 nt19.51■□□□□ 0.71
VMA1P17255 Q0297Q0297 156 nt18.93■□□□□ 0.62
VMA1P17255 SRX1YKL086W 384 nt18.88■□□□□ 0.61
VMA1P17255 YJL027CYJL027C 417 nt18.7■□□□□ 0.58
VMA1P17255 SCS3YGL126W 1143 nt18.23■□□□□ 0.51
VMA1P17255 YCR051WYCR051W 669 nt17.93■□□□□ 0.46
VMA1P17255 YOL085CYOL085C 342 nt17.31■□□□□ 0.36
VMA1P17255 DBP2YNL112W 1641 nt17.25■□□□□ 0.35
VMA1P17255 TRN1tP(UGG)A 72 nt17.06■□□□□ 0.32
VMA1P17255 SUF9tP(UGG)F 72 nt17.06■□□□□ 0.32
VMA1P17255 SUF8tP(UGG)H 72 nt17.06■□□□□ 0.32
VMA1P17255 tP(UGG)LtP(UGG)L 72 nt17.06■□□□□ 0.32
VMA1P17255 SUF7tP(UGG)M 72 nt17.06■□□□□ 0.32
VMA1P17255 tP(UGG)N1tP(UGG)N1 72 nt17.06■□□□□ 0.32
VMA1P17255 tP(UGG)N2tP(UGG)N2 72 nt17.06■□□□□ 0.32
VMA1P17255 tP(UGG)O1tP(UGG)O1 72 nt17.06■□□□□ 0.32
VMA1P17255 SUF11tP(UGG)O2 72 nt17.06■□□□□ 0.32
VMA1P17255 PKP1YIL042C 1185 nt17.05■□□□□ 0.32
VMA1P17255 RPP1BYDL130W 321 nt16.99■□□□□ 0.31
VMA1P17255 CCC1YLR220W 969 nt16.88■□□□□ 0.29
VMA1P17255 YGR139WYGR139W 339 nt16.79■□□□□ 0.28
VMA1P17255 YBR190WYBR190W 312 nt16.61■□□□□ 0.25
VMA1P17255 ATS1YAL020C 1002 nt16.31■□□□□ 0.2
VMA1P17255 RVS167YDR388W 1449 nt16.3■□□□□ 0.2
VMA1P17255 RTC3YHR087W 336 nt16.27■□□□□ 0.2
VMA1P17255 PET122YER153C 765 nt16.24■□□□□ 0.19
VMA1P17255 SCJ1YMR214W 1134 nt16.21■□□□□ 0.19
VMA1P17255 tP(UGG)O3tP(UGG)O3 72 nt16.14■□□□□ 0.17
VMA1P17255 SCR1SCR1 522 nt16.1■□□□□ 0.17
VMA1P17255 MOT3YMR070W 1473 nt15.76■□□□□ 0.11
VMA1P17255 RRN5YLR141W 1092 nt15.75■□□□□ 0.11
VMA1P17255 SHR5YOL110W 714 nt15.72■□□□□ 0.11
VMA1P17255 Q0182Q0182 405 nt15.64■□□□□ 0.09
VMA1P17255 YDJ1YNL064C 1230 nt15.61■□□□□ 0.09
VMA1P17255 RSB1YOR049C 1065 nt15.48■□□□□ 0.07
VMA1P17255 YER088W-BYER088W-B 147 nt15.45■□□□□ 0.06
VMA1P17255 NME1NME1 340 nt15.39■□□□□ 0.05
VMA1P17255 GAR1YHR089C 618 nt15.27■□□□□ 0.04
VMA1P17255 DEP1YAL013W 1218 nt15.25■□□□□ 0.03
VMA1P17255 URN1YPR152C 1398 nt15.24■□□□□ 0.03
VMA1P17255 PST2YDR032C 597 nt15.07■□□□□ 0
VMA1P17255 RPN10YHR200W 807 nt15.07■□□□□ 0
VMA1P17255 CSM2YIL132C 642 nt15.04■□□□□ -0
VMA1P17255 YNL208WYNL208W 600 nt15.02■□□□□ -0
VMA1P17255 PUT4YOR348C 1884 nt15.01□□□□□ -0.01
VMA1P17255 OPI9YLR338W 858 nt15□□□□□ -0.01
VMA1P17255 VAR1Q0140 1197 nt14.97□□□□□ -0.01
VMA1P17255 SAH1YER043C 1350 nt14.88□□□□□ -0.03
VMA1P17255 PAU21YOR394W 495 nt14.86□□□□□ -0.03
VMA1P17255 PAU22YPL282C 495 nt14.86□□□□□ -0.03
VMA1P17255 ARE1YCR048W 1833 nt14.76□□□□□ -0.05
VMA1P17255 TIR1YER011W 765 nt14.74□□□□□ -0.05
VMA1P17255 ARO7YPR060C 771 nt14.7□□□□□ -0.06
VMA1P17255 YHR049C-AYHR049C-A 297 nt14.63□□□□□ -0.07
VMA1P17255 PAM17YKR065C 594 nt14.62□□□□□ -0.07
VMA1P17255 YDR509WYDR509W 348 nt14.6□□□□□ -0.07
VMA1P17255 PUN1YLR414C 792 nt14.59□□□□□ -0.07
VMA1P17255 POA1YBR022W 534 nt14.56□□□□□ -0.08
VMA1P17255 YKL097CYKL097C 411 nt14.55□□□□□ -0.08
VMA1P17255 SSA1YAL005C 1929 nt14.54□□□□□ -0.08
VMA1P17255 YJR018WYJR018W 363 nt14.53□□□□□ -0.08
VMA1P17255 SHU1YHL006C 453 nt14.46□□□□□ -0.09
VMA1P17255 PTC2YER089C 1395 nt14.38□□□□□ -0.11
VMA1P17255 REG2YBR050C 1017 nt14.38□□□□□ -0.11
VMA1P17255 YJR120WYJR120W 351 nt14.31□□□□□ -0.12
VMA1P17255 SRB2YHR041C 633 nt14.3□□□□□ -0.12
VMA1P17255 BUD23YCR047C 828 nt14.29□□□□□ -0.12
VMA1P17255 RPP2BYDR382W 333 nt14.29□□□□□ -0.12
VMA1P17255 SSA3YBL075C 1950 nt14.26□□□□□ -0.13
VMA1P17255 BSC6YOL137W 1494 nt14.25□□□□□ -0.13
VMA1P17255 BUR6YER159C 429 nt14.2□□□□□ -0.14
VMA1P17255 YAL037C-BYAL037C-B 975 nt14.2□□□□□ -0.14
VMA1P17255 NAB2YGL122C 1578 nt14.17□□□□□ -0.14
VMA1P17255 BMT5YIL096C 1011 nt14.17□□□□□ -0.14
VMA1P17255 Q0144Q0144 330 nt14.11□□□□□ -0.15
VMA1P17255 WWM1YFL010C 636 nt14.1□□□□□ -0.15
VMA1P17255 YGR021WYGR021W 873 nt14.07□□□□□ -0.16
VMA1P17255 DAL1YIR027C 1383 nt14.02□□□□□ -0.17
VMA1P17255 FIS1YIL065C 468 nt14.02□□□□□ -0.17
VMA1P17255 INM2YDR287W 879 nt14□□□□□ -0.17
VMA1P17255 HOM6YJR139C 1080 nt14□□□□□ -0.17
VMA1P17255 FPR4YLR449W 1179 nt14□□□□□ -0.17
VMA1P17255 Q0010Q0010 387 nt13.99□□□□□ -0.17
VMA1P17255 BDH2YAL061W 1254 nt13.98□□□□□ -0.17
VMA1P17255 SEM1YDR363W-A 270 nt13.96□□□□□ -0.17
VMA1P17255 MNP1YGL068W 585 nt13.96□□□□□ -0.17
VMA1P17255 YOR139CYOR139C 393 nt13.93□□□□□ -0.18
VMA1P17255 YBL100CYBL100C 315 nt13.91□□□□□ -0.18
VMA1P17255 PHO4YFR034C 939 nt13.9□□□□□ -0.18
VMA1P17255 YFL021C-AYFL021C-A 855 nt13.89□□□□□ -0.19
VMA1P17255 YIR018C-AYIR018C-A 138 nt13.85□□□□□ -0.19
VMA1P17255 NPL3YDR432W 1245 nt13.84□□□□□ -0.19
VMA1P17255 SRN2YLR119W 642 nt13.82□□□□□ -0.2
VMA1P17255 RKM5YLR137W 1104 nt13.8□□□□□ -0.2
VMA1P17255 LSM3YLR438C-A 270 nt13.8□□□□□ -0.2
VMA1P17255 YOL037CYOL037C 354 nt13.77□□□□□ -0.21
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms