Protein–RNA interactions for Protein: P42839

VNX1, Low affinity vacuolar monovalent cation/H(+) antiporter, yeastyeast

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VNX1P42839 NSR1YGR159C 1245 nt18.31■□□□□ 0.52
VNX1P42839 YML009W-BYML009W-B 477 nt18.3■□□□□ 0.52
VNX1P42839 NOP1YDL014W 984 nt18.04■□□□□ 0.48
VNX1P42839 YKL036CYKL036C 393 nt17.04■□□□□ 0.32
VNX1P42839 VAR1Q0140 1197 nt16.68■□□□□ 0.26
VNX1P42839 YGR139WYGR139W 339 nt16.68■□□□□ 0.26
VNX1P42839 MDJ1YFL016C 1536 nt16.5■□□□□ 0.23
VNX1P42839 YJL027CYJL027C 417 nt15.96■□□□□ 0.15
VNX1P42839 Q0297Q0297 156 nt15.93■□□□□ 0.14
VNX1P42839 SRX1YKL086W 384 nt15.74■□□□□ 0.11
VNX1P42839 SCS3YGL126W 1143 nt15.7■□□□□ 0.1
VNX1P42839 YDR509WYDR509W 348 nt15.43■□□□□ 0.06
VNX1P42839 Q0017Q0017 162 nt15.36■□□□□ 0.05
VNX1P42839 Q0142Q0142 177 nt15.11■□□□□ 0.01
VNX1P42839 YCR051WYCR051W 669 nt14.94□□□□□ -0.02
VNX1P42839 Q0144Q0144 330 nt14.75□□□□□ -0.05
VNX1P42839 PAM17YKR065C 594 nt14.74□□□□□ -0.05
VNX1P42839 YOL085CYOL085C 342 nt14.72□□□□□ -0.05
VNX1P42839 CSM2YIL132C 642 nt14.69□□□□□ -0.06
VNX1P42839 PAU21YOR394W 495 nt14.62□□□□□ -0.07
VNX1P42839 PAU22YPL282C 495 nt14.62□□□□□ -0.07
VNX1P42839 NME1NME1 340 nt14.59□□□□□ -0.07
VNX1P42839 DBP2YNL112W 1641 nt14.59□□□□□ -0.07
VNX1P42839 SCJ1YMR214W 1134 nt14.54□□□□□ -0.08
VNX1P42839 ARO7YPR060C 771 nt14.49□□□□□ -0.09
VNX1P42839 SEM1YDR363W-A 270 nt14.43□□□□□ -0.1
VNX1P42839 BMT5YIL096C 1011 nt14.43□□□□□ -0.1
VNX1P42839 Q0255Q0255 1419 nt14.41□□□□□ -0.1
VNX1P42839 PKP1YIL042C 1185 nt14.4□□□□□ -0.1
VNX1P42839 BUR6YER159C 429 nt14.33□□□□□ -0.12
VNX1P42839 YOR169CYOR169C 465 nt14.3□□□□□ -0.12
VNX1P42839 RPP1BYDL130W 321 nt14.28□□□□□ -0.12
VNX1P42839 REG2YBR050C 1017 nt14.27□□□□□ -0.13
VNX1P42839 YGL188CYGL188C 174 nt14.22□□□□□ -0.13
VNX1P42839 AI5_BETAQ0075 1065 nt14.19□□□□□ -0.14
VNX1P42839 ATS1YAL020C 1002 nt14.17□□□□□ -0.14
VNX1P42839 TRN1tP(UGG)A 72 nt14.12□□□□□ -0.15
VNX1P42839 SUF9tP(UGG)F 72 nt14.12□□□□□ -0.15
VNX1P42839 SUF8tP(UGG)H 72 nt14.12□□□□□ -0.15
VNX1P42839 tP(UGG)LtP(UGG)L 72 nt14.12□□□□□ -0.15
VNX1P42839 SUF7tP(UGG)M 72 nt14.12□□□□□ -0.15
VNX1P42839 tP(UGG)N1tP(UGG)N1 72 nt14.12□□□□□ -0.15
VNX1P42839 tP(UGG)N2tP(UGG)N2 72 nt14.12□□□□□ -0.15
VNX1P42839 tP(UGG)O1tP(UGG)O1 72 nt14.12□□□□□ -0.15
VNX1P42839 SUF11tP(UGG)O2 72 nt14.12□□□□□ -0.15
VNX1P42839 YBR190WYBR190W 312 nt14.06□□□□□ -0.16
VNX1P42839 MOT3YMR070W 1473 nt14.04□□□□□ -0.16
VNX1P42839 AI3Q0060 1248 nt14.03□□□□□ -0.16
VNX1P42839 Q0010Q0010 387 nt13.99□□□□□ -0.17
VNX1P42839 CCC1YLR220W 969 nt13.95□□□□□ -0.18
VNX1P42839 YIR018C-AYIR018C-A 138 nt13.94□□□□□ -0.18
VNX1P42839 ATP6Q0085 780 nt13.9□□□□□ -0.18
VNX1P42839 YCR099CYCR099C 468 nt13.87□□□□□ -0.19
VNX1P42839 SRN2YLR119W 642 nt13.85□□□□□ -0.19
VNX1P42839 Q0182Q0182 405 nt13.76□□□□□ -0.21
VNX1P42839 RTC3YHR087W 336 nt13.7□□□□□ -0.22
VNX1P42839 AIR1YIL079C 1083 nt13.69□□□□□ -0.22
VNX1P42839 ARP10YDR106W 855 nt13.61□□□□□ -0.23
VNX1P42839 SCR1SCR1 522 nt13.58□□□□□ -0.24
VNX1P42839 PET122YER153C 765 nt13.56□□□□□ -0.24
VNX1P42839 PET20YPL159C 762 nt13.54□□□□□ -0.24
VNX1P42839 RVS167YDR388W 1449 nt13.48□□□□□ -0.25
VNX1P42839 KTR3YBR205W 1215 nt13.37□□□□□ -0.27
VNX1P42839 tP(UGG)O3tP(UGG)O3 72 nt13.34□□□□□ -0.27
VNX1P42839 ARA2YMR041C 1008 nt13.33□□□□□ -0.28
VNX1P42839 YNR068CYNR068C 819 nt13.32□□□□□ -0.28
VNX1P42839 PHO92YDR374C 921 nt13.31□□□□□ -0.28
VNX1P42839 snR78snR78 87 nt13.26□□□□□ -0.29
VNX1P42839 NEM1YHR004C 1341 nt13.22□□□□□ -0.29
VNX1P42839 RRN5YLR141W 1092 nt13.21□□□□□ -0.29
VNX1P42839 YPL168WYPL168W 1293 nt13.21□□□□□ -0.29
VNX1P42839 YHL044WYHL044W 708 nt13.16□□□□□ -0.3
VNX1P42839 RPM1RPM1 483 nt13.14□□□□□ -0.31
VNX1P42839 UTP6YDR449C 1323 nt13.11□□□□□ -0.31
VNX1P42839 SKG1YKR100C 1068 nt13.1□□□□□ -0.31
VNX1P42839 AST1YBL069W 1290 nt13.09□□□□□ -0.31
VNX1P42839 FAR3YMR052W 615 nt13.08□□□□□ -0.32
VNX1P42839 RSB1YOR049C 1065 nt13.08□□□□□ -0.32
VNX1P42839 PST2YDR032C 597 nt13.06□□□□□ -0.32
VNX1P42839 ABZ2YMR289W 1125 nt13.06□□□□□ -0.32
VNX1P42839 URE2YNL229C 1065 nt13.06□□□□□ -0.32
VNX1P42839 SHR5YOL110W 714 nt13.04□□□□□ -0.32
VNX1P42839 YLR122CYLR122C 378 nt13.02□□□□□ -0.33
VNX1P42839 YDR008CYDR008C 351 nt13.01□□□□□ -0.33
VNX1P42839 YMR119W-AYMR119W-A 375 nt12.99□□□□□ -0.33
VNX1P42839 PUT4YOR348C 1884 nt12.99□□□□□ -0.33
VNX1P42839 YER088W-BYER088W-B 147 nt12.96□□□□□ -0.33
VNX1P42839 YDJ1YNL064C 1230 nt12.95□□□□□ -0.34
VNX1P42839 STD1YOR047C 1335 nt12.94□□□□□ -0.34
VNX1P42839 YEL009C-AYEL009C-A 408 nt12.88□□□□□ -0.35
VNX1P42839 PEX27YOR193W 1131 nt12.87□□□□□ -0.35
VNX1P42839 YAL016C-BYAL016C-B 186 nt12.85□□□□□ -0.35
VNX1P42839 URN1YPR152C 1398 nt12.81□□□□□ -0.36
VNX1P42839 YKL097CYKL097C 411 nt12.78□□□□□ -0.36
VNX1P42839 GTT3YEL017W 1014 nt12.77□□□□□ -0.37
VNX1P42839 DEP1YAL013W 1218 nt12.77□□□□□ -0.37
VNX1P42839 PUS9YDL036C 1389 nt12.74□□□□□ -0.37
VNX1P42839 HAS1YMR290C 1518 nt12.73□□□□□ -0.37
VNX1P42839 ARE1YCR048W 1833 nt12.71□□□□□ -0.38
VNX1P42839 IRC14YOR135C 342 nt12.7□□□□□ -0.38
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms