Protein–RNA interactions for Protein: P42948

SET4, SET domain-containing protein 4, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SET4P42948 YML009W-BYML009W-B 477 nt24.73■■□□□ 1.55
SET4P42948 NOP1YDL014W 984 nt24.1■■□□□ 1.45
SET4P42948 NSR1YGR159C 1245 nt24.05■■□□□ 1.44
SET4P42948 YKL036CYKL036C 393 nt22.78■■□□□ 1.24
SET4P42948 YJL027CYJL027C 417 nt21.38■■□□□ 1.01
SET4P42948 Q0297Q0297 156 nt21.34■■□□□ 1.01
SET4P42948 SRX1YKL086W 384 nt21.14■□□□□ 0.97
SET4P42948 SCS3YGL126W 1143 nt21.08■□□□□ 0.97
SET4P42948 MDJ1YFL016C 1536 nt21.04■□□□□ 0.96
SET4P42948 YCR051WYCR051W 669 nt20.12■□□□□ 0.81
SET4P42948 YOL085CYOL085C 342 nt19.78■□□□□ 0.76
SET4P42948 PKP1YIL042C 1185 nt19.49■□□□□ 0.71
SET4P42948 RPP1BYDL130W 321 nt19.15■□□□□ 0.66
SET4P42948 SCJ1YMR214W 1134 nt19.14■□□□□ 0.65
SET4P42948 ATS1YAL020C 1002 nt18.96■□□□□ 0.63
SET4P42948 TRN1tP(UGG)A 72 nt18.87■□□□□ 0.61
SET4P42948 SUF9tP(UGG)F 72 nt18.87■□□□□ 0.61
SET4P42948 SUF8tP(UGG)H 72 nt18.87■□□□□ 0.61
SET4P42948 tP(UGG)LtP(UGG)L 72 nt18.87■□□□□ 0.61
SET4P42948 SUF7tP(UGG)M 72 nt18.87■□□□□ 0.61
SET4P42948 tP(UGG)N1tP(UGG)N1 72 nt18.87■□□□□ 0.61
SET4P42948 tP(UGG)N2tP(UGG)N2 72 nt18.87■□□□□ 0.61
SET4P42948 tP(UGG)O1tP(UGG)O1 72 nt18.87■□□□□ 0.61
SET4P42948 SUF11tP(UGG)O2 72 nt18.87■□□□□ 0.61
SET4P42948 DBP2YNL112W 1641 nt18.84■□□□□ 0.61
SET4P42948 CCC1YLR220W 969 nt18.71■□□□□ 0.59
SET4P42948 PET122YER153C 765 nt18.32■□□□□ 0.52
SET4P42948 SCR1SCR1 522 nt18.12■□□□□ 0.49
SET4P42948 tP(UGG)O3tP(UGG)O3 72 nt18.01■□□□□ 0.47
SET4P42948 RRN5YLR141W 1092 nt17.81■□□□□ 0.44
SET4P42948 YBR190WYBR190W 312 nt17.68■□□□□ 0.42
SET4P42948 RVS167YDR388W 1449 nt17.64■□□□□ 0.41
SET4P42948 RSB1YOR049C 1065 nt17.57■□□□□ 0.4
SET4P42948 RTC3YHR087W 336 nt17.54■□□□□ 0.4
SET4P42948 PST2YDR032C 597 nt17.49■□□□□ 0.39
SET4P42948 YER088W-BYER088W-B 147 nt17.48■□□□□ 0.39
SET4P42948 YDJ1YNL064C 1230 nt17.35■□□□□ 0.37
SET4P42948 SHR5YOL110W 714 nt17.2■□□□□ 0.34
SET4P42948 YKL097CYKL097C 411 nt17.01■□□□□ 0.31
SET4P42948 GAR1YHR089C 618 nt16.96■□□□□ 0.31
SET4P42948 SHU1YHL006C 453 nt16.7■□□□□ 0.26
SET4P42948 DEP1YAL013W 1218 nt16.65■□□□□ 0.26
SET4P42948 YGR139WYGR139W 339 nt16.52■□□□□ 0.24
SET4P42948 URN1YPR152C 1398 nt16.45■□□□□ 0.22
SET4P42948 YOR139CYOR139C 393 nt16.36■□□□□ 0.21
SET4P42948 TIR1YER011W 765 nt16.35■□□□□ 0.21
SET4P42948 YAL037C-BYAL037C-B 975 nt16.33■□□□□ 0.2
SET4P42948 YNL208WYNL208W 600 nt16.33■□□□□ 0.2
SET4P42948 RPN10YHR200W 807 nt16.18■□□□□ 0.18
SET4P42948 SSA1YAL005C 1929 nt16.13■□□□□ 0.17
SET4P42948 SRB2YHR041C 633 nt16.09■□□□□ 0.17
SET4P42948 OPI9YLR338W 858 nt16.08■□□□□ 0.16
SET4P42948 NPL3YDR432W 1245 nt15.97■□□□□ 0.15
SET4P42948 SAH1YER043C 1350 nt15.91■□□□□ 0.14
SET4P42948 MNP1YGL068W 585 nt15.86■□□□□ 0.13
SET4P42948 WWM1YFL010C 636 nt15.78■□□□□ 0.12
SET4P42948 HOM6YJR139C 1080 nt15.78■□□□□ 0.12
SET4P42948 PUT4YOR348C 1884 nt15.76■□□□□ 0.11
SET4P42948 YJR120WYJR120W 351 nt15.72■□□□□ 0.11
SET4P42948 YGR021WYGR021W 873 nt15.7■□□□□ 0.1
SET4P42948 YJR018WYJR018W 363 nt15.69■□□□□ 0.1
SET4P42948 ARE1YCR048W 1833 nt15.66■□□□□ 0.1
SET4P42948 tM(CAU)CtM(CAU)C 72 nt15.64■□□□□ 0.09
SET4P42948 IMT4tM(CAU)E 72 nt15.64■□□□□ 0.09
SET4P42948 IMT3tM(CAU)J3 72 nt15.64■□□□□ 0.09
SET4P42948 IMT1tM(CAU)O1 72 nt15.64■□□□□ 0.09
SET4P42948 IMT2tM(CAU)P 72 nt15.64■□□□□ 0.09
SET4P42948 YOL037CYOL037C 354 nt15.63■□□□□ 0.09
SET4P42948 PUN1YLR414C 792 nt15.56■□□□□ 0.08
SET4P42948 RKM5YLR137W 1104 nt15.54■□□□□ 0.08
SET4P42948 SSA3YBL075C 1950 nt15.51■□□□□ 0.07
SET4P42948 RPP2BYDR382W 333 nt15.43■□□□□ 0.06
SET4P42948 YHR049C-AYHR049C-A 297 nt15.43■□□□□ 0.06
SET4P42948 YFL021C-AYFL021C-A 855 nt15.41■□□□□ 0.06
SET4P42948 PTC2YER089C 1395 nt15.37■□□□□ 0.05
SET4P42948 VAR1Q0140 1197 nt15.36■□□□□ 0.05
SET4P42948 PUS2YGL063W 1113 nt15.32■□□□□ 0.04
SET4P42948 POA1YBR022W 534 nt15.31■□□□□ 0.04
SET4P42948 YLR281CYLR281C 468 nt15.3■□□□□ 0.04
SET4P42948 BDH2YAL061W 1254 nt15.28■□□□□ 0.04
SET4P42948 MOT3YMR070W 1473 nt15.23■□□□□ 0.03
SET4P42948 WHI5YOR083W 888 nt15.18■□□□□ 0.02
SET4P42948 LSM3YLR438C-A 270 nt15.12■□□□□ 0.01
SET4P42948 BUD23YCR047C 828 nt15.09■□□□□ 0.01
SET4P42948 YPR011CYPR011C 981 nt15.06■□□□□ 0
SET4P42948 NAB2YGL122C 1578 nt15.03■□□□□ -0
SET4P42948 YBL100CYBL100C 315 nt15.02■□□□□ -0
SET4P42948 FIS1YIL065C 468 nt15□□□□□ -0.01
SET4P42948 INM2YDR287W 879 nt14.99□□□□□ -0.01
SET4P42948 YLR236CYLR236C 324 nt14.98□□□□□ -0.01
SET4P42948 FPR4YLR449W 1179 nt14.97□□□□□ -0.01
SET4P42948 DAL1YIR027C 1383 nt14.97□□□□□ -0.01
SET4P42948 FMP45YDL222C 930 nt14.96□□□□□ -0.01
SET4P42948 NME1NME1 340 nt14.94□□□□□ -0.02
SET4P42948 DSK2YMR276W 1122 nt14.9□□□□□ -0.02
SET4P42948 BSC6YOL137W 1494 nt14.88□□□□□ -0.03
SET4P42948 FUN26YAL022C 1554 nt14.87□□□□□ -0.03
SET4P42948 PHO4YFR034C 939 nt14.87□□□□□ -0.03
SET4P42948 TRM9YML014W 840 nt14.87□□□□□ -0.03
SET4P42948 Q0182Q0182 405 nt14.83□□□□□ -0.04
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms