RNA–Protein interactions for RNA: YDR472W

TRS31, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS31, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS31YDR472W MTC1P47018 478 aaKnown RBP15.9■□□□□ 0.14
TRS31YDR472W DRS1P32892 752 aaKnown RBP14.74□□□□□ -0.05
TRS31YDR472W FAP1P53971 965 aa14.44□□□□□ -0.1
TRS31YDR472W PRY3P47033 881 aa13.57□□□□□ -0.24
TRS31YDR472W PRI1P10363 409 aa13.46□□□□□ -0.25
TRS31YDR472W AAD16Q02895 342 aa13.4□□□□□ -0.26
TRS31YDR472W ISW2Q08773 1120 aa13.21□□□□□ -0.29
TRS31YDR472W RPG1P38249 964 aaKnown RBP13.06□□□□□ -0.32
TRS31YDR472W DIP2Q12220 943 aaPredicted RBP12.96□□□□□ -0.33
TRS31YDR472W YCK3P39962 524 aa12.78□□□□□ -0.36
TRS31YDR472W HAA1Q12753 694 aaKnown RBP12.73□□□□□ -0.37
TRS31YDR472W TSR3Q12094 313 aaKnown RBP12.71□□□□□ -0.37
TRS31YDR472W RSE1Q04693 1361 aaKnown RBP12.56□□□□□ -0.4
TRS31YDR472W AVT3P36062 692 aa12.45□□□□□ -0.42
TRS31YDR472W MRPL32P25348 183 aa12.23□□□□□ -0.45
TRS31YDR472W BFR2Q06631 534 aaKnown RBP12.2□□□□□ -0.46
TRS31YDR472W RPL17AP05740 184 aaKnown RBP12.16□□□□□ -0.46
TRS31YDR472W RPL17BP46990 184 aaKnown RBP12.16□□□□□ -0.46
TRS31YDR472W REB1P21538 810 aa12.14□□□□□ -0.47
TRS31YDR472W SGS1P35187 1447 aa11.85□□□□□ -0.51
TRS31YDR472W YGL015CP33199 130 aa11.76□□□□□ -0.53
TRS31YDR472W SPT21P35209 758 aa11.63□□□□□ -0.55
TRS31YDR472W CDC27P38042 758 aa11.58□□□□□ -0.56
TRS31YDR472W YKR023WP36119 530 aaKnown RBP11.52□□□□□ -0.57
TRS31YDR472W INO80P53115 1489 aa11.5□□□□□ -0.57
TRS31YDR472W TCB3Q03640 1545 aaKnown RBP11.37□□□□□ -0.59
TRS31YDR472W SSN2P38931 1420 aa11.35□□□□□ -0.59
TRS31YDR472W SPA2P23201 1466 aaKnown RBP11.33□□□□□ -0.6
TRS31YDR472W UBP10P53874 792 aaPredicted RBP11.3□□□□□ -0.6
TRS31YDR472W TFC8Q12308 588 aa11.3□□□□□ -0.6
TRS31YDR472W TY1B-DR4Q07793 1604 aa11.29□□□□□ -0.6
TRS31YDR472W HOP09932 586 aa11.29□□□□□ -0.6
TRS31YDR472W DCD1P06773 312 aa11.24□□□□□ -0.61
TRS31YDR472W MAP2P38174 421 aaKnown RBP11.24□□□□□ -0.61
TRS31YDR472W RIM101P33400 625 aa11.2□□□□□ -0.62
TRS31YDR472W MON2P48563 1636 aaPredicted RBP11.17□□□□□ -0.62
TRS31YDR472W HSL1P34244 1518 aa11.09□□□□□ -0.63
TRS31YDR472W SPT6P23615 1451 aaKnown RBP11.06□□□□□ -0.64
TRS31YDR472W SWR1Q05471 1514 aa11.02□□□□□ -0.65
TRS31YDR472W SCY1P53009 804 aa11□□□□□ -0.65
TRS31YDR472W BCH2P36122 765 aa10.92□□□□□ -0.66
TRS31YDR472W HIR3P47171 1648 aa10.91□□□□□ -0.66
TRS31YDR472W SLX5P32828 619 aaKnown RBP10.88□□□□□ -0.67
TRS31YDR472W XRN1P22147 1528 aaKnown RBP10.86□□□□□ -0.67
TRS31YDR472W TIF4632P39936 914 aaKnown RBP10.84□□□□□ -0.67
TRS31YDR472W BUD31P25337 157 aaPredicted RBP10.82□□□□□ -0.68
TRS31YDR472W OXP1P28273 1286 aa10.81□□□□□ -0.68
TRS31YDR472W TGL3P40308 642 aa10.77□□□□□ -0.69
TRS31YDR472W REV3P14284 1504 aa10.72□□□□□ -0.69
TRS31YDR472W DNA2P38859 1522 aa10.68□□□□□ -0.7
TRS31YDR472W PTP3P40048 928 aa10.68□□□□□ -0.7
TRS31YDR472W YIL055CP40523 627 aaKnown RBP10.68□□□□□ -0.7
TRS31YDR472W TAF2P23255 1407 aa10.67□□□□□ -0.7
TRS31YDR472W EPS1P40557 701 aa10.65□□□□□ -0.7
TRS31YDR472W TFA1P36100 482 aa10.63□□□□□ -0.71
TRS31YDR472W THO2P53552 1597 aaKnown RBP10.62□□□□□ -0.71
TRS31YDR472W KOG1P38873 1557 aa10.6□□□□□ -0.71
TRS31YDR472W BDF1P35817 686 aa10.6□□□□□ -0.71
TRS31YDR472W SIN3P22579 1536 aa10.58□□□□□ -0.72
TRS31YDR472W SSK2P53599 1579 aa10.57□□□□□ -0.72
TRS31YDR472W ESP1Q03018 1630 aa10.51□□□□□ -0.73
TRS31YDR472W RSM7P47150 247 aa10.51□□□□□ -0.73
TRS31YDR472W UBP9P39967 754 aa10.49□□□□□ -0.73
TRS31YDR472W YAH1Q12184 172 aaKnown RBP10.49□□□□□ -0.73
TRS31YDR472W BUD4P47136 1447 aa10.47□□□□□ -0.73
TRS31YDR472W BBC1P47068 1157 aa10.46□□□□□ -0.73
TRS31YDR472W ECM5Q03214 1411 aa10.46□□□□□ -0.74
TRS31YDR472W ATG2P53855 1592 aa10.43□□□□□ -0.74
TRS31YDR472W SKI3P17883 1432 aaKnown RBP10.43□□□□□ -0.74
TRS31YDR472W MYO2P19524 1574 aaKnown RBP10.43□□□□□ -0.74
TRS31YDR472W AI2P03876 854 aa10.42□□□□□ -0.74
TRS31YDR472W YLR271WQ06152 274 aa10.31□□□□□ -0.76
TRS31YDR472W MDS3P53094 1487 aa10.3□□□□□ -0.76
TRS31YDR472W MST1P07236 462 aa10.3□□□□□ -0.76
TRS31YDR472W SIS1P25294 352 aaKnown RBP10.3□□□□□ -0.76
TRS31YDR472W YOR238WQ08634 303 aa10.29□□□□□ -0.76
TRS31YDR472W PEP1P32319 1579 aa10.29□□□□□ -0.76
TRS31YDR472W STU1P38198 1513 aa10.28□□□□□ -0.76
TRS31YDR472W NSR1P27476 414 aaKnown RBP RIP-Chip data10.28□□□□□ -0.76not detected
TRS31YDR472W YPK9Q12697 1472 aa10.26□□□□□ -0.77
TRS31YDR472W POL1P13382 1468 aa10.24□□□□□ -0.77
TRS31YDR472W MMS22Q06164 1454 aa10.22□□□□□ -0.77
TRS31YDR472W BPT1P14772 1559 aa10.22□□□□□ -0.77
TRS31YDR472W SCC2Q04002 1493 aa10.21□□□□□ -0.78
TRS31YDR472W RKR1Q04781 1562 aa10.21□□□□□ -0.78
TRS31YDR472W YAP5P40574 245 aa10.2□□□□□ -0.78
TRS31YDR472W PSD2P53037 1138 aaKnown RBP10.18□□□□□ -0.78
TRS31YDR472W SSP1P38871 571 aa10.16□□□□□ -0.78
TRS31YDR472W YBL029C-AQ3E756 94 aa10.16□□□□□ -0.78
TRS31YDR472W CHD1P32657 1468 aa10.16□□□□□ -0.78
TRS31YDR472W SAS10Q12136 610 aaPredicted RBP10.14□□□□□ -0.79
TRS31YDR472W UFD4P33202 1483 aa10.13□□□□□ -0.79
TRS31YDR472W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79not detected
TRS31YDR472W RPO31P04051 1460 aa10.12□□□□□ -0.79
TRS31YDR472W TY2B-LR1P0C2J3 1770 aa10.12□□□□□ -0.79
TRS31YDR472W TY2B-FP0CX63 1770 aa10.12□□□□□ -0.79
TRS31YDR472W TY2B-GR2P0CX64 1770 aa10.12□□□□□ -0.79
TRS31YDR472W TY2B-CP25384 1770 aa10.12□□□□□ -0.79
TRS31YDR472W TY2B-DR2Q03494 1770 aa10.12□□□□□ -0.79
TRS31YDR472W TY1B-DR1Q03855 1755 aa10.12□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms