RNA–Protein interactions for RNA: YDR200C

VPS64, Transcript of Protein required for cytoplasm to vacuole targeting of proteins, yeastyeast

Gene VPS64, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS64YDR200C FAP1P53971 965 aa10.44□□□□□ -0.74
VPS64YDR200C PRY3P47033 881 aa9.95□□□□□ -0.82
VPS64YDR200C MTC1P47018 478 aaKnown RBP9.31□□□□□ -0.92
VPS64YDR200C YCK3P39962 524 aa9.22□□□□□ -0.93
VPS64YDR200C HAA1Q12753 694 aaKnown RBP9.19□□□□□ -0.94
VPS64YDR200C BUD31P25337 157 aaPredicted RBP8.64□□□□□ -1.03
VPS64YDR200C AAD16Q02895 342 aa8.6□□□□□ -1.03
VPS64YDR200C PRI1P10363 409 aa8.28□□□□□ -1.08
VPS64YDR200C DRS1P32892 752 aaKnown RBP8.15□□□□□ -1.1
VPS64YDR200C SIS1P25294 352 aaKnown RBP7.97□□□□□ -1.13
VPS64YDR200C YGL015CP33199 130 aa7.94□□□□□ -1.14
VPS64YDR200C ISW2Q08773 1120 aa7.88□□□□□ -1.15
VPS64YDR200C RPG1P38249 964 aaKnown RBP7.8□□□□□ -1.16
VPS64YDR200C TSR3Q12094 313 aaKnown RBP7.75□□□□□ -1.17
VPS64YDR200C MRPL32P25348 183 aa7.48□□□□□ -1.21
VPS64YDR200C UBP9P39967 754 aa7.23□□□□□ -1.25
VPS64YDR200C DIP2Q12220 943 aaPredicted RBP7.21□□□□□ -1.26
VPS64YDR200C RSE1Q04693 1361 aaKnown RBP7.2□□□□□ -1.26
VPS64YDR200C REB1P21538 810 aa7.04□□□□□ -1.28
VPS64YDR200C RPL17AP05740 184 aaKnown RBP7.01□□□□□ -1.29
VPS64YDR200C RPL17BP46990 184 aaKnown RBP7.01□□□□□ -1.29
VPS64YDR200C CDC27P38042 758 aa6.96□□□□□ -1.3
VPS64YDR200C RGA2Q06407 1009 aa6.92□□□□□ -1.3
VPS64YDR200C UBP10P53874 792 aaPredicted RBP6.9□□□□□ -1.31
VPS64YDR200C AVT3P36062 692 aa6.84□□□□□ -1.31
VPS64YDR200C MAP2P38174 421 aaKnown RBP6.83□□□□□ -1.32
VPS64YDR200C BFR2Q06631 534 aaKnown RBP6.81□□□□□ -1.32
VPS64YDR200C YKR023WP36119 530 aaKnown RBP6.76□□□□□ -1.33
VPS64YDR200C SPT21P35209 758 aa6.67□□□□□ -1.34
VPS64YDR200C TFC8Q12308 588 aa6.62□□□□□ -1.35
VPS64YDR200C TIF4632P39936 914 aaKnown RBP6.61□□□□□ -1.35
VPS64YDR200C HOP09932 586 aa6.6□□□□□ -1.35
VPS64YDR200C TGL3P40308 642 aa6.6□□□□□ -1.35
VPS64YDR200C DCD1P06773 312 aa6.58□□□□□ -1.36
VPS64YDR200C SCY1P53009 804 aa6.55□□□□□ -1.36
VPS64YDR200C SLX5P32828 619 aaKnown RBP6.53□□□□□ -1.36
VPS64YDR200C BCH2P36122 765 aa6.37□□□□□ -1.39
VPS64YDR200C YJL171CP46992 396 aa6.33□□□□□ -1.4
VPS64YDR200C RIM101P33400 625 aa6.27□□□□□ -1.41
VPS64YDR200C TFA1P36100 482 aa6.26□□□□□ -1.41
VPS64YDR200C MST1P07236 462 aa6.25□□□□□ -1.41
VPS64YDR200C YBL029C-AQ3E756 94 aa6.22□□□□□ -1.41
VPS64YDR200C RGA1P39083 1007 aa6.16□□□□□ -1.42
VPS64YDR200C EPS1P40557 701 aa6.16□□□□□ -1.42
VPS64YDR200C YOR238WQ08634 303 aa6.16□□□□□ -1.42
VPS64YDR200C AIR2Q12476 344 aaKnown RBP6.16□□□□□ -1.42
VPS64YDR200C BDF1P35817 686 aa6.15□□□□□ -1.42
VPS64YDR200C VNX1P42839 908 aa6.14□□□□□ -1.43
VPS64YDR200C NSR1P27476 414 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
VPS64YDR200C SPP1Q03012 353 aa6.08□□□□□ -1.44
VPS64YDR200C OXP1P28273 1286 aa6.02□□□□□ -1.45
VPS64YDR200C FKH1P40466 484 aa6.02□□□□□ -1.45
VPS64YDR200C YAP5P40574 245 aa6.02□□□□□ -1.45
VPS64YDR200C WSC3Q12215 556 aa6□□□□□ -1.45
VPS64YDR200C TIF11P38912 153 aaKnown RBP5.98□□□□□ -1.45
VPS64YDR200C YIL055CP40523 627 aaKnown RBP5.95□□□□□ -1.46
VPS64YDR200C PTP3P40048 928 aa5.95□□□□□ -1.46
VPS64YDR200C BMT6Q12291 365 aa5.93□□□□□ -1.46
VPS64YDR200C BBC1P47068 1157 aa5.92□□□□□ -1.46
VPS64YDR200C GTT3P39996 337 aa5.9□□□□□ -1.47
VPS64YDR200C LDB19Q12502 818 aa5.88□□□□□ -1.47
VPS64YDR200C AI2P03876 854 aa5.86□□□□□ -1.47
VPS64YDR200C RSM7P47150 247 aa5.85□□□□□ -1.47
VPS64YDR200C IOC2Q12072 812 aa5.85□□□□□ -1.47
VPS64YDR200C ULI1P43604 169 aa5.85□□□□□ -1.47
VPS64YDR200C YAH1Q12184 172 aaKnown RBP5.84□□□□□ -1.47
VPS64YDR200C MON2P48563 1636 aaPredicted RBP5.83□□□□□ -1.48
VPS64YDR200C INO80P53115 1489 aa5.76□□□□□ -1.49
VPS64YDR200C MSB4Q12317 492 aa5.76□□□□□ -1.49
VPS64YDR200C EAP1P36041 632 aaKnown RBP5.74□□□□□ -1.49
VPS64YDR200C PIB1Q06651 286 aa5.73□□□□□ -1.49
VPS64YDR200C RTG1P32607 177 aa5.71□□□□□ -1.49
VPS64YDR200C NCR1Q12200 1170 aa5.69□□□□□ -1.5
VPS64YDR200C YLR271WQ06152 274 aa5.68□□□□□ -1.5
VPS64YDR200C TRP5P00931 707 aaKnown RBP5.67□□□□□ -1.5
VPS64YDR200C SEC61P32915 480 aa5.66□□□□□ -1.5
VPS64YDR200C YOL036WQ08206 761 aa5.66□□□□□ -1.5
VPS64YDR200C SET4P42948 560 aa5.64□□□□□ -1.51
VPS64YDR200C YNL035CP53962 389 aaKnown RBP5.64□□□□□ -1.51
VPS64YDR200C PSD2P53037 1138 aaKnown RBP5.63□□□□□ -1.51
VPS64YDR200C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
VPS64YDR200C MRM1P25270 412 aa5.6□□□□□ -1.51
VPS64YDR200C SSP1P38871 571 aa5.6□□□□□ -1.51
VPS64YDR200C BCK2P33306 851 aa5.59□□□□□ -1.51
VPS64YDR200C TFG1P41895 735 aaPredicted RBP5.56□□□□□ -1.52
VPS64YDR200C YMR1P47147 688 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
VPS64YDR200C SAM3Q08986 587 aa5.54□□□□□ -1.52
VPS64YDR200C VMA1P17255 1071 aaKnown RBP5.53□□□□□ -1.52
VPS64YDR200C CHL1P22516 861 aaPredicted RBP5.53□□□□□ -1.52
VPS64YDR200C SAP30P38429 201 aa5.53□□□□□ -1.52
VPS64YDR200C DBP1P24784 617 aaKnown RBP5.53□□□□□ -1.52
VPS64YDR200C TCB3Q03640 1545 aaKnown RBP5.53□□□□□ -1.52
VPS64YDR200C SWR1Q05471 1514 aa5.53□□□□□ -1.52
VPS64YDR200C DAN4P47179 1161 aa5.52□□□□□ -1.53
VPS64YDR200C TY1B-DR4Q07793 1604 aa5.51□□□□□ -1.53
VPS64YDR200C VPS29P38759 282 aa5.51□□□□□ -1.53
VPS64YDR200C JIP4Q03361 876 aa5.51□□□□□ -1.53
VPS64YDR200C YDL129WQ07555 291 aa5.5□□□□□ -1.53
VPS64YDR200C DNA2P38859 1522 aa5.5□□□□□ -1.53
VPS64YDR200C PRE3P38624 215 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms