RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeastyeast

Gene DPB4, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB4YDR121W MTC1P47018 478 aaKnown RBP11.66□□□□□ -0.54
DPB4YDR121W FAP1P53971 965 aa11.11□□□□□ -0.63
DPB4YDR121W PRY3P47033 881 aa10.5□□□□□ -0.73
DPB4YDR121W PRI1P10363 409 aa10.22□□□□□ -0.77
DPB4YDR121W AAD16Q02895 342 aa10.2□□□□□ -0.78
DPB4YDR121W DRS1P32892 752 aaKnown RBP10.14□□□□□ -0.79
DPB4YDR121W YCK3P39962 524 aa10.09□□□□□ -0.79
DPB4YDR121W HAA1Q12753 694 aaKnown RBP9.87□□□□□ -0.83
DPB4YDR121W ISW2Q08773 1120 aa9.74□□□□□ -0.85
DPB4YDR121W RPG1P38249 964 aaKnown RBP9.68□□□□□ -0.86
DPB4YDR121W TSR3Q12094 313 aaKnown RBP9.57□□□□□ -0.88
DPB4YDR121W MON2P48563 1636 aaPredicted RBP9.2□□□□□ -0.94
DPB4YDR121W MRPL32P25348 183 aa9.17□□□□□ -0.94
DPB4YDR121W DIP2Q12220 943 aaPredicted RBP9.16□□□□□ -0.94
DPB4YDR121W INO80P53115 1489 aa9.07□□□□□ -0.96
DPB4YDR121W RSE1Q04693 1361 aaKnown RBP9.03□□□□□ -0.96
DPB4YDR121W YGL015CP33199 130 aa9.01□□□□□ -0.97
DPB4YDR121W RPL17AP05740 184 aaKnown RBP8.78□□□□□ -1
DPB4YDR121W RPL17BP46990 184 aaKnown RBP8.78□□□□□ -1
DPB4YDR121W REB1P21538 810 aa8.76□□□□□ -1.01
DPB4YDR121W AVT3P36062 692 aa8.72□□□□□ -1.01
DPB4YDR121W SWR1Q05471 1514 aa8.71□□□□□ -1.01
DPB4YDR121W DNA2P38859 1522 aa8.7□□□□□ -1.02
DPB4YDR121W CDC27P38042 758 aa8.67□□□□□ -1.02
DPB4YDR121W BFR2Q06631 534 aaKnown RBP8.67□□□□□ -1.02
DPB4YDR121W TY1B-DR4Q07793 1604 aa8.63□□□□□ -1.03
DPB4YDR121W BUD31P25337 157 aaPredicted RBP8.6□□□□□ -1.03
DPB4YDR121W KOG1P38873 1557 aa8.56□□□□□ -1.04
DPB4YDR121W TCB3Q03640 1545 aaKnown RBP8.56□□□□□ -1.04
DPB4YDR121W TFA1P36100 482 aa8.54□□□□□ -1.04
DPB4YDR121W YKR023WP36119 530 aaKnown RBP8.5□□□□□ -1.05
DPB4YDR121W UBP10P53874 792 aaPredicted RBP8.5□□□□□ -1.05
DPB4YDR121W SPT21P35209 758 aa8.47□□□□□ -1.05
DPB4YDR121W MAP2P38174 421 aaKnown RBP8.45□□□□□ -1.06
DPB4YDR121W SGS1P35187 1447 aa8.34□□□□□ -1.07
DPB4YDR121W TFC8Q12308 588 aa8.31□□□□□ -1.08
DPB4YDR121W HSL1P34244 1518 aa8.29□□□□□ -1.08
DPB4YDR121W HOP09932 586 aa8.26□□□□□ -1.09
DPB4YDR121W SPT6P23615 1451 aaKnown RBP8.25□□□□□ -1.09
DPB4YDR121W DCD1P06773 312 aa8.24□□□□□ -1.09
DPB4YDR121W TGL3P40308 642 aa8.14□□□□□ -1.11
DPB4YDR121W SCY1P53009 804 aa8.13□□□□□ -1.11
DPB4YDR121W SPA2P23201 1466 aaKnown RBP8.13□□□□□ -1.11
DPB4YDR121W HIR3P47171 1648 aa8.1□□□□□ -1.11
DPB4YDR121W TIF4632P39936 914 aaKnown RBP8.09□□□□□ -1.11
DPB4YDR121W SLX5P32828 619 aaKnown RBP8.07□□□□□ -1.12
DPB4YDR121W THO2P53552 1597 aaKnown RBP8.05□□□□□ -1.12
DPB4YDR121W ECM5Q03214 1411 aa8.05□□□□□ -1.12
DPB4YDR121W SIS1P25294 352 aaKnown RBP8.03□□□□□ -1.12
DPB4YDR121W UBP9P39967 754 aa8.02□□□□□ -1.13
DPB4YDR121W RIM101P33400 625 aa8.01□□□□□ -1.13
DPB4YDR121W BCH2P36122 765 aa8.01□□□□□ -1.13
DPB4YDR121W BUD4P47136 1447 aa8.01□□□□□ -1.13
DPB4YDR121W MDS3P53094 1487 aa7.99□□□□□ -1.13
DPB4YDR121W PEP1P32319 1579 aa7.91□□□□□ -1.14
DPB4YDR121W XRN1P22147 1528 aaKnown RBP7.9□□□□□ -1.14
DPB4YDR121W RQC2Q12532 1038 aaKnown RBP7.88□□□□□ -1.15
DPB4YDR121W ATG2P53855 1592 aa7.87□□□□□ -1.15
DPB4YDR121W REV3P14284 1504 aa7.83□□□□□ -1.16
DPB4YDR121W MST1P07236 462 aa7.79□□□□□ -1.16
DPB4YDR121W BPT1P14772 1559 aa7.76□□□□□ -1.17
DPB4YDR121W BDF1P35817 686 aa7.74□□□□□ -1.17
DPB4YDR121W EPS1P40557 701 aa7.74□□□□□ -1.17
DPB4YDR121W OXP1P28273 1286 aa7.71□□□□□ -1.18
DPB4YDR121W SIN3P22579 1536 aa7.69□□□□□ -1.18
DPB4YDR121W SSK2P53599 1579 aa7.68□□□□□ -1.18
DPB4YDR121W SSN2P38931 1420 aa7.67□□□□□ -1.18
DPB4YDR121W YBL029C-AQ3E756 94 aa7.66□□□□□ -1.18
DPB4YDR121W NSR1P27476 414 aaKnown RBP RIP-Chip data7.64□□□□□ -1.19not detected
DPB4YDR121W YCF1P39109 1515 aaKnown RBP7.63□□□□□ -1.19
DPB4YDR121W TAF2P23255 1407 aa7.63□□□□□ -1.19
DPB4YDR121W SKI3P17883 1432 aaKnown RBP7.62□□□□□ -1.19
DPB4YDR121W YOR238WQ08634 303 aa7.62□□□□□ -1.19
DPB4YDR121W ESP1Q03018 1630 aa7.61□□□□□ -1.19
DPB4YDR121W VNX1P42839 908 aa7.59□□□□□ -1.19
DPB4YDR121W UFD4P33202 1483 aa7.51□□□□□ -1.21
DPB4YDR121W SCC2Q04002 1493 aa7.49□□□□□ -1.21
DPB4YDR121W PTP3P40048 928 aa7.49□□□□□ -1.21
DPB4YDR121W TY2B-LR1P0C2J3 1770 aa7.48□□□□□ -1.21
DPB4YDR121W TY2B-FP0CX63 1770 aa7.48□□□□□ -1.21
DPB4YDR121W TY2B-GR2P0CX64 1770 aa7.48□□□□□ -1.21
DPB4YDR121W TY2B-CP25384 1770 aa7.48□□□□□ -1.21
DPB4YDR121W TY2B-DR2Q03494 1770 aa7.48□□□□□ -1.21
DPB4YDR121W TY1B-DR1Q03855 1755 aa7.48□□□□□ -1.21
DPB4YDR121W TY2B-DR3Q07791 1770 aaKnown RBP7.48□□□□□ -1.21
DPB4YDR121W TY2B-OR1Q12113 1770 aa7.48□□□□□ -1.21
DPB4YDR121W TY2B-DR1Q12472 1770 aa7.48□□□□□ -1.21
DPB4YDR121W TY2B-OR2Q12501 1770 aa7.48□□□□□ -1.21
DPB4YDR121W ESC1Q03661 1658 aaKnown RBP7.48□□□□□ -1.21
DPB4YDR121W YAP5P40574 245 aa7.48□□□□□ -1.21
DPB4YDR121W YIL055CP40523 627 aaKnown RBP7.47□□□□□ -1.21
DPB4YDR121W YPK9Q12697 1472 aa7.47□□□□□ -1.21
DPB4YDR121W CDC25P04821 1589 aa7.46□□□□□ -1.21
DPB4YDR121W MYO2P19524 1574 aaKnown RBP7.46□□□□□ -1.21
DPB4YDR121W TY1B-BRQ12193 1756 aa7.46□□□□□ -1.21
DPB4YDR121W TY1B-GR3Q12316 1755 aa7.46□□□□□ -1.21
DPB4YDR121W TY1B-ORQ92393 1755 aa7.46□□□□□ -1.21
DPB4YDR121W SPP1Q03012 353 aa7.46□□□□□ -1.22
DPB4YDR121W AIR2Q12476 344 aaKnown RBP7.45□□□□□ -1.22
DPB4YDR121W RSM7P47150 247 aa7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms