RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeastyeast

Gene LDS1, Length 978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDS1YAL018C MTC1P47018 478 aaKnown RBP14□□□□□ -0.17
LDS1YAL018C FAP1P53971 965 aa13.24□□□□□ -0.29
LDS1YAL018C DRS1P32892 752 aaKnown RBP13.01□□□□□ -0.33
LDS1YAL018C PRY3P47033 881 aa12.55□□□□□ -0.4
LDS1YAL018C YCK3P39962 524 aa11.98□□□□□ -0.49
LDS1YAL018C PRI1P10363 409 aa11.96□□□□□ -0.49
LDS1YAL018C AAD16Q02895 342 aa11.96□□□□□ -0.49
LDS1YAL018C HAA1Q12753 694 aaKnown RBP11.73□□□□□ -0.53
LDS1YAL018C ISW2Q08773 1120 aa11.65□□□□□ -0.54
LDS1YAL018C RPG1P38249 964 aaKnown RBP11.55□□□□□ -0.56
LDS1YAL018C DIP2Q12220 943 aaPredicted RBP11.42□□□□□ -0.58
LDS1YAL018C TSR3Q12094 313 aaKnown RBP11.33□□□□□ -0.6
LDS1YAL018C SGS1P35187 1447 aa11.16□□□□□ -0.62
LDS1YAL018C AVT3P36062 692 aa11.05□□□□□ -0.64
LDS1YAL018C INO80P53115 1489 aa11.04□□□□□ -0.64
LDS1YAL018C RSE1Q04693 1361 aaKnown RBP11.03□□□□□ -0.64
LDS1YAL018C TCB3Q03640 1545 aaKnown RBP10.95□□□□□ -0.66
LDS1YAL018C MON2P48563 1636 aaPredicted RBP10.94□□□□□ -0.66
LDS1YAL018C MRPL32P25348 183 aa10.88□□□□□ -0.67
LDS1YAL018C BFR2Q06631 534 aaKnown RBP10.8□□□□□ -0.68
LDS1YAL018C RPL17AP05740 184 aaKnown RBP10.71□□□□□ -0.69
LDS1YAL018C RPL17BP46990 184 aaKnown RBP10.71□□□□□ -0.69
LDS1YAL018C TY1B-DR4Q07793 1604 aa10.69□□□□□ -0.7
LDS1YAL018C REB1P21538 810 aa10.65□□□□□ -0.7
LDS1YAL018C SWR1Q05471 1514 aa10.63□□□□□ -0.71
LDS1YAL018C YGL015CP33199 130 aa10.54□□□□□ -0.72
LDS1YAL018C SPT6P23615 1451 aaKnown RBP10.52□□□□□ -0.73
LDS1YAL018C HSL1P34244 1518 aa10.49□□□□□ -0.73
LDS1YAL018C SPA2P23201 1466 aaKnown RBP10.49□□□□□ -0.73
LDS1YAL018C SSN2P38931 1420 aa10.48□□□□□ -0.73
LDS1YAL018C DNA2P38859 1522 aa10.46□□□□□ -0.74
LDS1YAL018C BUD31P25337 157 aaPredicted RBP10.45□□□□□ -0.74
LDS1YAL018C KOG1P38873 1557 aa10.39□□□□□ -0.75
LDS1YAL018C SPT21P35209 758 aa10.31□□□□□ -0.76
LDS1YAL018C HIR3P47171 1648 aa10.29□□□□□ -0.76
LDS1YAL018C CDC27P38042 758 aa10.24□□□□□ -0.77
LDS1YAL018C XRN1P22147 1528 aaKnown RBP10.23□□□□□ -0.77
LDS1YAL018C YKR023WP36119 530 aaKnown RBP10.19□□□□□ -0.78
LDS1YAL018C ECM5Q03214 1411 aa10.14□□□□□ -0.79
LDS1YAL018C BUD4P47136 1447 aa10.13□□□□□ -0.79
LDS1YAL018C THO2P53552 1597 aaKnown RBP10.05□□□□□ -0.8
LDS1YAL018C REV3P14284 1504 aa10.03□□□□□ -0.8
LDS1YAL018C UBP10P53874 792 aaPredicted RBP9.98□□□□□ -0.81
LDS1YAL018C MAP2P38174 421 aaKnown RBP9.97□□□□□ -0.81
LDS1YAL018C HOP09932 586 aa9.96□□□□□ -0.82
LDS1YAL018C TFC8Q12308 588 aa9.96□□□□□ -0.82
LDS1YAL018C TAF2P23255 1407 aa9.95□□□□□ -0.82
LDS1YAL018C SIN3P22579 1536 aa9.95□□□□□ -0.82
LDS1YAL018C DCD1P06773 312 aa9.94□□□□□ -0.82
LDS1YAL018C RIM101P33400 625 aa9.92□□□□□ -0.82
LDS1YAL018C MDS3P53094 1487 aa9.91□□□□□ -0.82
LDS1YAL018C SKI3P17883 1432 aaKnown RBP9.88□□□□□ -0.83
LDS1YAL018C SSK2P53599 1579 aa9.85□□□□□ -0.83
LDS1YAL018C PEP1P32319 1579 aa9.84□□□□□ -0.83
LDS1YAL018C ATG2P53855 1592 aa9.83□□□□□ -0.84
LDS1YAL018C YPK9Q12697 1472 aa9.74□□□□□ -0.85
LDS1YAL018C MYO2P19524 1574 aaKnown RBP9.73□□□□□ -0.85
LDS1YAL018C ESP1Q03018 1630 aa9.73□□□□□ -0.85
LDS1YAL018C SCY1P53009 804 aa9.72□□□□□ -0.85
LDS1YAL018C SIS1P25294 352 aaKnown RBP9.7□□□□□ -0.86
LDS1YAL018C UFD4P33202 1483 aa9.65□□□□□ -0.87
LDS1YAL018C RPO31P04051 1460 aa9.64□□□□□ -0.87
LDS1YAL018C SCC2Q04002 1493 aa9.64□□□□□ -0.87
LDS1YAL018C BCH2P36122 765 aa9.63□□□□□ -0.87
LDS1YAL018C SLX5P32828 619 aaKnown RBP9.61□□□□□ -0.87
LDS1YAL018C TIF4632P39936 914 aaKnown RBP9.61□□□□□ -0.87
LDS1YAL018C POL1P13382 1468 aa9.6□□□□□ -0.87
LDS1YAL018C BPT1P14772 1559 aa9.6□□□□□ -0.87
LDS1YAL018C OXP1P28273 1286 aa9.6□□□□□ -0.87
LDS1YAL018C TOP2P06786 1428 aaKnown RBP9.56□□□□□ -0.88
LDS1YAL018C TGL3P40308 642 aa9.55□□□□□ -0.88
LDS1YAL018C YTA7P40340 1379 aa9.53□□□□□ -0.88
LDS1YAL018C STU1P38198 1513 aa9.51□□□□□ -0.89
LDS1YAL018C YCF1P39109 1515 aaKnown RBP9.5□□□□□ -0.89
LDS1YAL018C TFA1P36100 482 aa9.49□□□□□ -0.89
LDS1YAL018C SMC4Q12267 1418 aa9.48□□□□□ -0.89
LDS1YAL018C YOR1P53049 1477 aa9.47□□□□□ -0.89
LDS1YAL018C RQC2Q12532 1038 aaKnown RBP9.47□□□□□ -0.89
LDS1YAL018C RKR1Q04781 1562 aa9.46□□□□□ -0.9
LDS1YAL018C CHD1P32657 1468 aa9.45□□□□□ -0.9
LDS1YAL018C UBP9P39967 754 aa9.43□□□□□ -0.9
LDS1YAL018C EPS1P40557 701 aa9.39□□□□□ -0.91
LDS1YAL018C MMS22Q06164 1454 aa9.38□□□□□ -0.91
LDS1YAL018C MYO4P32492 1471 aa9.37□□□□□ -0.91
LDS1YAL018C PAN1P32521 1480 aa9.37□□□□□ -0.91
LDS1YAL018C PTP3P40048 928 aa9.37□□□□□ -0.91
LDS1YAL018C BDF1P35817 686 aa9.35□□□□□ -0.91
LDS1YAL018C SPP41P38904 1435 aa9.35□□□□□ -0.91
LDS1YAL018C YIL055CP40523 627 aaKnown RBP9.35□□□□□ -0.91
LDS1YAL018C CDC25P04821 1589 aa9.34□□□□□ -0.91
LDS1YAL018C TAF7Q05021 590 aa9.33□□□□□ -0.92
LDS1YAL018C TSC11P40061 1430 aa9.3□□□□□ -0.92
LDS1YAL018C TRM732Q03496 1420 aa9.3□□□□□ -0.92
LDS1YAL018C STH1P32597 1359 aa9.29□□□□□ -0.92
LDS1YAL018C TY2B-LR1P0C2J3 1770 aa9.29□□□□□ -0.92
LDS1YAL018C TY2B-FP0CX63 1770 aa9.29□□□□□ -0.92
LDS1YAL018C TY2B-GR2P0CX64 1770 aa9.29□□□□□ -0.92
LDS1YAL018C TY2B-CP25384 1770 aa9.29□□□□□ -0.92
LDS1YAL018C TY2B-DR2Q03494 1770 aa9.29□□□□□ -0.92
LDS1YAL018C TY1B-DR1Q03855 1755 aa9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms