RNA–Protein interactions for RNA: YLR114C

AVL9, Transcript of Conserved protein involved in exocytic transport from the Golgi, yeastyeast

Gene AVL9, Length 2,295 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVL9YLR114C SML1Q04964 104 aa8.37□□□□□ -1.07
AVL9YLR114C SPP382Q06411 708 aaPredicted RBP8.37□□□□□ -1.07
AVL9YLR114C GIN4Q12263 1142 aa8.37□□□□□ -1.07
AVL9YLR114C STI1P15705 589 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
AVL9YLR114C RPG1P38249 964 aaKnown RBP8.37□□□□□ -1.07
AVL9YLR114C JJJ2P46997 583 aa8.37□□□□□ -1.07
AVL9YLR114C LYS4P49367 693 aaPredicted RBP8.37□□□□□ -1.07
AVL9YLR114C YOL098CQ12496 1037 aa8.37□□□□□ -1.07
AVL9YLR114C MIP6P38760 659 aaKnown RBP8.36□□□□□ -1.07
AVL9YLR114C STT3P39007 718 aaKnown RBP8.36□□□□□ -1.07
AVL9YLR114C RRB1Q04225 511 aaKnown RBP8.36□□□□□ -1.07
AVL9YLR114C IRC3Q06683 689 aa8.36□□□□□ -1.07
AVL9YLR114C WRS1Q12109 432 aaKnown RBP8.36□□□□□ -1.07
AVL9YLR114C MSH1P25846 959 aa8.36□□□□□ -1.07
AVL9YLR114C MCX1P38323 520 aaPredicted RBP8.36□□□□□ -1.07
AVL9YLR114C BUD16P39988 312 aa8.36□□□□□ -1.07
AVL9YLR114C SMC3P47037 1230 aa8.36□□□□□ -1.07
AVL9YLR114C UBX2Q04228 584 aa8.36□□□□□ -1.07
AVL9YLR114C FLO1P32768 1537 aa8.35□□□□□ -1.07
AVL9YLR114C PMD1P32634 1753 aa8.35□□□□□ -1.07
AVL9YLR114C SPB4P25808 606 aaPredicted RBP8.35□□□□□ -1.07
AVL9YLR114C PSO2P30620 661 aa8.35□□□□□ -1.07
AVL9YLR114C TOM71P38825 639 aaKnown RBP8.35□□□□□ -1.07
AVL9YLR114C THI6P41835 540 aa8.35□□□□□ -1.07
AVL9YLR114C VTC2P43585 828 aa8.35□□□□□ -1.07
AVL9YLR114C RET3P53600 189 aa8.35□□□□□ -1.07
AVL9YLR114C NSG2P53898 299 aa8.35□□□□□ -1.07
AVL9YLR114C TRS120Q04183 1289 aa8.35□□□□□ -1.07
AVL9YLR114C FOB1O13329 566 aa8.34□□□□□ -1.07
AVL9YLR114C THR4P16120 514 aaKnown RBP8.34□□□□□ -1.07
AVL9YLR114C CCT4P39078 528 aaKnown RBP8.34□□□□□ -1.07
AVL9YLR114C ATG3P40344 310 aa8.34□□□□□ -1.07
AVL9YLR114C SHQ1P40486 507 aaPredicted RBP8.34□□□□□ -1.07
AVL9YLR114C EFM4P40516 257 aa8.34□□□□□ -1.07
AVL9YLR114C HFM1P51979 1187 aa8.34□□□□□ -1.07
AVL9YLR114C YMR074CQ04773 145 aa8.34□□□□□ -1.07
AVL9YLR114C YLR287CQ05881 355 aa8.34□□□□□ -1.07
AVL9YLR114C DSE3Q08729 430 aa8.34□□□□□ -1.07
AVL9YLR114C NEW1Q08972 1196 aaKnown RBP8.34□□□□□ -1.07
AVL9YLR114C RRP6Q12149 733 aaKnown RBP8.34□□□□□ -1.07
AVL9YLR114C CIT1P00890 479 aa8.34□□□□□ -1.07
AVL9YLR114C RPL8BP29453 256 aaKnown RBP8.34□□□□□ -1.07
AVL9YLR114C ERG7P38604 731 aa8.34□□□□□ -1.07
AVL9YLR114C MVP1P40959 511 aaKnown RBP8.34□□□□□ -1.07
AVL9YLR114C YGR153WP48238 217 aa8.34□□□□□ -1.07
AVL9YLR114C HPC2Q01448 625 aa8.34□□□□□ -1.07
AVL9YLR114C VAC14Q06708 880 aa8.34□□□□□ -1.07
AVL9YLR114C TLG2Q08144 397 aa8.34□□□□□ -1.07
AVL9YLR114C SRP54P20424 541 aaKnown RBP8.33□□□□□ -1.08
AVL9YLR114C RPO26P20435 155 aa8.33□□□□□ -1.08
AVL9YLR114C CCT3P39077 534 aaKnown RBP8.33□□□□□ -1.08
AVL9YLR114C VPS8P39702 1274 aa8.33□□□□□ -1.08
AVL9YLR114C VFA1P40080 203 aa8.33□□□□□ -1.08
AVL9YLR114C YGR130CP53278 816 aa8.33□□□□□ -1.08
AVL9YLR114C MTF2P10849 440 aa8.33□□□□□ -1.08
AVL9YLR114C SPO12P17123 173 aa8.33□□□□□ -1.08
AVL9YLR114C UBP1P25037 809 aa8.33□□□□□ -1.08
AVL9YLR114C TIF4632P39936 914 aaKnown RBP8.33□□□□□ -1.08
AVL9YLR114C UBA2P52488 636 aa8.33□□□□□ -1.08
AVL9YLR114C UTP5Q04177 643 aaKnown RBP8.33□□□□□ -1.08
AVL9YLR114C YOL075CQ08234 1294 aa8.33□□□□□ -1.08
AVL9YLR114C SLK19Q08581 821 aaKnown RBP8.33□□□□□ -1.08
AVL9YLR114C HKR1P41809 1802 aa8.32□□□□□ -1.08
AVL9YLR114C MAK11P20484 414 aaKnown RBP8.32□□□□□ -1.08
AVL9YLR114C PFF1P38244 976 aa8.32□□□□□ -1.08
AVL9YLR114C CLF1Q12309 687 aaPredicted RBP8.32□□□□□ -1.08
AVL9YLR114C YAP5P40574 245 aa8.32□□□□□ -1.08
AVL9YLR114C APL6P46682 809 aa8.32□□□□□ -1.08
AVL9YLR114C MDM1Q01846 1127 aa8.32□□□□□ -1.08
AVL9YLR114C MRS2Q01926 470 aa8.32□□□□□ -1.08
AVL9YLR114C UME1Q03010 460 aa8.32□□□□□ -1.08
AVL9YLR114C GYL1Q04322 720 aa8.32□□□□□ -1.08
AVL9YLR114C ATG23Q06671 453 aa8.32□□□□□ -1.08
AVL9YLR114C TUF1P02992 437 aaKnown RBP8.31□□□□□ -1.08
AVL9YLR114C PRI1P10363 409 aa8.31□□□□□ -1.08
AVL9YLR114C DEP1P31385 405 aa8.31□□□□□ -1.08
AVL9YLR114C NGL3Q03210 505 aa8.31□□□□□ -1.08
AVL9YLR114C YAP7Q08182 245 aa8.31□□□□□ -1.08
AVL9YLR114C KEL3Q08979 651 aaPredicted RBP8.31□□□□□ -1.08
AVL9YLR114C CWC2Q12046 339 aaPredicted RBP8.31□□□□□ -1.08
AVL9YLR114C RAD57P25301 460 aa8.31□□□□□ -1.08
AVL9YLR114C BYE1P36106 594 aa8.31□□□□□ -1.08
AVL9YLR114C SMF1P38925 575 aa8.31□□□□□ -1.08
AVL9YLR114C VPS41P38959 992 aa8.31□□□□□ -1.08
AVL9YLR114C SDA1P53313 767 aaKnown RBP8.31□□□□□ -1.08
AVL9YLR114C OSH2Q12451 1283 aa8.31□□□□□ -1.08
AVL9YLR114C ARG82P07250 355 aa8.3□□□□□ -1.08
AVL9YLR114C PPR1P07272 904 aaPredicted RBP8.3□□□□□ -1.08
AVL9YLR114C RET1P22276 1149 aaKnown RBP8.3□□□□□ -1.08
AVL9YLR114C MUD2P36084 527 aaKnown RBP8.3□□□□□ -1.08
AVL9YLR114C PET10P36139 283 aa8.3□□□□□ -1.08
AVL9YLR114C SET4P42948 560 aa8.3□□□□□ -1.08
AVL9YLR114C CTK3P46963 296 aaPredicted RBP8.3□□□□□ -1.08
AVL9YLR114C PUS6P53294 404 aa8.3□□□□□ -1.08
AVL9YLR114C PRP42Q03776 544 aaKnown RBP8.3□□□□□ -1.08
AVL9YLR114C SMD2Q06217 110 aaKnown RBP8.3□□□□□ -1.08
AVL9YLR114C MIP1P15801 1254 aa8.29□□□□□ -1.08
AVL9YLR114C PDC6P26263 563 aaKnown RBP8.29□□□□□ -1.08
AVL9YLR114C SRB4P32569 687 aa8.29□□□□□ -1.08
AVL9YLR114C UGA2P38067 497 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms