Protein–RNA interactions for Protein: P32569

SRB4, Mediator of RNA polymerase II transcription subunit 17, yeastyeast

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRB4P32569 NSR1YGR159C 1245 nt21.68■■□□□ 1.06
SRB4P32569 YML009W-BYML009W-B 477 nt21.45■■□□□ 1.02
SRB4P32569 NOP1YDL014W 984 nt20.73■□□□□ 0.91
SRB4P32569 MDJ1YFL016C 1536 nt19.59■□□□□ 0.73
SRB4P32569 YKL036CYKL036C 393 nt18.74■□□□□ 0.59
SRB4P32569 YJL027CYJL027C 417 nt18.08■□□□□ 0.48
SRB4P32569 SRX1YKL086W 384 nt18.08■□□□□ 0.48
SRB4P32569 Q0297Q0297 156 nt17.99■□□□□ 0.47
SRB4P32569 DBP2YNL112W 1641 nt17.16■□□□□ 0.34
SRB4P32569 YCR051WYCR051W 669 nt17.13■□□□□ 0.33
SRB4P32569 YBR190WYBR190W 312 nt16.84■□□□□ 0.29
SRB4P32569 SCS3YGL126W 1143 nt16.82■□□□□ 0.28
SRB4P32569 TRN1tP(UGG)A 72 nt16.57■□□□□ 0.24
SRB4P32569 SUF9tP(UGG)F 72 nt16.57■□□□□ 0.24
SRB4P32569 SUF8tP(UGG)H 72 nt16.57■□□□□ 0.24
SRB4P32569 tP(UGG)LtP(UGG)L 72 nt16.57■□□□□ 0.24
SRB4P32569 SUF7tP(UGG)M 72 nt16.57■□□□□ 0.24
SRB4P32569 tP(UGG)N1tP(UGG)N1 72 nt16.57■□□□□ 0.24
SRB4P32569 tP(UGG)N2tP(UGG)N2 72 nt16.57■□□□□ 0.24
SRB4P32569 tP(UGG)O1tP(UGG)O1 72 nt16.57■□□□□ 0.24
SRB4P32569 SUF11tP(UGG)O2 72 nt16.57■□□□□ 0.24
SRB4P32569 RTC3YHR087W 336 nt16.45■□□□□ 0.22
SRB4P32569 CCC1YLR220W 969 nt16.42■□□□□ 0.22
SRB4P32569 YOL085CYOL085C 342 nt16.23■□□□□ 0.19
SRB4P32569 RPP1BYDL130W 321 nt16.15■□□□□ 0.18
SRB4P32569 RVS167YDR388W 1449 nt16.11■□□□□ 0.17
SRB4P32569 PKP1YIL042C 1185 nt16.01■□□□□ 0.15
SRB4P32569 SCJ1YMR214W 1134 nt15.87■□□□□ 0.13
SRB4P32569 PUT4YOR348C 1884 nt15.57■□□□□ 0.08
SRB4P32569 tP(UGG)O3tP(UGG)O3 72 nt15.56■□□□□ 0.08
SRB4P32569 PET122YER153C 765 nt15.45■□□□□ 0.06
SRB4P32569 SSA3YBL075C 1950 nt15.45■□□□□ 0.06
SRB4P32569 SHR5YOL110W 714 nt15.43■□□□□ 0.06
SRB4P32569 URN1YPR152C 1398 nt15.24■□□□□ 0.03
SRB4P32569 SCR1SCR1 522 nt15.22■□□□□ 0.03
SRB4P32569 ARE1YCR048W 1833 nt15.15■□□□□ 0.02
SRB4P32569 DEP1YAL013W 1218 nt15.11■□□□□ 0.01
SRB4P32569 OPI9YLR338W 858 nt15.1■□□□□ 0.01
SRB4P32569 SAH1YER043C 1350 nt15.1■□□□□ 0.01
SRB4P32569 YDJ1YNL064C 1230 nt15.07■□□□□ 0
SRB4P32569 POA1YBR022W 534 nt15.06■□□□□ 0
SRB4P32569 RRN5YLR141W 1092 nt14.98□□□□□ -0.01
SRB4P32569 YHR049C-AYHR049C-A 297 nt14.97□□□□□ -0.01
SRB4P32569 RPN10YHR200W 807 nt14.95□□□□□ -0.02
SRB4P32569 ATS1YAL020C 1002 nt14.94□□□□□ -0.02
SRB4P32569 YNL208WYNL208W 600 nt14.85□□□□□ -0.03
SRB4P32569 BSC6YOL137W 1494 nt14.8□□□□□ -0.04
SRB4P32569 GAR1YHR089C 618 nt14.78□□□□□ -0.04
SRB4P32569 YER088W-BYER088W-B 147 nt14.68□□□□□ -0.06
SRB4P32569 PUN1YLR414C 792 nt14.67□□□□□ -0.06
SRB4P32569 BUD23YCR047C 828 nt14.62□□□□□ -0.07
SRB4P32569 RSB1YOR049C 1065 nt14.56□□□□□ -0.08
SRB4P32569 PTC2YER089C 1395 nt14.55□□□□□ -0.08
SRB4P32569 YJR018WYJR018W 363 nt14.52□□□□□ -0.09
SRB4P32569 NAB2YGL122C 1578 nt14.43□□□□□ -0.1
SRB4P32569 SPT5YML010W 3192 nt14.36□□□□□ -0.11
SRB4P32569 TIR1YER011W 765 nt14.31□□□□□ -0.12
SRB4P32569 SSA1YAL005C 1929 nt14.19□□□□□ -0.14
SRB4P32569 YJR120WYJR120W 351 nt14.16□□□□□ -0.14
SRB4P32569 DAL1YIR027C 1383 nt14.15□□□□□ -0.14
SRB4P32569 RPP2BYDR382W 333 nt14.14□□□□□ -0.15
SRB4P32569 FIS1YIL065C 468 nt14.14□□□□□ -0.15
SRB4P32569 FPR4YLR449W 1179 nt14.12□□□□□ -0.15
SRB4P32569 INM2YDR287W 879 nt14.07□□□□□ -0.16
SRB4P32569 SSA4YER103W 1929 nt14.05□□□□□ -0.16
SRB4P32569 PHO4YFR034C 939 nt14□□□□□ -0.17
SRB4P32569 MEP2YNL142W 1500 nt13.94□□□□□ -0.18
SRB4P32569 PST2YDR032C 597 nt13.9□□□□□ -0.18
SRB4P32569 YPS1YLR120C 1710 nt13.87□□□□□ -0.19
SRB4P32569 SRB2YHR041C 633 nt13.85□□□□□ -0.19
SRB4P32569 YBL100CYBL100C 315 nt13.85□□□□□ -0.19
SRB4P32569 BDH2YAL061W 1254 nt13.77□□□□□ -0.21
SRB4P32569 YHR165W-AYHR165W-A 312 nt13.76□□□□□ -0.21
SRB4P32569 YDR095CYDR095C 411 nt13.72□□□□□ -0.21
SRB4P32569 DCW1YKL046C 1350 nt13.7□□□□□ -0.22
SRB4P32569 FUN26YAL022C 1554 nt13.67□□□□□ -0.22
SRB4P32569 WWM1YFL010C 636 nt13.6□□□□□ -0.23
SRB4P32569 TRM9YML014W 840 nt13.6□□□□□ -0.23
SRB4P32569 ALF1YNL148C 765 nt13.58□□□□□ -0.24
SRB4P32569 LSM3YLR438C-A 270 nt13.53□□□□□ -0.24
SRB4P32569 EMI2YDR516C 1503 nt13.53□□□□□ -0.24
SRB4P32569 BDF1YLR399C 2061 nt13.52□□□□□ -0.24
SRB4P32569 YMR090WYMR090W 684 nt13.51□□□□□ -0.25
SRB4P32569 RPP2AYOL039W 321 nt13.48□□□□□ -0.25
SRB4P32569 CCT6YDR188W 1641 nt13.46□□□□□ -0.25
SRB4P32569 PTP1YDL230W 1008 nt13.44□□□□□ -0.26
SRB4P32569 YGR021WYGR021W 873 nt13.43□□□□□ -0.26
SRB4P32569 SHU1YHL006C 453 nt13.42□□□□□ -0.26
SRB4P32569 CAC2YML102W 1407 nt13.4□□□□□ -0.26
SRB4P32569 YDL221WYDL221W 552 nt13.4□□□□□ -0.26
SRB4P32569 YFL021C-AYFL021C-A 855 nt13.4□□□□□ -0.26
SRB4P32569 SUF2tP(AGG)C 72 nt13.4□□□□□ -0.26
SRB4P32569 SUF10tP(AGG)N 72 nt13.4□□□□□ -0.26
SRB4P32569 YBR220CYBR220C 1683 nt13.39□□□□□ -0.27
SRB4P32569 SIS1YNL007C 1059 nt13.36□□□□□ -0.27
SRB4P32569 TAT1YBR069C 1860 nt13.34□□□□□ -0.27
SRB4P32569 YAL037C-BYAL037C-B 975 nt13.34□□□□□ -0.27
SRB4P32569 HOM6YJR139C 1080 nt13.33□□□□□ -0.28
SRB4P32569 SDH1YKL148C 1923 nt13.3□□□□□ -0.28
SRB4P32569 IRC15YPL017C 1500 nt13.2□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms