RNA–Protein interactions for RNA: YLR114C

AVL9, Transcript of Conserved protein involved in exocytic transport from the Golgi, yeastyeast

Gene AVL9, Length 2,295 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVL9YLR114C SGS1P35187 1447 aa13.03□□□□□ -0.32
AVL9YLR114C INO80P53115 1489 aa12.69□□□□□ -0.38
AVL9YLR114C SPA2P23201 1466 aaKnown RBP12.65□□□□□ -0.38
AVL9YLR114C SSN2P38931 1420 aa12.56□□□□□ -0.4
AVL9YLR114C TCB3Q03640 1545 aaKnown RBP12.42□□□□□ -0.42
AVL9YLR114C TY1B-DR4Q07793 1604 aa12.22□□□□□ -0.45
AVL9YLR114C DRS1P32892 752 aaKnown RBP12.18□□□□□ -0.46
AVL9YLR114C HSL1P34244 1518 aa12.06□□□□□ -0.48
AVL9YLR114C SPT6P23615 1451 aaKnown RBP12□□□□□ -0.49
AVL9YLR114C MON2P48563 1636 aaPredicted RBP11.94□□□□□ -0.5
AVL9YLR114C HIR3P47171 1648 aa11.86□□□□□ -0.51
AVL9YLR114C SWR1Q05471 1514 aa11.84□□□□□ -0.51
AVL9YLR114C XRN1P22147 1528 aaKnown RBP11.82□□□□□ -0.52
AVL9YLR114C REV3P14284 1504 aa11.66□□□□□ -0.54
AVL9YLR114C SIN3P22579 1536 aa11.61□□□□□ -0.55
AVL9YLR114C THO2P53552 1597 aaKnown RBP11.59□□□□□ -0.55
AVL9YLR114C SSK2P53599 1579 aa11.55□□□□□ -0.56
AVL9YLR114C TAF2P23255 1407 aa11.5□□□□□ -0.57
AVL9YLR114C SKI3P17883 1432 aaKnown RBP11.49□□□□□ -0.57
AVL9YLR114C CHD1P32657 1468 aa11.45□□□□□ -0.58
AVL9YLR114C ESP1Q03018 1630 aa11.43□□□□□ -0.58
AVL9YLR114C MYO2P19524 1574 aaKnown RBP11.4□□□□□ -0.59
AVL9YLR114C DNA2P38859 1522 aa11.38□□□□□ -0.59
AVL9YLR114C MMS22Q06164 1454 aa11.37□□□□□ -0.59
AVL9YLR114C KOG1P38873 1557 aa11.36□□□□□ -0.59
AVL9YLR114C BUD4P47136 1447 aa11.35□□□□□ -0.59
AVL9YLR114C POL1P13382 1468 aa11.32□□□□□ -0.6
AVL9YLR114C ATG2P53855 1592 aa11.3□□□□□ -0.6
AVL9YLR114C ECM5Q03214 1411 aa11.29□□□□□ -0.6
AVL9YLR114C YPK9Q12697 1472 aa11.28□□□□□ -0.6
AVL9YLR114C STU1P38198 1513 aa11.26□□□□□ -0.61
AVL9YLR114C YTA7P40340 1379 aa11.25□□□□□ -0.61
AVL9YLR114C PEP1P32319 1579 aa11.17□□□□□ -0.62
AVL9YLR114C BPT1P14772 1559 aa11.13□□□□□ -0.63
AVL9YLR114C SCC2Q04002 1493 aa11.13□□□□□ -0.63
AVL9YLR114C YOR1P53049 1477 aa11.12□□□□□ -0.63
AVL9YLR114C RKR1Q04781 1562 aa11.11□□□□□ -0.63
AVL9YLR114C MDS3P53094 1487 aa11.11□□□□□ -0.63
AVL9YLR114C RPO31P04051 1460 aa11.1□□□□□ -0.63
AVL9YLR114C SAS10Q12136 610 aaPredicted RBP11.09□□□□□ -0.63
AVL9YLR114C MYO4P32492 1471 aa11.07□□□□□ -0.64
AVL9YLR114C TOP2P06786 1428 aaKnown RBP11.06□□□□□ -0.64
AVL9YLR114C SMC4Q12267 1418 aa11.03□□□□□ -0.64
AVL9YLR114C YCF1P39109 1515 aaKnown RBP11□□□□□ -0.65
AVL9YLR114C UFD4P33202 1483 aa11□□□□□ -0.65
AVL9YLR114C TRM732Q03496 1420 aa10.99□□□□□ -0.65
AVL9YLR114C TAF7Q05021 590 aa10.95□□□□□ -0.66
AVL9YLR114C IKI3Q06706 1349 aaKnown RBP10.95□□□□□ -0.66
AVL9YLR114C RSE1Q04693 1361 aaKnown RBP10.94□□□□□ -0.66
AVL9YLR114C SNQ2P32568 1501 aaKnown RBP10.92□□□□□ -0.66
AVL9YLR114C TY2B-LR1P0C2J3 1770 aa10.92□□□□□ -0.66
AVL9YLR114C TY2B-FP0CX63 1770 aa10.92□□□□□ -0.66
AVL9YLR114C TY2B-GR2P0CX64 1770 aa10.92□□□□□ -0.66
AVL9YLR114C TY2B-CP25384 1770 aa10.92□□□□□ -0.66
AVL9YLR114C TY2B-DR2Q03494 1770 aa10.92□□□□□ -0.66
AVL9YLR114C TY1B-DR1Q03855 1755 aa10.92□□□□□ -0.66
AVL9YLR114C TY2B-DR3Q07791 1770 aaKnown RBP10.92□□□□□ -0.66
AVL9YLR114C TY2B-OR1Q12113 1770 aa10.92□□□□□ -0.66
AVL9YLR114C TY2B-DR1Q12472 1770 aa10.92□□□□□ -0.66
AVL9YLR114C TY2B-OR2Q12501 1770 aa10.92□□□□□ -0.66
AVL9YLR114C STH1P32597 1359 aa10.91□□□□□ -0.66
AVL9YLR114C TY1B-DR3Q99231 1755 aa10.9□□□□□ -0.66
AVL9YLR114C TY2B-BQ12491 1770 aa10.84□□□□□ -0.67
AVL9YLR114C NUP170P38181 1502 aa10.82□□□□□ -0.68
AVL9YLR114C MLP2P40457 1679 aa10.79□□□□□ -0.68
AVL9YLR114C PDR15Q04182 1529 aaKnown RBP10.79□□□□□ -0.68
AVL9YLR114C SPP41P38904 1435 aa10.79□□□□□ -0.68
AVL9YLR114C GEA1P47102 1408 aaPredicted RBP10.77□□□□□ -0.69
AVL9YLR114C SSM4P40318 1319 aa10.76□□□□□ -0.69
AVL9YLR114C TY1B-HO13535 1793 aa10.75□□□□□ -0.69
AVL9YLR114C TY1B-DR5P0C2I2 1755 aa10.75□□□□□ -0.69
AVL9YLR114C TY1B-DR6P0C2I3 1755 aa10.75□□□□□ -0.69
AVL9YLR114C TY1B-LR2P0C2I5 1755 aa10.75□□□□□ -0.69
AVL9YLR114C TY1B-LR3P0C2I6 1755 aaKnown RBP10.75□□□□□ -0.69
AVL9YLR114C TY1B-PR1P0C2I9 1755 aaKnown RBP10.75□□□□□ -0.69
AVL9YLR114C TY1B-PR2P0C2J0 1756 aa10.75□□□□□ -0.69
AVL9YLR114C TY1B-PR3P0C2J1 1755 aaKnown RBP10.75□□□□□ -0.69
AVL9YLR114C TY1B-JR1P47098 1755 aa10.75□□□□□ -0.69
AVL9YLR114C TY1B-ML2Q03434 1755 aaKnown RBP10.75□□□□□ -0.69
AVL9YLR114C TY1B-ER1Q03612 1755 aa10.75□□□□□ -0.69
AVL9YLR114C TY1B-ML1Q04711 1755 aaKnown RBP10.75□□□□□ -0.69
AVL9YLR114C TY1B-GR2Q12269 1755 aa10.75□□□□□ -0.69
AVL9YLR114C TY1B-OLQ12273 1755 aa10.75□□□□□ -0.69
AVL9YLR114C TY1B-PLQ12414 1755 aaKnown RBP10.75□□□□□ -0.69
AVL9YLR114C IFH1P39520 1085 aa10.74□□□□□ -0.69
AVL9YLR114C TY1B-BRQ12193 1756 aa10.73□□□□□ -0.69
AVL9YLR114C TY1B-GR3Q12316 1755 aa10.73□□□□□ -0.69
AVL9YLR114C TY1B-ORQ92393 1755 aa10.73□□□□□ -0.69
AVL9YLR114C ULS1Q08562 1619 aa10.72□□□□□ -0.69
AVL9YLR114C TSC11P40061 1430 aa10.72□□□□□ -0.69
AVL9YLR114C VTH1P40438 1549 aa10.69□□□□□ -0.7
AVL9YLR114C VTH2P40890 1549 aa10.69□□□□□ -0.7
AVL9YLR114C RQC2Q12532 1038 aaKnown RBP10.67□□□□□ -0.7
AVL9YLR114C SNT2P53127 1403 aa10.67□□□□□ -0.7
AVL9YLR114C CDC25P04821 1589 aa10.65□□□□□ -0.7
AVL9YLR114C PAN1P32521 1480 aa10.63□□□□□ -0.71
AVL9YLR114C TY3B-GQ99315 1547 aa10.63□□□□□ -0.71
AVL9YLR114C TY1B-JR2P47100 1755 aaKnown RBP10.59□□□□□ -0.71
AVL9YLR114C TY1B-ER2Q03619 1755 aa10.59□□□□□ -0.71
AVL9YLR114C TY1B-MR1Q04214 1755 aa10.59□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms