Protein–RNA interactions for Protein: P40344

ATG3, Autophagy-related protein 3, yeastyeast

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG3P40344 NSR1YGR159C 1245 nt21.89■■□□□ 1.09
ATG3P40344 YML009W-BYML009W-B 477 nt21.77■■□□□ 1.08
ATG3P40344 NOP1YDL014W 984 nt20.96■□□□□ 0.95
ATG3P40344 MDJ1YFL016C 1536 nt19.85■□□□□ 0.77
ATG3P40344 YKL036CYKL036C 393 nt19.07■□□□□ 0.64
ATG3P40344 SRX1YKL086W 384 nt18.35■□□□□ 0.53
ATG3P40344 Q0297Q0297 156 nt18.29■□□□□ 0.52
ATG3P40344 YJL027CYJL027C 417 nt18.21■□□□□ 0.51
ATG3P40344 DBP2YNL112W 1641 nt17.45■□□□□ 0.38
ATG3P40344 YCR051WYCR051W 669 nt17.38■□□□□ 0.37
ATG3P40344 SCS3YGL126W 1143 nt17.24■□□□□ 0.35
ATG3P40344 YBR190WYBR190W 312 nt16.94■□□□□ 0.3
ATG3P40344 TRN1tP(UGG)A 72 nt16.84■□□□□ 0.29
ATG3P40344 SUF9tP(UGG)F 72 nt16.84■□□□□ 0.29
ATG3P40344 SUF8tP(UGG)H 72 nt16.84■□□□□ 0.29
ATG3P40344 tP(UGG)LtP(UGG)L 72 nt16.84■□□□□ 0.29
ATG3P40344 SUF7tP(UGG)M 72 nt16.84■□□□□ 0.29
ATG3P40344 tP(UGG)N1tP(UGG)N1 72 nt16.84■□□□□ 0.29
ATG3P40344 tP(UGG)N2tP(UGG)N2 72 nt16.84■□□□□ 0.29
ATG3P40344 tP(UGG)O1tP(UGG)O1 72 nt16.84■□□□□ 0.29
ATG3P40344 SUF11tP(UGG)O2 72 nt16.84■□□□□ 0.29
ATG3P40344 CCC1YLR220W 969 nt16.64■□□□□ 0.25
ATG3P40344 YOL085CYOL085C 342 nt16.56■□□□□ 0.24
ATG3P40344 RTC3YHR087W 336 nt16.53■□□□□ 0.24
ATG3P40344 RPP1BYDL130W 321 nt16.41■□□□□ 0.22
ATG3P40344 PKP1YIL042C 1185 nt16.36■□□□□ 0.21
ATG3P40344 SCJ1YMR214W 1134 nt16.2■□□□□ 0.18
ATG3P40344 RVS167YDR388W 1449 nt16.19■□□□□ 0.18
ATG3P40344 tP(UGG)O3tP(UGG)O3 72 nt15.79■□□□□ 0.12
ATG3P40344 PET122YER153C 765 nt15.76■□□□□ 0.11
ATG3P40344 PUT4YOR348C 1884 nt15.71■□□□□ 0.11
ATG3P40344 SHR5YOL110W 714 nt15.6■□□□□ 0.09
ATG3P40344 SSA3YBL075C 1950 nt15.47■□□□□ 0.07
ATG3P40344 SCR1SCR1 522 nt15.4■□□□□ 0.06
ATG3P40344 URN1YPR152C 1398 nt15.38■□□□□ 0.05
ATG3P40344 Q0182Q0182 405 nt15.33■□□□□ 0.04
ATG3P40344 ARE1YCR048W 1833 nt15.33■□□□□ 0.04
ATG3P40344 DEP1YAL013W 1218 nt15.31■□□□□ 0.04
ATG3P40344 ATS1YAL020C 1002 nt15.28■□□□□ 0.04
ATG3P40344 YDJ1YNL064C 1230 nt15.26■□□□□ 0.03
ATG3P40344 SAH1YER043C 1350 nt15.24■□□□□ 0.03
ATG3P40344 RRN5YLR141W 1092 nt15.24■□□□□ 0.03
ATG3P40344 OPI9YLR338W 858 nt15.24■□□□□ 0.03
ATG3P40344 POA1YBR022W 534 nt15.16■□□□□ 0.02
ATG3P40344 YHR049C-AYHR049C-A 297 nt15.12■□□□□ 0.01
ATG3P40344 RPN10YHR200W 807 nt15.02■□□□□ -0
ATG3P40344 MOT3YMR070W 1473 nt15□□□□□ -0.01
ATG3P40344 GAR1YHR089C 618 nt14.99□□□□□ -0.01
ATG3P40344 YNL208WYNL208W 600 nt14.98□□□□□ -0.01
ATG3P40344 YER088W-BYER088W-B 147 nt14.95□□□□□ -0.02
ATG3P40344 BSC6YOL137W 1494 nt14.91□□□□□ -0.02
ATG3P40344 RSB1YOR049C 1065 nt14.81□□□□□ -0.04
ATG3P40344 PUN1YLR414C 792 nt14.75□□□□□ -0.05
ATG3P40344 BUD23YCR047C 828 nt14.7□□□□□ -0.06
ATG3P40344 PTC2YER089C 1395 nt14.67□□□□□ -0.06
ATG3P40344 YJR018WYJR018W 363 nt14.64□□□□□ -0.07
ATG3P40344 SPT5YML010W 3192 nt14.54□□□□□ -0.08
ATG3P40344 TIR1YER011W 765 nt14.51□□□□□ -0.09
ATG3P40344 NAB2YGL122C 1578 nt14.5□□□□□ -0.09
ATG3P40344 YJR120WYJR120W 351 nt14.46□□□□□ -0.09
ATG3P40344 SSA1YAL005C 1929 nt14.45□□□□□ -0.1
ATG3P40344 FIS1YIL065C 468 nt14.36□□□□□ -0.11
ATG3P40344 DAL1YIR027C 1383 nt14.26□□□□□ -0.13
ATG3P40344 PST2YDR032C 597 nt14.23□□□□□ -0.13
ATG3P40344 SRB2YHR041C 633 nt14.23□□□□□ -0.13
ATG3P40344 RPP2BYDR382W 333 nt14.2□□□□□ -0.14
ATG3P40344 FPR4YLR449W 1179 nt14.2□□□□□ -0.14
ATG3P40344 PHO4YFR034C 939 nt14.16□□□□□ -0.14
ATG3P40344 SSA4YER103W 1929 nt14.12□□□□□ -0.15
ATG3P40344 INM2YDR287W 879 nt14.12□□□□□ -0.15
ATG3P40344 MEP2YNL142W 1500 nt14.02□□□□□ -0.16
ATG3P40344 YPS1YLR120C 1710 nt14□□□□□ -0.17
ATG3P40344 YBL100CYBL100C 315 nt13.98□□□□□ -0.17
ATG3P40344 BDH2YAL061W 1254 nt13.92□□□□□ -0.18
ATG3P40344 YDR095CYDR095C 411 nt13.86□□□□□ -0.19
ATG3P40344 DCW1YKL046C 1350 nt13.84□□□□□ -0.19
ATG3P40344 WWM1YFL010C 636 nt13.84□□□□□ -0.19
ATG3P40344 YHR165W-AYHR165W-A 312 nt13.82□□□□□ -0.2
ATG3P40344 FUN26YAL022C 1554 nt13.81□□□□□ -0.2
ATG3P40344 SHU1YHL006C 453 nt13.76□□□□□ -0.21
ATG3P40344 TRM9YML014W 840 nt13.67□□□□□ -0.22
ATG3P40344 YAL037C-BYAL037C-B 975 nt13.66□□□□□ -0.22
ATG3P40344 LSM3YLR438C-A 270 nt13.64□□□□□ -0.23
ATG3P40344 ALF1YNL148C 765 nt13.63□□□□□ -0.23
ATG3P40344 BDF1YLR399C 2061 nt13.63□□□□□ -0.23
ATG3P40344 PTP1YDL230W 1008 nt13.62□□□□□ -0.23
ATG3P40344 EMI2YDR516C 1503 nt13.61□□□□□ -0.23
ATG3P40344 CCT6YDR188W 1641 nt13.61□□□□□ -0.23
ATG3P40344 YGR021WYGR021W 873 nt13.6□□□□□ -0.23
ATG3P40344 YGR139WYGR139W 339 nt13.59□□□□□ -0.23
ATG3P40344 YFL021C-AYFL021C-A 855 nt13.58□□□□□ -0.24
ATG3P40344 HOM6YJR139C 1080 nt13.58□□□□□ -0.24
ATG3P40344 RPP2AYOL039W 321 nt13.57□□□□□ -0.24
ATG3P40344 CAC2YML102W 1407 nt13.56□□□□□ -0.24
ATG3P40344 NME1NME1 340 nt13.52□□□□□ -0.25
ATG3P40344 MNP1YGL068W 585 nt13.51□□□□□ -0.25
ATG3P40344 YDL221WYDL221W 552 nt13.49□□□□□ -0.25
ATG3P40344 SIS1YNL007C 1059 nt13.49□□□□□ -0.25
ATG3P40344 YBR220CYBR220C 1683 nt13.49□□□□□ -0.25
ATG3P40344 SUF2tP(AGG)C 72 nt13.45□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms