Protein–RNA interactions for Protein: P31385

DEP1, Transcriptional regulatory protein DEP1, yeastyeast

Predictions only

Length 405 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEP1P31385 NSR1YGR159C 1245 nt20.18■□□□□ 0.82
DEP1P31385 YML009W-BYML009W-B 477 nt19.43■□□□□ 0.7
DEP1P31385 MDJ1YFL016C 1536 nt18.77■□□□□ 0.6
DEP1P31385 NOP1YDL014W 984 nt18.62■□□□□ 0.57
DEP1P31385 YJL027CYJL027C 417 nt17.23■□□□□ 0.35
DEP1P31385 SSA3YBL075C 1950 nt16.86■□□□□ 0.29
DEP1P31385 YKL036CYKL036C 393 nt16.85■□□□□ 0.29
DEP1P31385 YBR190WYBR190W 312 nt16.28■□□□□ 0.2
DEP1P31385 DBP2YNL112W 1641 nt16.27■□□□□ 0.2
DEP1P31385 SRX1YKL086W 384 nt16.2■□□□□ 0.18
DEP1P31385 Q0297Q0297 156 nt16.12■□□□□ 0.17
DEP1P31385 RTC3YHR087W 336 nt15.82■□□□□ 0.12
DEP1P31385 PUT4YOR348C 1884 nt15.52■□□□□ 0.08
DEP1P31385 YCR051WYCR051W 669 nt15.33■□□□□ 0.04
DEP1P31385 TRN1tP(UGG)A 72 nt15.2■□□□□ 0.02
DEP1P31385 SUF9tP(UGG)F 72 nt15.2■□□□□ 0.02
DEP1P31385 SUF8tP(UGG)H 72 nt15.2■□□□□ 0.02
DEP1P31385 tP(UGG)LtP(UGG)L 72 nt15.2■□□□□ 0.02
DEP1P31385 SUF7tP(UGG)M 72 nt15.2■□□□□ 0.02
DEP1P31385 tP(UGG)N1tP(UGG)N1 72 nt15.2■□□□□ 0.02
DEP1P31385 tP(UGG)N2tP(UGG)N2 72 nt15.2■□□□□ 0.02
DEP1P31385 tP(UGG)O1tP(UGG)O1 72 nt15.2■□□□□ 0.02
DEP1P31385 SUF11tP(UGG)O2 72 nt15.2■□□□□ 0.02
DEP1P31385 SCS3YGL126W 1143 nt15.09■□□□□ 0.01
DEP1P31385 RVS167YDR388W 1449 nt15.03■□□□□ -0
DEP1P31385 CCC1YLR220W 969 nt15.01□□□□□ -0.01
DEP1P31385 ARE1YCR048W 1833 nt14.94□□□□□ -0.02
DEP1P31385 POA1YBR022W 534 nt14.94□□□□□ -0.02
DEP1P31385 SPT5YML010W 3192 nt14.91□□□□□ -0.02
DEP1P31385 SSA4YER103W 1929 nt14.8□□□□□ -0.04
DEP1P31385 BSC6YOL137W 1494 nt14.8□□□□□ -0.04
DEP1P31385 SCJ1YMR214W 1134 nt14.78□□□□□ -0.04
DEP1P31385 YHR049C-AYHR049C-A 297 nt14.72□□□□□ -0.05
DEP1P31385 SAH1YER043C 1350 nt14.62□□□□□ -0.07
DEP1P31385 YOL085CYOL085C 342 nt14.54□□□□□ -0.08
DEP1P31385 URN1YPR152C 1398 nt14.48□□□□□ -0.09
DEP1P31385 OPI9YLR338W 858 nt14.48□□□□□ -0.09
DEP1P31385 RPP1BYDL130W 321 nt14.46□□□□□ -0.09
DEP1P31385 BDF1YLR399C 2061 nt14.37□□□□□ -0.11
DEP1P31385 PKP1YIL042C 1185 nt14.31□□□□□ -0.12
DEP1P31385 SHR5YOL110W 714 nt14.31□□□□□ -0.12
DEP1P31385 BUD23YCR047C 828 nt14.29□□□□□ -0.12
DEP1P31385 DEP1YAL013W 1218 nt14.19□□□□□ -0.14
DEP1P31385 TAT1YBR069C 1860 nt14.14□□□□□ -0.15
DEP1P31385 tP(UGG)O3tP(UGG)O3 72 nt14.07□□□□□ -0.16
DEP1P31385 PUN1YLR414C 792 nt14.04□□□□□ -0.16
DEP1P31385 PTC2YER089C 1395 nt14.04□□□□□ -0.16
DEP1P31385 RPN10YHR200W 807 nt14.03□□□□□ -0.16
DEP1P31385 PAC11YDR488C 1602 nt14.01□□□□□ -0.17
DEP1P31385 MEP2YNL142W 1500 nt14□□□□□ -0.17
DEP1P31385 NAB2YGL122C 1578 nt14□□□□□ -0.17
DEP1P31385 YNL208WYNL208W 600 nt13.89□□□□□ -0.19
DEP1P31385 PET122YER153C 765 nt13.8□□□□□ -0.2
DEP1P31385 YJR018WYJR018W 363 nt13.76□□□□□ -0.21
DEP1P31385 DCW1YKL046C 1350 nt13.75□□□□□ -0.21
DEP1P31385 SCR1SCR1 522 nt13.71□□□□□ -0.21
DEP1P31385 FIS1YIL065C 468 nt13.69□□□□□ -0.22
DEP1P31385 NVJ2YPR091C 2313 nt13.67□□□□□ -0.22
DEP1P31385 YBR220CYBR220C 1683 nt13.64□□□□□ -0.23
DEP1P31385 YDJ1YNL064C 1230 nt13.63□□□□□ -0.23
DEP1P31385 DAL1YIR027C 1383 nt13.62□□□□□ -0.23
DEP1P31385 YPS1YLR120C 1710 nt13.58□□□□□ -0.24
DEP1P31385 EMI2YDR516C 1503 nt13.54□□□□□ -0.24
DEP1P31385 FPR4YLR449W 1179 nt13.53□□□□□ -0.24
DEP1P31385 YMR090WYMR090W 684 nt13.51□□□□□ -0.25
DEP1P31385 PHO4YFR034C 939 nt13.49□□□□□ -0.25
DEP1P31385 YHR165W-AYHR165W-A 312 nt13.46□□□□□ -0.25
DEP1P31385 GAR1YHR089C 618 nt13.45□□□□□ -0.26
DEP1P31385 ATS1YAL020C 1002 nt13.43□□□□□ -0.26
DEP1P31385 FPS1YLL043W 2010 nt13.42□□□□□ -0.26
DEP1P31385 INM2YDR287W 879 nt13.4□□□□□ -0.26
DEP1P31385 SDH1YKL148C 1923 nt13.39□□□□□ -0.27
DEP1P31385 YJR120WYJR120W 351 nt13.38□□□□□ -0.27
DEP1P31385 RRN5YLR141W 1092 nt13.38□□□□□ -0.27
DEP1P31385 PCH2YBR186W 1695 nt13.37□□□□□ -0.27
DEP1P31385 YDL221WYDL221W 552 nt13.37□□□□□ -0.27
DEP1P31385 GUT2YIL155C 1950 nt13.35□□□□□ -0.27
DEP1P31385 YDR095CYDR095C 411 nt13.34□□□□□ -0.27
DEP1P31385 SEC11YIR022W 504 nt13.27□□□□□ -0.29
DEP1P31385 CAC2YML102W 1407 nt13.22□□□□□ -0.29
DEP1P31385 RPP2BYDR382W 333 nt13.21□□□□□ -0.29
DEP1P31385 PTP1YDL230W 1008 nt13.17□□□□□ -0.3
DEP1P31385 SCC4YER147C 1875 nt13.16□□□□□ -0.3
DEP1P31385 PIB2YGL023C 1908 nt13.15□□□□□ -0.3
DEP1P31385 SSA1YAL005C 1929 nt13.1□□□□□ -0.31
DEP1P31385 YER088W-BYER088W-B 147 nt13.1□□□□□ -0.31
DEP1P31385 YBL100CYBL100C 315 nt13.1□□□□□ -0.31
DEP1P31385 RPP2AYOL039W 321 nt13.09□□□□□ -0.31
DEP1P31385 RSB1YOR049C 1065 nt13.06□□□□□ -0.32
DEP1P31385 TIR1YER011W 765 nt13.05□□□□□ -0.32
DEP1P31385 IRC15YPL017C 1500 nt13.03□□□□□ -0.32
DEP1P31385 GIS3YLR094C 1509 nt12.98□□□□□ -0.33
DEP1P31385 YSC84YHR016C 1407 nt12.96□□□□□ -0.34
DEP1P31385 RTF1YGL244W 1677 nt12.95□□□□□ -0.34
DEP1P31385 FUN26YAL022C 1554 nt12.93□□□□□ -0.34
DEP1P31385 ALF1YNL148C 765 nt12.91□□□□□ -0.34
DEP1P31385 YHL050CYHL050C 2094 nt12.89□□□□□ -0.35
DEP1P31385 BDH2YAL061W 1254 nt12.81□□□□□ -0.36
DEP1P31385 PTK1YKL198C 1989 nt12.8□□□□□ -0.36
DEP1P31385 SIS1YNL007C 1059 nt12.79□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms