Protein–RNA interactions for Protein: Q03776

PRP42, U1 small nuclear ribonucleoprotein component PRP42, yeastyeast

Known RBP Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP42Q03776 YML009W-BYML009W-B 477 nt24.55■■□□□ 1.52
PRP42Q03776 NOP1YDL014W 984 nt24.04■■□□□ 1.44
PRP42Q03776 NSR1YGR159C 1245 nt23.99■■□□□ 1.43
PRP42Q03776 YKL036CYKL036C 393 nt22.59■■□□□ 1.21
PRP42Q03776 YJL027CYJL027C 417 nt21.19■□□□□ 0.98
PRP42Q03776 Q0297Q0297 156 nt21.17■□□□□ 0.98
PRP42Q03776 SRX1YKL086W 384 nt20.99■□□□□ 0.95
PRP42Q03776 MDJ1YFL016C 1536 nt20.89■□□□□ 0.94
PRP42Q03776 SCS3YGL126W 1143 nt20.78■□□□□ 0.92
PRP42Q03776 YCR051WYCR051W 669 nt19.99■□□□□ 0.79
PRP42Q03776 YOL085CYOL085C 342 nt19.56■□□□□ 0.72
PRP42Q03776 PKP1YIL042C 1185 nt19.24■□□□□ 0.67
PRP42Q03776 RPP1BYDL130W 321 nt19.01■□□□□ 0.63
PRP42Q03776 SCJ1YMR214W 1134 nt18.95■□□□□ 0.62
PRP42Q03776 ATS1YAL020C 1002 nt18.73■□□□□ 0.59
PRP42Q03776 TRN1tP(UGG)A 72 nt18.7■□□□□ 0.58
PRP42Q03776 SUF9tP(UGG)F 72 nt18.7■□□□□ 0.58
PRP42Q03776 SUF8tP(UGG)H 72 nt18.7■□□□□ 0.58
PRP42Q03776 tP(UGG)LtP(UGG)L 72 nt18.7■□□□□ 0.58
PRP42Q03776 SUF7tP(UGG)M 72 nt18.7■□□□□ 0.58
PRP42Q03776 tP(UGG)N1tP(UGG)N1 72 nt18.7■□□□□ 0.58
PRP42Q03776 tP(UGG)N2tP(UGG)N2 72 nt18.7■□□□□ 0.58
PRP42Q03776 tP(UGG)O1tP(UGG)O1 72 nt18.7■□□□□ 0.58
PRP42Q03776 SUF11tP(UGG)O2 72 nt18.7■□□□□ 0.58
PRP42Q03776 DBP2YNL112W 1641 nt18.65■□□□□ 0.58
PRP42Q03776 CCC1YLR220W 969 nt18.59■□□□□ 0.57
PRP42Q03776 PET122YER153C 765 nt18.11■□□□□ 0.49
PRP42Q03776 SCR1SCR1 522 nt18.05■□□□□ 0.48
PRP42Q03776 tP(UGG)O3tP(UGG)O3 72 nt17.86■□□□□ 0.45
PRP42Q03776 YBR190WYBR190W 312 nt17.68■□□□□ 0.42
PRP42Q03776 RVS167YDR388W 1449 nt17.65■□□□□ 0.42
PRP42Q03776 RRN5YLR141W 1092 nt17.65■□□□□ 0.42
PRP42Q03776 RSB1YOR049C 1065 nt17.42■□□□□ 0.38
PRP42Q03776 RTC3YHR087W 336 nt17.36■□□□□ 0.37
PRP42Q03776 YER088W-BYER088W-B 147 nt17.3■□□□□ 0.36
PRP42Q03776 PST2YDR032C 597 nt17.26■□□□□ 0.35
PRP42Q03776 YDJ1YNL064C 1230 nt17.26■□□□□ 0.35
PRP42Q03776 SHR5YOL110W 714 nt17.13■□□□□ 0.33
PRP42Q03776 GAR1YHR089C 618 nt16.84■□□□□ 0.29
PRP42Q03776 YKL097CYKL097C 411 nt16.82■□□□□ 0.28
PRP42Q03776 DEP1YAL013W 1218 nt16.54■□□□□ 0.24
PRP42Q03776 SHU1YHL006C 453 nt16.46■□□□□ 0.23
PRP42Q03776 URN1YPR152C 1398 nt16.39■□□□□ 0.21
PRP42Q03776 YNL208WYNL208W 600 nt16.3■□□□□ 0.2
PRP42Q03776 TIR1YER011W 765 nt16.24■□□□□ 0.19
PRP42Q03776 RPN10YHR200W 807 nt16.24■□□□□ 0.19
PRP42Q03776 YAL037C-BYAL037C-B 975 nt16.11■□□□□ 0.17
PRP42Q03776 OPI9YLR338W 858 nt16.05■□□□□ 0.16
PRP42Q03776 YOR139CYOR139C 393 nt16.05■□□□□ 0.16
PRP42Q03776 SSA1YAL005C 1929 nt15.96■□□□□ 0.14
PRP42Q03776 SAH1YER043C 1350 nt15.85■□□□□ 0.13
PRP42Q03776 NPL3YDR432W 1245 nt15.84■□□□□ 0.13
PRP42Q03776 SRB2YHR041C 633 nt15.77■□□□□ 0.12
PRP42Q03776 PUT4YOR348C 1884 nt15.7■□□□□ 0.1
PRP42Q03776 YJR018WYJR018W 363 nt15.67■□□□□ 0.1
PRP42Q03776 YGR021WYGR021W 873 nt15.63■□□□□ 0.09
PRP42Q03776 WWM1YFL010C 636 nt15.61■□□□□ 0.09
PRP42Q03776 MNP1YGL068W 585 nt15.61■□□□□ 0.09
PRP42Q03776 HOM6YJR139C 1080 nt15.6■□□□□ 0.09
PRP42Q03776 PUN1YLR414C 792 nt15.58■□□□□ 0.08
PRP42Q03776 ARE1YCR048W 1833 nt15.57■□□□□ 0.08
PRP42Q03776 YOL037CYOL037C 354 nt15.5■□□□□ 0.07
PRP42Q03776 YJR120WYJR120W 351 nt15.49■□□□□ 0.07
PRP42Q03776 RPP2BYDR382W 333 nt15.47■□□□□ 0.07
PRP42Q03776 tM(CAU)CtM(CAU)C 72 nt15.41■□□□□ 0.06
PRP42Q03776 IMT4tM(CAU)E 72 nt15.41■□□□□ 0.06
PRP42Q03776 IMT3tM(CAU)J3 72 nt15.41■□□□□ 0.06
PRP42Q03776 IMT1tM(CAU)O1 72 nt15.41■□□□□ 0.06
PRP42Q03776 IMT2tM(CAU)P 72 nt15.41■□□□□ 0.06
PRP42Q03776 RKM5YLR137W 1104 nt15.38■□□□□ 0.05
PRP42Q03776 YHR049C-AYHR049C-A 297 nt15.37■□□□□ 0.05
PRP42Q03776 PTC2YER089C 1395 nt15.34■□□□□ 0.05
PRP42Q03776 YFL021C-AYFL021C-A 855 nt15.33■□□□□ 0.04
PRP42Q03776 POA1YBR022W 534 nt15.28■□□□□ 0.04
PRP42Q03776 BDH2YAL061W 1254 nt15.23■□□□□ 0.03
PRP42Q03776 SSA3YBL075C 1950 nt15.21■□□□□ 0.03
PRP42Q03776 PUS2YGL063W 1113 nt15.16■□□□□ 0.02
PRP42Q03776 YLR281CYLR281C 468 nt15.13■□□□□ 0.01
PRP42Q03776 LSM3YLR438C-A 270 nt15.12■□□□□ 0.01
PRP42Q03776 BUD23YCR047C 828 nt15.08■□□□□ 0
PRP42Q03776 NAB2YGL122C 1578 nt15.07■□□□□ 0
PRP42Q03776 INM2YDR287W 879 nt15.05■□□□□ -0
PRP42Q03776 WHI5YOR083W 888 nt15.02■□□□□ -0
PRP42Q03776 YBL100CYBL100C 315 nt14.98□□□□□ -0.01
PRP42Q03776 MOT3YMR070W 1473 nt14.97□□□□□ -0.01
PRP42Q03776 FPR4YLR449W 1179 nt14.97□□□□□ -0.01
PRP42Q03776 DAL1YIR027C 1383 nt14.96□□□□□ -0.02
PRP42Q03776 TRM9YML014W 840 nt14.89□□□□□ -0.03
PRP42Q03776 FIS1YIL065C 468 nt14.86□□□□□ -0.03
PRP42Q03776 BSC6YOL137W 1494 nt14.86□□□□□ -0.03
PRP42Q03776 FUN26YAL022C 1554 nt14.82□□□□□ -0.04
PRP42Q03776 PHO4YFR034C 939 nt14.8□□□□□ -0.04
PRP42Q03776 FMP45YDL222C 930 nt14.76□□□□□ -0.05
PRP42Q03776 DSK2YMR276W 1122 nt14.75□□□□□ -0.05
PRP42Q03776 YPR011CYPR011C 981 nt14.75□□□□□ -0.05
PRP42Q03776 YLR154C-GYLR154C-G 150 nt14.69□□□□□ -0.06
PRP42Q03776 CCT6YDR188W 1641 nt14.69□□□□□ -0.06
PRP42Q03776 IMP2'YIL154C 1041 nt14.67□□□□□ -0.06
PRP42Q03776 YLR236CYLR236C 324 nt14.67□□□□□ -0.06
PRP42Q03776 YCH1YGR203W 447 nt14.63□□□□□ -0.07
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms