RNA–Protein interactions for RNA: YKL046C

DCW1, Transcript of Putative mannosidase, yeast

Gene DCW1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DCW1	YKL046C	TLG2	Q08144	397 aa		13.85	□□□□□ -0.19
DCW1	YKL046C	MSH1	P25846	959 aa		13.84	□□□□□ -0.19
DCW1	YKL046C	BDF1	P35817	686 aa		13.84	□□□□□ -0.19
DCW1	YKL046C	TOS1	P38288	455 aa		13.84	□□□□□ -0.19
DCW1	YKL046C	ATG3	P40344	310 aa		13.84	□□□□□ -0.19
DCW1	YKL046C	NDC80	P40460	691 aa		13.84	□□□□□ -0.19
DCW1	YKL046C	MVP1	P40959	511 aa	Known RBP	13.84	□□□□□ -0.19
DCW1	YKL046C	FYV8	P46949	817 aa	Known RBP	13.84	□□□□□ -0.19
DCW1	YKL046C	MAL13	P53338	473 aa		13.84	□□□□□ -0.19
DCW1	YKL046C	RTC4	P53850	401 aa		13.84	□□□□□ -0.19
DCW1	YKL046C	RPT6	Q01939	405 aa	Known RBP	13.84	□□□□□ -0.19
DCW1	YKL046C	SPP382	Q06411	708 aa	Predicted RBP	13.84	□□□□□ -0.19
DCW1	YKL046C	YPL260W	Q08977	551 aa		13.84	□□□□□ -0.19
DCW1	YKL046C	RPG1	P38249	964 aa	Known RBP	13.83	□□□□□ -0.19
DCW1	YKL046C	HFM1	P51979	1187 aa		13.83	□□□□□ -0.19
DCW1	YKL046C	SAS4	Q04003	481 aa		13.83	□□□□□ -0.19
DCW1	YKL046C	RRP1	P35178	278 aa	Predicted RBP	13.83	□□□□□ -0.2
DCW1	YKL046C	STT3	P39007	718 aa	Known RBP	13.83	□□□□□ -0.2
DCW1	YKL046C	YGR153W	P48238	217 aa		13.83	□□□□□ -0.2
DCW1	YKL046C	YOL075C	Q08234	1294 aa		13.83	□□□□□ -0.2
DCW1	YKL046C	CIT1	P00890	479 aa		13.82	□□□□□ -0.2
DCW1	YKL046C	SRP54	P20424	541 aa	Known RBP	13.82	□□□□□ -0.2
DCW1	YKL046C	SHQ1	P40486	507 aa	Predicted RBP	13.82	□□□□□ -0.2
DCW1	YKL046C	EFM4	P40516	257 aa		13.82	□□□□□ -0.2
DCW1	YKL046C	JJJ2	P46997	583 aa		13.82	□□□□□ -0.2
DCW1	YKL046C	SMC3	P47037	1230 aa		13.82	□□□□□ -0.2
DCW1	YKL046C	YGR130C	P53278	816 aa		13.82	□□□□□ -0.2
DCW1	YKL046C	WRS1	Q12109	432 aa	Known RBP	13.82	□□□□□ -0.2
DCW1	YKL046C	PSF3	Q12146	194 aa		13.82	□□□□□ -0.2
DCW1	YKL046C	RRP6	Q12149	733 aa	Known RBP	13.82	□□□□□ -0.2
DCW1	YKL046C	GIN4	Q12263	1142 aa		13.82	□□□□□ -0.2
DCW1	YKL046C	SPO12	P17123	173 aa		13.81	□□□□□ -0.2
DCW1	YKL046C	SIT4	P20604	311 aa		13.81	□□□□□ -0.2
DCW1	YKL046C	MCX1	P38323	520 aa	Predicted RBP	13.81	□□□□□ -0.2
DCW1	YKL046C	CCT4	P39078	528 aa	Known RBP	13.81	□□□□□ -0.2
DCW1	YKL046C	BUD16	P39988	312 aa		13.81	□□□□□ -0.2
DCW1	YKL046C	TRS120	Q04183	1289 aa		13.81	□□□□□ -0.2
DCW1	YKL046C	GYL1	Q04322	720 aa		13.81	□□□□□ -0.2
DCW1	YKL046C	VAC14	Q06708	880 aa		13.81	□□□□□ -0.2
DCW1	YKL046C	THR4	P16120	514 aa	Known RBP	13.8	□□□□□ -0.2
DCW1	YKL046C	RPO26	P20435	155 aa		13.8	□□□□□ -0.2
DCW1	YKL046C	YEL043W	P32618	956 aa		13.8	□□□□□ -0.2
DCW1	YKL046C	VFA1	P40080	203 aa		13.8	□□□□□ -0.2
DCW1	YKL046C	THI6	P41835	540 aa		13.8	□□□□□ -0.2
DCW1	YKL046C	UBA2	P52488	636 aa		13.8	□□□□□ -0.2
DCW1	YKL046C	PRP42	Q03776	544 aa	Known RBP	13.8	□□□□□ -0.2
DCW1	YKL046C	IRC3	Q06683	689 aa		13.8	□□□□□ -0.2
DCW1	YKL046C	DSE3	Q08729	430 aa		13.8	□□□□□ -0.2
DCW1	YKL046C	MTF2	P10849	440 aa		13.79	□□□□□ -0.2
DCW1	YKL046C	MAK11	P20484	414 aa	Known RBP	13.79	□□□□□ -0.2
DCW1	YKL046C	RPC25	P35718	212 aa		13.79	□□□□□ -0.2
DCW1	YKL046C	RET3	P53600	189 aa		13.79	□□□□□ -0.2
DCW1	YKL046C	MRS2	Q01926	470 aa		13.79	□□□□□ -0.2
DCW1	YKL046C	YMR074C	Q04773	145 aa		13.79	□□□□□ -0.2
DCW1	YKL046C	YAP7	Q08182	245 aa		13.79	□□□□□ -0.2
DCW1	YKL046C	NEW1	Q08972	1196 aa	Known RBP	13.79	□□□□□ -0.2
DCW1	YKL046C	RAD57	P25301	460 aa		13.78	□□□□□ -0.2
DCW1	YKL046C	TOM71	P38825	639 aa	Known RBP	13.78	□□□□□ -0.2
DCW1	YKL046C	HPC2	Q01448	625 aa		13.78	□□□□□ -0.2
DCW1	YKL046C	UME1	Q03010	460 aa		13.78	□□□□□ -0.2
DCW1	YKL046C	UBX2	Q04228	584 aa		13.78	□□□□□ -0.2
DCW1	YKL046C	YLR287C	Q05881	355 aa		13.78	□□□□□ -0.2
DCW1	YKL046C	ATG23	Q06671	453 aa		13.78	□□□□□ -0.2
DCW1	YKL046C	RPL8B	P29453	256 aa	Known RBP	13.77	□□□□□ -0.21
DCW1	YKL046C	VPS41	P38959	992 aa		13.77	□□□□□ -0.21
DCW1	YKL046C	VPS8	P39702	1274 aa		13.77	□□□□□ -0.21
DCW1	YKL046C	TIF4632	P39936	914 aa	Known RBP	13.77	□□□□□ -0.21
DCW1	YKL046C	SET4	P42948	560 aa		13.77	□□□□□ -0.21
DCW1	YKL046C	VTC2	P43585	828 aa		13.77	□□□□□ -0.21
DCW1	YKL046C	CWC2	Q12046	339 aa	Predicted RBP	13.77	□□□□□ -0.21
DCW1	YKL046C	TUF1	P02992	437 aa	Known RBP	13.76	□□□□□ -0.21
DCW1	YKL046C	SMD2	Q06217	110 aa	Known RBP	13.76	□□□□□ -0.21
DCW1	YKL046C	SLK19	Q08581	821 aa	Known RBP	13.76	□□□□□ -0.21
DCW1	YKL046C	FOB1	O13329	566 aa		13.75	□□□□□ -0.21
DCW1	YKL046C	DEP1	P31385	405 aa		13.75	□□□□□ -0.21
DCW1	YKL046C	SMF1	P38925	575 aa		13.75	□□□□□ -0.21
DCW1	YKL046C	APL6	P46682	809 aa		13.75	□□□□□ -0.21
DCW1	YKL046C	MDM1	Q01846	1127 aa		13.75	□□□□□ -0.21
DCW1	YKL046C	PPR1	P07272	904 aa	Predicted RBP	13.74	□□□□□ -0.21
DCW1	YKL046C	PRI1	P10363	409 aa		13.74	□□□□□ -0.21
DCW1	YKL046C	ACE2	P21192	770 aa		13.74	□□□□□ -0.21
DCW1	YKL046C	UBP1	P25037	809 aa		13.74	□□□□□ -0.21
DCW1	YKL046C	CLB5	P30283	435 aa		13.74	□□□□□ -0.21
DCW1	YKL046C	PET10	P36139	283 aa		13.74	□□□□□ -0.21
DCW1	YKL046C	CCT3	P39077	534 aa	Known RBP	13.74	□□□□□ -0.21
DCW1	YKL046C	ATG32	P40458	529 aa		13.74	□□□□□ -0.21
DCW1	YKL046C	CTK3	P46963	296 aa	Predicted RBP	13.74	□□□□□ -0.21
DCW1	YKL046C	SDA1	P53313	767 aa	Known RBP	13.74	□□□□□ -0.21
DCW1	YKL046C	NGL3	Q03210	505 aa		13.74	□□□□□ -0.21
DCW1	YKL046C	YPL216W	Q08964	1102 aa		13.74	□□□□□ -0.21
DCW1	YKL046C	KEL3	Q08979	651 aa	Predicted RBP	13.74	□□□□□ -0.21
DCW1	YKL046C	PFF1	P38244	976 aa		13.73	□□□□□ -0.21
DCW1	YKL046C	UTP5	Q04177	643 aa	Known RBP	13.73	□□□□□ -0.21
DCW1	YKL046C	ADY4	Q05955	493 aa		13.73	□□□□□ -0.21
DCW1	YKL046C	OSH2	Q12451	1283 aa		13.73	□□□□□ -0.21
DCW1	YKL046C	GSC2	P40989	1895 aa		13.73	□□□□□ -0.21
DCW1	YKL046C	ARG82	P07250	355 aa		13.72	□□□□□ -0.21
DCW1	YKL046C	MIP1	P15801	1254 aa		13.72	□□□□□ -0.21
DCW1	YKL046C	RET1	P22276	1149 aa	Known RBP	13.72	□□□□□ -0.21
DCW1	YKL046C	PDC6	P26263	563 aa	Known RBP	13.72	□□□□□ -0.21

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms