RNA–Protein interactions for RNA: YDL048C

STP4, Transcript of Protein containing a Kruppel-type zinc-finger domain, yeast

Gene STP4, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STP4	YDL048C	COG4	Q06096	861 aa		5.53	□□□□□ -1.52
STP4	YDL048C	MSB1	P21339	1137 aa	Known RBP	5.52	□□□□□ -1.53
STP4	YDL048C	MSM1	P22438	575 aa		5.52	□□□□□ -1.53
STP4	YDL048C	TSR4	P25040	408 aa		5.52	□□□□□ -1.53
STP4	YDL048C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.52	□□□□□ -1.53	not detected
STP4	YDL048C	QDR1	P40475	563 aa		5.52	□□□□□ -1.53
STP4	YDL048C	FAF1	P40546	346 aa	Predicted RBP	5.52	□□□□□ -1.53
STP4	YDL048C	TAN1	P53072	289 aa	Predicted RBP	5.52	□□□□□ -1.53
STP4	YDL048C	KAR5	Q04746	504 aa		5.52	□□□□□ -1.53
STP4	YDL048C	NFU1	P32860	256 aa		5.51	□□□□□ -1.53
STP4	YDL048C	SEA4	P38164	1038 aa		5.51	□□□□□ -1.53
STP4	YDL048C	VID30	P53076	958 aa		5.51	□□□□□ -1.53
STP4	YDL048C	BNI5	P53890	448 aa	Known RBP	5.51	□□□□□ -1.53
STP4	YDL048C	CTF4	Q01454	927 aa		5.51	□□□□□ -1.53
STP4	YDL048C	JIP5	Q06214	492 aa	Predicted RBP	5.51	□□□□□ -1.53
STP4	YDL048C	GIC2	Q06648	383 aa		5.51	□□□□□ -1.53
STP4	YDL048C	YOL057W	Q08225	711 aa		5.51	□□□□□ -1.53
STP4	YDL048C	SGT2	Q12118	346 aa	Known RBP	5.51	□□□□□ -1.53
STP4	YDL048C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.51	□□□□□ -1.53	not detected
STP4	YDL048C	VPS5	Q92331	675 aa		5.51	□□□□□ -1.53
STP4	YDL048C	RPL5	P26321	297 aa	Known RBP	5.51	□□□□□ -1.53
STP4	YDL048C	STE5	P32917	917 aa		5.51	□□□□□ -1.53
STP4	YDL048C	MAL31	P38156	614 aa		5.51	□□□□□ -1.53
STP4	YDL048C	MSH4	P40965	878 aa	Predicted RBP	5.51	□□□□□ -1.53
STP4	YDL048C	SSF2	Q12153	453 aa	Predicted RBP	5.51	□□□□□ -1.53
STP4	YDL048C	SNU66	Q12420	587 aa	Predicted RBP	5.51	□□□□□ -1.53
STP4	YDL048C	CEX1	Q12453	761 aa		5.51	□□□□□ -1.53
STP4	YDL048C	SAC3	P46674	1301 aa		5.5	□□□□□ -1.53
STP4	YDL048C	KAR1	P11927	433 aa		5.5	□□□□□ -1.53
STP4	YDL048C	HEM3	P28789	327 aa		5.5	□□□□□ -1.53
STP4	YDL048C	PPH3	P32345	308 aa		5.5	□□□□□ -1.53
STP4	YDL048C	RIA1	P53893	1110 aa		5.5	□□□□□ -1.53
STP4	YDL048C	UFD2	P54860	961 aa		5.5	□□□□□ -1.53
STP4	YDL048C	DNM1	P54861	757 aa		5.5	□□□□□ -1.53
STP4	YDL048C	SDH1	Q00711	640 aa		5.5	□□□□□ -1.53
STP4	YDL048C	MDM1	Q01846	1127 aa		5.5	□□□□□ -1.53
STP4	YDL048C	YMR074C	Q04773	145 aa		5.5	□□□□□ -1.53
STP4	YDL048C	DUR3	P33413	735 aa		5.49	□□□□□ -1.53
STP4	YDL048C	YMR124W	P39523	943 aa	Known RBP	5.49	□□□□□ -1.53
STP4	YDL048C	RSC8	P43609	557 aa	Known RBP	5.49	□□□□□ -1.53
STP4	YDL048C	BFA1	P47113	574 aa		5.49	□□□□□ -1.53
STP4	YDL048C	NNF1	P47149	201 aa		5.49	□□□□□ -1.53
STP4	YDL048C	RNH70	P53331	553 aa		5.49	□□□□□ -1.53
STP4	YDL048C	RPL34A	P87262	121 aa	Predicted RBP	5.49	□□□□□ -1.53
STP4	YDL048C	RSC4	Q02206	625 aa		5.49	□□□□□ -1.53
STP4	YDL048C	VTC3	Q02725	835 aa		5.49	□□□□□ -1.53
STP4	YDL048C	PRP3	Q03338	469 aa	Predicted RBP	5.49	□□□□□ -1.53
STP4	YDL048C	GGA1	Q06336	557 aa		5.49	□□□□□ -1.53
STP4	YDL048C	YOR223W	Q12015	292 aa		5.49	□□□□□ -1.53
STP4	YDL048C	SUP35	P05453	685 aa	Known RBP	5.48	□□□□□ -1.53
STP4	YDL048C	SWI3	P32591	825 aa		5.48	□□□□□ -1.53
STP4	YDL048C	LTV1	P34078	463 aa		5.48	□□□□□ -1.53
STP4	YDL048C	RIM11	P38615	370 aa		5.48	□□□□□ -1.53
STP4	YDL048C	ATG1	P53104	897 aa		5.48	□□□□□ -1.53
STP4	YDL048C	RPN7	Q06103	429 aa	Known RBP	5.48	□□□□□ -1.53
STP4	YDL048C	NKP1	Q12493	238 aa		5.48	□□□□□ -1.53
STP4	YDL048C	SEC3	P33332	1336 aa	Known RBP	5.47	□□□□□ -1.53
STP4	YDL048C	GCD1	P09032	578 aa	Predicted RBP	5.47	□□□□□ -1.53
STP4	YDL048C	SSB1	P11484	613 aa	Known RBP	5.47	□□□□□ -1.53
STP4	YDL048C	BRF1	P29056	596 aa		5.47	□□□□□ -1.53
STP4	YDL048C	GPT2	P36148	743 aa		5.47	□□□□□ -1.53
STP4	YDL048C	PES4	P39684	611 aa		5.47	□□□□□ -1.53
STP4	YDL048C	SSB2	P40150	613 aa	Known RBP	5.47	□□□□□ -1.53
STP4	YDL048C	GPI8	P49018	411 aa		5.47	□□□□□ -1.53
STP4	YDL048C	RIX7	Q07844	837 aa	Known RBP	5.47	□□□□□ -1.53
STP4	YDL048C	APC5	Q08683	685 aa		5.47	□□□□□ -1.53
STP4	YDL048C	CMR1	Q12510	522 aa	Known RBP	5.47	□□□□□ -1.53
STP4	YDL048C	CYB2	P00175	591 aa		5.46	□□□□□ -1.53
STP4	YDL048C	NPR1	P22211	790 aa		5.46	□□□□□ -1.53
STP4	YDL048C	DEP1	P31385	405 aa		5.46	□□□□□ -1.53
STP4	YDL048C	RPN12	P32496	274 aa		5.46	□□□□□ -1.53
STP4	YDL048C	TFC3	P34111	1160 aa		5.46	□□□□□ -1.53
STP4	YDL048C	MEP1	P40260	492 aa		5.46	□□□□□ -1.53
STP4	YDL048C	KEL2	P50090	882 aa		5.46	□□□□□ -1.53
STP4	YDL048C	SRP1	Q02821	542 aa	Known RBP	5.46	□□□□□ -1.53
STP4	YDL048C	AOS1	Q06624	347 aa		5.46	□□□□□ -1.53
STP4	YDL048C	CHD1	P32657	1468 aa		5.45	□□□□□ -1.54
STP4	YDL048C	CLN1	P20437	546 aa		5.45	□□□□□ -1.54
STP4	YDL048C	ELM1	P32801	640 aa		5.45	□□□□□ -1.54
STP4	YDL048C	WHI3	P34761	661 aa	Known RBP	5.45	□□□□□ -1.54
STP4	YDL048C	PPX1	P38698	397 aa		5.45	□□□□□ -1.54
STP4	YDL048C	GCV1	P48015	400 aa		5.45	□□□□□ -1.54
STP4	YDL048C	YNL058C	P53947	316 aa		5.45	□□□□□ -1.54
STP4	YDL048C	DOT1	Q04089	582 aa	Known RBP	5.45	□□□□□ -1.54
STP4	YDL048C	PHM6	Q05637	104 aa		5.45	□□□□□ -1.54
STP4	YDL048C	YIG1	Q08956	461 aa		5.45	□□□□□ -1.54
STP4	YDL048C	HTS1	P07263	546 aa	Known RBP	5.45	□□□□□ -1.54
STP4	YDL048C	BYE1	P36106	594 aa		5.45	□□□□□ -1.54
STP4	YDL048C	ECM2	P38241	364 aa	Known RBP	5.45	□□□□□ -1.54
STP4	YDL048C	MMM1	P41800	426 aa		5.45	□□□□□ -1.54
STP4	YDL048C	ACF4	P47129	309 aa		5.45	□□□□□ -1.54
STP4	YDL048C	MNL2	Q12205	849 aa		5.45	□□□□□ -1.54
STP4	YDL048C	PRP5	P21372	849 aa	Predicted RBP	5.44	□□□□□ -1.54
STP4	YDL048C	PPG1	P32838	368 aa		5.44	□□□□□ -1.54
STP4	YDL048C	YHR218W	P38899	603 aa		5.44	□□□□□ -1.54
STP4	YDL048C	ELA1	P53861	379 aa	Predicted RBP	5.44	□□□□□ -1.54
STP4	YDL048C	TRS120	Q04183	1289 aa		5.44	□□□□□ -1.54
STP4	YDL048C	NSE3	Q05541	303 aa		5.44	□□□□□ -1.54
STP4	YDL048C	RRP15	Q06511	250 aa	Predicted RBP	5.44	□□□□□ -1.54
STP4	YDL048C	YVC1	Q12324	675 aa		5.44	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 284.4 ms