Protein–RNA interactions for Protein: P43609

RSC8, Chromatin structure-remodeling complex protein RSC8, yeastyeast

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC8P43609 YML009W-BYML009W-B 477 nt22.07■■□□□ 1.12
RSC8P43609 NOP1YDL014W 984 nt21.76■■□□□ 1.07
RSC8P43609 NSR1YGR159C 1245 nt21.4■■□□□ 1.02
RSC8P43609 YKL036CYKL036C 393 nt20.63■□□□□ 0.89
RSC8P43609 YJL027CYJL027C 417 nt19.37■□□□□ 0.69
RSC8P43609 Q0297Q0297 156 nt19.2■□□□□ 0.66
RSC8P43609 SCS3YGL126W 1143 nt19.04■□□□□ 0.64
RSC8P43609 SRX1YKL086W 384 nt18.97■□□□□ 0.63
RSC8P43609 MDJ1YFL016C 1536 nt18.36■□□□□ 0.53
RSC8P43609 YCR051WYCR051W 669 nt18.06■□□□□ 0.48
RSC8P43609 YOL085CYOL085C 342 nt17.82■□□□□ 0.44
RSC8P43609 SCJ1YMR214W 1134 nt17.71■□□□□ 0.43
RSC8P43609 PKP1YIL042C 1185 nt17.46■□□□□ 0.39
RSC8P43609 RPP1BYDL130W 321 nt17.24■□□□□ 0.35
RSC8P43609 ATS1YAL020C 1002 nt17.23■□□□□ 0.35
RSC8P43609 TRN1tP(UGG)A 72 nt16.76■□□□□ 0.27
RSC8P43609 SUF9tP(UGG)F 72 nt16.76■□□□□ 0.27
RSC8P43609 SUF8tP(UGG)H 72 nt16.76■□□□□ 0.27
RSC8P43609 tP(UGG)LtP(UGG)L 72 nt16.76■□□□□ 0.27
RSC8P43609 SUF7tP(UGG)M 72 nt16.76■□□□□ 0.27
RSC8P43609 tP(UGG)N1tP(UGG)N1 72 nt16.76■□□□□ 0.27
RSC8P43609 tP(UGG)N2tP(UGG)N2 72 nt16.76■□□□□ 0.27
RSC8P43609 tP(UGG)O1tP(UGG)O1 72 nt16.76■□□□□ 0.27
RSC8P43609 SUF11tP(UGG)O2 72 nt16.76■□□□□ 0.27
RSC8P43609 CCC1YLR220W 969 nt16.61■□□□□ 0.25
RSC8P43609 DBP2YNL112W 1641 nt16.46■□□□□ 0.23
RSC8P43609 SCR1SCR1 522 nt16.43■□□□□ 0.22
RSC8P43609 PET122YER153C 765 nt16.37■□□□□ 0.21
RSC8P43609 tP(UGG)O3tP(UGG)O3 72 nt16.08■□□□□ 0.16
RSC8P43609 SSA3YBL075C 1950 nt16.07■□□□□ 0.16
RSC8P43609 RTC3YHR087W 336 nt16.06■□□□□ 0.16
RSC8P43609 RRN5YLR141W 1092 nt15.97■□□□□ 0.15
RSC8P43609 RSB1YOR049C 1065 nt15.85■□□□□ 0.13
RSC8P43609 PST2YDR032C 597 nt15.83■□□□□ 0.12
RSC8P43609 RVS167YDR388W 1449 nt15.74■□□□□ 0.11
RSC8P43609 YER088W-BYER088W-B 147 nt15.66■□□□□ 0.1
RSC8P43609 YKL097CYKL097C 411 nt15.57■□□□□ 0.08
RSC8P43609 YDJ1YNL064C 1230 nt15.56■□□□□ 0.08
RSC8P43609 YBR190WYBR190W 312 nt15.53■□□□□ 0.08
RSC8P43609 SHR5YOL110W 714 nt15.3■□□□□ 0.04
RSC8P43609 GAR1YHR089C 618 nt15.1■□□□□ 0.01
RSC8P43609 SHU1YHL006C 453 nt15.03■□□□□ -0
RSC8P43609 YOR139CYOR139C 393 nt14.78□□□□□ -0.04
RSC8P43609 DEP1YAL013W 1218 nt14.63□□□□□ -0.07
RSC8P43609 YAL037C-BYAL037C-B 975 nt14.6□□□□□ -0.07
RSC8P43609 NPL3YDR432W 1245 nt14.59□□□□□ -0.07
RSC8P43609 TIR1YER011W 765 nt14.57□□□□□ -0.08
RSC8P43609 YNL208WYNL208W 600 nt14.51□□□□□ -0.09
RSC8P43609 URN1YPR152C 1398 nt14.47□□□□□ -0.09
RSC8P43609 RPN10YHR200W 807 nt14.47□□□□□ -0.09
RSC8P43609 SSA1YAL005C 1929 nt14.22□□□□□ -0.13
RSC8P43609 PUT4YOR348C 1884 nt14.2□□□□□ -0.14
RSC8P43609 YOL037CYOL037C 354 nt14.19□□□□□ -0.14
RSC8P43609 YGR021WYGR021W 873 nt14.18□□□□□ -0.14
RSC8P43609 tM(CAU)CtM(CAU)C 72 nt14.17□□□□□ -0.14
RSC8P43609 IMT4tM(CAU)E 72 nt14.17□□□□□ -0.14
RSC8P43609 IMT3tM(CAU)J3 72 nt14.17□□□□□ -0.14
RSC8P43609 IMT1tM(CAU)O1 72 nt14.17□□□□□ -0.14
RSC8P43609 IMT2tM(CAU)P 72 nt14.17□□□□□ -0.14
RSC8P43609 OPI9YLR338W 858 nt14.13□□□□□ -0.15
RSC8P43609 MNP1YGL068W 585 nt14.12□□□□□ -0.15
RSC8P43609 HOM6YJR139C 1080 nt14.11□□□□□ -0.15
RSC8P43609 SRB2YHR041C 633 nt14.05□□□□□ -0.16
RSC8P43609 WWM1YFL010C 636 nt14.01□□□□□ -0.17
RSC8P43609 RKM5YLR137W 1104 nt13.92□□□□□ -0.18
RSC8P43609 BSC6YOL137W 1494 nt13.9□□□□□ -0.18
RSC8P43609 MOT3YMR070W 1473 nt13.89□□□□□ -0.19
RSC8P43609 Q0182Q0182 405 nt13.88□□□□□ -0.19
RSC8P43609 PUS2YGL063W 1113 nt13.87□□□□□ -0.19
RSC8P43609 SAH1YER043C 1350 nt13.86□□□□□ -0.19
RSC8P43609 YJR018WYJR018W 363 nt13.86□□□□□ -0.19
RSC8P43609 YFL021C-AYFL021C-A 855 nt13.82□□□□□ -0.2
RSC8P43609 RPP2BYDR382W 333 nt13.8□□□□□ -0.2
RSC8P43609 YLR281CYLR281C 468 nt13.78□□□□□ -0.2
RSC8P43609 PUN1YLR414C 792 nt13.76□□□□□ -0.21
RSC8P43609 ARE1YCR048W 1833 nt13.76□□□□□ -0.21
RSC8P43609 YJR120WYJR120W 351 nt13.7□□□□□ -0.22
RSC8P43609 POA1YBR022W 534 nt13.69□□□□□ -0.22
RSC8P43609 PAC11YDR488C 1602 nt13.68□□□□□ -0.22
RSC8P43609 NVJ2YPR091C 2313 nt13.65□□□□□ -0.22
RSC8P43609 WHI5YOR083W 888 nt13.65□□□□□ -0.22
RSC8P43609 MRPL8YJL063C 717 nt13.61□□□□□ -0.23
RSC8P43609 BDH2YAL061W 1254 nt13.58□□□□□ -0.24
RSC8P43609 LSM3YLR438C-A 270 nt13.55□□□□□ -0.24
RSC8P43609 YHR049C-AYHR049C-A 297 nt13.54□□□□□ -0.24
RSC8P43609 FMP45YDL222C 930 nt13.52□□□□□ -0.25
RSC8P43609 FPS1YLL043W 2010 nt13.51□□□□□ -0.25
RSC8P43609 SSA4YER103W 1929 nt13.5□□□□□ -0.25
RSC8P43609 PTC2YER089C 1395 nt13.45□□□□□ -0.26
RSC8P43609 YCH1YGR203W 447 nt13.44□□□□□ -0.26
RSC8P43609 DSK2YMR276W 1122 nt13.44□□□□□ -0.26
RSC8P43609 IMP2'YIL154C 1041 nt13.41□□□□□ -0.26
RSC8P43609 SPT5YML010W 3192 nt13.38□□□□□ -0.27
RSC8P43609 ADO1YJR105W 1023 nt13.38□□□□□ -0.27
RSC8P43609 YPR011CYPR011C 981 nt13.38□□□□□ -0.27
RSC8P43609 YLR236CYLR236C 324 nt13.32□□□□□ -0.28
RSC8P43609 INM2YDR287W 879 nt13.31□□□□□ -0.28
RSC8P43609 UBX6YJL048C 1191 nt13.29□□□□□ -0.28
RSC8P43609 YBL100CYBL100C 315 nt13.27□□□□□ -0.29
RSC8P43609 YEL076C-AYEL076C-A 651 nt13.24□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms