RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W YCS4Q06156 1176 aa7.2□□□□□ -1.26
RER1YCL001W AVO1Q08236 1176 aa7.2□□□□□ -1.26
RER1YCL001W NNK1P36003 928 aa7.19□□□□□ -1.26
RER1YCL001W YVC1Q12324 675 aa7.19□□□□□ -1.26
RER1YCL001W PAN1P32521 1480 aa7.18□□□□□ -1.26
RER1YCL001W RNQ1P25367 405 aa7.18□□□□□ -1.26
RER1YCL001W HSP78P33416 811 aa7.18□□□□□ -1.26
RER1YCL001W NIT1P40447 199 aa7.18□□□□□ -1.26
RER1YCL001W TY1B-BRQ12193 1756 aa7.18□□□□□ -1.26
RER1YCL001W TY1B-GR3Q12316 1755 aa7.18□□□□□ -1.26
RER1YCL001W TY1B-ORQ92393 1755 aa7.18□□□□□ -1.26
RER1YCL001W MET5P47169 1442 aa7.18□□□□□ -1.26
RER1YCL001W DNF1P32660 1571 aa7.17□□□□□ -1.26
RER1YCL001W YHL050CP38721 697 aa7.17□□□□□ -1.26
RER1YCL001W NEM1P38757 446 aa7.17□□□□□ -1.26
RER1YCL001W YHR219WP38900 624 aa7.17□□□□□ -1.26
RER1YCL001W SLS1P42900 643 aa7.17□□□□□ -1.26
RER1YCL001W ORC3P54790 616 aa7.17□□□□□ -1.26
RER1YCL001W NOG1Q02892 647 aaKnown RBP7.17□□□□□ -1.26
RER1YCL001W TRE1Q08919 783 aa7.17□□□□□ -1.26
RER1YCL001W RKR1Q04781 1562 aa7.16□□□□□ -1.26
RER1YCL001W ADP1P25371 1049 aa7.16□□□□□ -1.26
RER1YCL001W UBP5P39944 805 aa7.16□□□□□ -1.26
RER1YCL001W PEX7P39108 375 aa7.15□□□□□ -1.26
RER1YCL001W SMC4Q12267 1418 aa7.15□□□□□ -1.27
RER1YCL001W MTR4P47047 1073 aaKnown RBP7.14□□□□□ -1.27
RER1YCL001W YOR1P53049 1477 aa7.14□□□□□ -1.27
RER1YCL001W SSY1Q03770 852 aa7.14□□□□□ -1.27
RER1YCL001W TY2B-BQ12491 1770 aa7.13□□□□□ -1.27
RER1YCL001W MMS22Q06164 1454 aa7.13□□□□□ -1.27
RER1YCL001W PHO4P07270 312 aaKnown RBP7.13□□□□□ -1.27
RER1YCL001W PRP40P33203 583 aaKnown RBP7.13□□□□□ -1.27
RER1YCL001W VPS35P34110 944 aa7.13□□□□□ -1.27
RER1YCL001W SSF1P38789 453 aaPredicted RBP7.13□□□□□ -1.27
RER1YCL001W PRP43P53131 767 aaKnown RBP7.13□□□□□ -1.27
RER1YCL001W PUS7Q08647 676 aaKnown RBP7.13□□□□□ -1.27
RER1YCL001W TY1B-HO13535 1793 aa7.13□□□□□ -1.27
RER1YCL001W TY1B-DR5P0C2I2 1755 aa7.13□□□□□ -1.27
RER1YCL001W TY1B-DR6P0C2I3 1755 aa7.13□□□□□ -1.27
RER1YCL001W TY1B-LR2P0C2I5 1755 aa7.13□□□□□ -1.27
RER1YCL001W TY1B-LR3P0C2I6 1755 aaKnown RBP7.13□□□□□ -1.27
RER1YCL001W TY1B-PR1P0C2I9 1755 aaKnown RBP7.13□□□□□ -1.27
RER1YCL001W TY1B-PR2P0C2J0 1756 aa7.13□□□□□ -1.27
RER1YCL001W TY1B-PR3P0C2J1 1755 aaKnown RBP7.13□□□□□ -1.27
RER1YCL001W TY1B-JR1P47098 1755 aa7.13□□□□□ -1.27
RER1YCL001W TY1B-ML2Q03434 1755 aaKnown RBP7.13□□□□□ -1.27
RER1YCL001W TY1B-ER1Q03612 1755 aa7.13□□□□□ -1.27
RER1YCL001W TY1B-ML1Q04711 1755 aaKnown RBP7.13□□□□□ -1.27
RER1YCL001W TY1B-GR2Q12269 1755 aa7.13□□□□□ -1.27
RER1YCL001W TY1B-OLQ12273 1755 aa7.13□□□□□ -1.27
RER1YCL001W TY1B-PLQ12414 1755 aaKnown RBP7.13□□□□□ -1.27
RER1YCL001W TY1B-DR3Q99231 1755 aa7.13□□□□□ -1.27
RER1YCL001W PRO1P32264 428 aa7.12□□□□□ -1.27
RER1YCL001W GCD6P32501 712 aaKnown RBP7.12□□□□□ -1.27
RER1YCL001W PPX1P38698 397 aa7.12□□□□□ -1.27
RER1YCL001W YAR028WP39548 234 aa7.12□□□□□ -1.27
RER1YCL001W LPX1Q12405 387 aaKnown RBP7.12□□□□□ -1.27
RER1YCL001W GAS1P22146 559 aaKnown RBP7.11□□□□□ -1.27
RER1YCL001W UTP5Q04177 643 aaKnown RBP7.11□□□□□ -1.27
RER1YCL001W ESC1Q03661 1658 aaKnown RBP7.11□□□□□ -1.27
RER1YCL001W STU1P38198 1513 aa7.11□□□□□ -1.27
RER1YCL001W RPA190P10964 1664 aaKnown RBP7.1□□□□□ -1.27
RER1YCL001W KAR2P16474 682 aaKnown RBP7.1□□□□□ -1.27
RER1YCL001W MSH3P25336 1018 aa7.1□□□□□ -1.27
RER1YCL001W TSA1P34760 196 aaKnown RBP7.1□□□□□ -1.27
RER1YCL001W TPP1Q03796 238 aa7.1□□□□□ -1.27
RER1YCL001W CDA2Q06703 312 aa7.1□□□□□ -1.27
RER1YCL001W VMA4P22203 233 aaKnown RBP7.08□□□□□ -1.28
RER1YCL001W MET4P32389 672 aa7.08□□□□□ -1.28
RER1YCL001W UGA4P32837 571 aa7.08□□□□□ -1.28
RER1YCL001W STM1P39015 273 aaKnown RBP7.08□□□□□ -1.28
RER1YCL001W XKS1P42826 600 aa7.08□□□□□ -1.28
RER1YCL001W PEX13P80667 386 aa7.08□□□□□ -1.28
RER1YCL001W ULP1Q02724 621 aa7.08□□□□□ -1.28
RER1YCL001W YLR257WQ06146 321 aaKnown RBP7.08□□□□□ -1.28
RER1YCL001W RET1P22276 1149 aaKnown RBP7.07□□□□□ -1.28
RER1YCL001W PTC7P38797 343 aa7.07□□□□□ -1.28
RER1YCL001W RSM26P47141 266 aa7.07□□□□□ -1.28
RER1YCL001W DAL4Q04895 635 aa7.07□□□□□ -1.28
RER1YCL001W MSC6Q08818 692 aaKnown RBP7.07□□□□□ -1.28
RER1YCL001W HSE1P38753 452 aa7.06□□□□□ -1.28
RER1YCL001W RSA3Q05942 220 aaKnown RBP7.06□□□□□ -1.28
RER1YCL001W LTE1P07866 1435 aa7.06□□□□□ -1.28
RER1YCL001W SPP41P38904 1435 aa7.06□□□□□ -1.28
RER1YCL001W SQT1P35184 431 aa7.05□□□□□ -1.28
RER1YCL001W GTS1P40956 396 aa7.05□□□□□ -1.28
RER1YCL001W DAK2P43550 591 aa7.05□□□□□ -1.28
RER1YCL001W HRK1Q08732 759 aaKnown RBP7.05□□□□□ -1.28
RER1YCL001W LAP2Q10740 671 aa7.05□□□□□ -1.28
RER1YCL001W TRM732Q03496 1420 aa7.04□□□□□ -1.28
RER1YCL001W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
RER1YCL001W SAM35P14693 329 aa7.04□□□□□ -1.28
RER1YCL001W PEX28P38848 579 aa7.04□□□□□ -1.28
RER1YCL001W TOS4Q06266 489 aa7.04□□□□□ -1.28
RER1YCL001W OXR1Q08952 273 aa7.04□□□□□ -1.28
RER1YCL001W WHI5Q12416 295 aa7.04□□□□□ -1.28
RER1YCL001W RDH54P38086 958 aa7.03□□□□□ -1.28
RER1YCL001W YHL012WP38709 493 aa7.03□□□□□ -1.28
RER1YCL001W RKM2Q03942 479 aa7.03□□□□□ -1.28
RER1YCL001W TSC11P40061 1430 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms